data_6RN8 # _model_server_result.job_id suxnt3MikvgcpIxzeMduZw _model_server_result.datetime_utc '2024-11-27 20:10:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rn8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 6RN8 # _exptl.entry_id 6RN8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6RN8 _cell.length_a 132.06 _cell.length_b 132.06 _cell.length_c 107.48 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RN8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O GLU 113 B GLU 112 1_555 D CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? metalc ? metalc2 D CA CA . B CA 401 1_555 G O HOH . B HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc3 D CA CA . B CA 401 1_555 G O HOH . B HOH 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? metalc ? metalc4 D CA CA . B CA 401 1_555 G O HOH . B HOH 518 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? metalc ? metalc5 D CA CA . B CA 401 1_555 G O HOH . B HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6RN8 _atom_sites.fract_transf_matrix[1][1] 0.007572 _atom_sites.fract_transf_matrix[1][2] 0.004372 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008744 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009304 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K9T A 1 401 2 K9T LIG . D 3 CA B 1 401 1 CA CA . E 2 K9T B 1 402 1 K9T LIG . F 4 HOH A 1 501 12 HOH HOH . F 4 HOH A 2 502 131 HOH HOH . F 4 HOH A 3 503 213 HOH HOH . F 4 HOH A 4 504 37 HOH HOH . F 4 HOH A 5 505 46 HOH HOH . F 4 HOH A 6 506 16 HOH HOH . F 4 HOH A 7 507 211 HOH HOH . F 4 HOH A 8 508 27 HOH HOH . F 4 HOH A 9 509 7 HOH HOH . F 4 HOH A 10 510 1 HOH HOH . F 4 HOH A 11 511 94 HOH HOH . F 4 HOH A 12 512 4 HOH HOH . F 4 HOH A 13 513 146 HOH HOH . F 4 HOH A 14 514 240 HOH HOH . F 4 HOH A 15 515 234 HOH HOH . F 4 HOH A 16 516 267 HOH HOH . F 4 HOH A 17 517 19 HOH HOH . F 4 HOH A 18 518 43 HOH HOH . F 4 HOH A 19 519 253 HOH HOH . F 4 HOH A 20 520 109 HOH HOH . F 4 HOH A 21 521 41 HOH HOH . F 4 HOH A 22 522 60 HOH HOH . F 4 HOH A 23 523 17 HOH HOH . F 4 HOH A 24 524 36 HOH HOH . F 4 HOH A 25 525 52 HOH HOH . F 4 HOH A 26 526 238 HOH HOH . F 4 HOH A 27 527 241 HOH HOH . F 4 HOH A 28 528 11 HOH HOH . F 4 HOH A 29 529 297 HOH HOH . F 4 HOH A 30 530 305 HOH HOH . F 4 HOH A 31 531 90 HOH HOH . F 4 HOH A 32 532 268 HOH HOH . F 4 HOH A 33 533 220 HOH HOH . F 4 HOH A 34 534 262 HOH HOH . F 4 HOH A 35 535 239 HOH HOH . F 4 HOH A 36 536 215 HOH HOH . F 4 HOH A 37 537 229 HOH HOH . F 4 HOH A 38 538 259 HOH HOH . F 4 HOH A 39 539 33 HOH HOH . F 4 HOH A 40 540 171 HOH HOH . F 4 HOH A 41 541 92 HOH HOH . F 4 HOH A 42 542 226 HOH HOH . F 4 HOH A 43 543 265 HOH HOH . F 4 HOH A 44 544 13 HOH HOH . F 4 HOH A 45 545 54 HOH HOH . F 4 HOH A 46 546 256 HOH HOH . F 4 HOH A 47 547 47 HOH HOH . F 4 HOH A 48 548 228 HOH HOH . F 4 HOH A 49 549 96 HOH HOH . F 4 HOH A 50 550 107 HOH HOH . F 4 HOH A 51 551 95 HOH HOH . F 4 HOH A 52 552 28 HOH HOH . F 4 HOH A 53 553 180 HOH HOH . F 4 HOH A 54 554 86 HOH HOH . F 4 HOH A 55 555 97 HOH HOH . F 4 HOH A 56 556 183 HOH HOH . F 4 HOH A 57 557 214 HOH HOH . F 4 HOH A 58 558 93 HOH HOH . F 4 HOH A 59 559 35 HOH HOH . F 4 HOH A 60 560 14 HOH HOH . F 4 HOH A 61 561 23 HOH HOH . F 4 HOH A 62 562 53 HOH HOH . F 4 HOH A 63 563 127 HOH HOH . F 4 HOH A 64 564 57 HOH HOH . F 4 HOH A 65 565 230 HOH HOH . F 4 HOH A 66 566 22 HOH HOH . F 4 HOH A 67 567 299 HOH HOH . F 4 HOH A 68 568 125 HOH HOH . F 4 HOH A 69 569 2 HOH HOH . F 4 HOH A 70 570 227 HOH HOH . F 4 HOH A 71 571 164 HOH HOH . F 4 HOH A 72 572 58 HOH HOH . F 4 HOH A 73 573 64 HOH HOH . F 4 HOH A 74 574 61 HOH HOH . F 4 HOH A 75 575 225 HOH HOH . F 4 HOH A 76 576 221 HOH HOH . F 4 HOH A 77 577 135 HOH HOH . F 4 HOH A 78 578 21 HOH HOH . F 4 HOH A 79 579 166 HOH HOH . F 4 HOH A 80 580 31 HOH HOH . F 4 HOH A 81 581 167 HOH HOH . F 4 HOH A 82 582 87 HOH HOH . F 4 HOH A 83 583 251 HOH HOH . F 4 HOH A 84 584 159 HOH HOH . F 4 HOH A 85 585 84 HOH HOH . F 4 HOH A 86 586 157 HOH HOH . F 4 HOH A 87 587 244 HOH HOH . F 4 HOH A 88 588 231 HOH HOH . F 4 HOH A 89 589 48 HOH HOH . F 4 HOH A 90 590 91 HOH HOH . F 4 HOH A 91 591 248 HOH HOH . F 4 HOH A 92 592 115 HOH HOH . F 4 HOH A 93 593 98 HOH HOH . F 4 HOH A 94 594 219 HOH HOH . F 4 HOH A 95 595 59 HOH HOH . F 4 HOH A 96 596 246 HOH HOH . F 4 HOH A 97 597 206 HOH HOH . F 4 HOH A 98 598 112 HOH HOH . F 4 HOH A 99 599 85 HOH HOH . F 4 HOH A 100 600 190 HOH HOH . F 4 HOH A 101 601 237 HOH HOH . F 4 HOH A 102 602 168 HOH HOH . F 4 HOH A 103 603 65 HOH HOH . F 4 HOH A 104 604 224 HOH HOH . F 4 HOH A 105 605 260 HOH HOH . F 4 HOH A 106 606 40 HOH HOH . F 4 HOH A 107 607 6 HOH HOH . F 4 HOH A 108 608 261 HOH HOH . F 4 HOH A 109 609 216 HOH HOH . F 4 HOH A 110 610 156 HOH HOH . F 4 HOH A 111 611 184 HOH HOH . F 4 HOH A 112 612 181 HOH HOH . F 4 HOH A 113 613 89 HOH HOH . F 4 HOH A 114 614 66 HOH HOH . F 4 HOH A 115 615 243 HOH HOH . F 4 HOH A 116 616 147 HOH HOH . F 4 HOH A 117 617 62 HOH HOH . F 4 HOH A 118 618 242 HOH HOH . F 4 HOH A 119 619 236 HOH HOH . F 4 HOH A 120 620 63 HOH HOH . F 4 HOH A 121 621 223 HOH HOH . F 4 HOH A 122 622 15 HOH HOH . F 4 HOH A 123 623 185 HOH HOH . F 4 HOH A 124 624 182 HOH HOH . F 4 HOH A 125 625 116 HOH HOH . F 4 HOH A 126 626 123 HOH HOH . F 4 HOH A 127 627 191 HOH HOH . F 4 HOH A 128 628 257 HOH HOH . F 4 HOH A 129 629 162 HOH HOH . F 4 HOH A 130 630 192 HOH HOH . F 4 HOH A 131 631 264 HOH HOH . F 4 HOH A 132 632 158 HOH HOH . F 4 HOH A 133 633 266 HOH HOH . F 4 HOH A 134 634 129 HOH HOH . F 4 HOH A 135 635 173 HOH HOH . F 4 HOH A 136 636 179 HOH HOH . F 4 HOH A 137 637 83 HOH HOH . F 4 HOH A 138 638 177 HOH HOH . F 4 HOH A 139 639 169 HOH HOH . F 4 HOH A 140 640 187 HOH HOH . F 4 HOH A 141 641 126 HOH HOH . F 4 HOH A 142 642 258 HOH HOH . F 4 HOH A 143 643 178 HOH HOH . F 4 HOH A 144 644 189 HOH HOH . F 4 HOH A 145 645 113 HOH HOH . F 4 HOH A 146 646 235 HOH HOH . F 4 HOH A 147 647 153 HOH HOH . F 4 HOH A 148 648 222 HOH HOH . F 4 HOH A 149 649 26 HOH HOH . F 4 HOH A 150 650 128 HOH HOH . F 4 HOH A 151 651 172 HOH HOH . F 4 HOH A 152 652 233 HOH HOH . F 4 HOH A 153 653 252 HOH HOH . F 4 HOH A 154 654 296 HOH HOH . F 4 HOH A 155 655 186 HOH HOH . F 4 HOH A 156 656 161 HOH HOH . G 4 HOH B 1 501 71 HOH HOH . G 4 HOH B 2 502 106 HOH HOH . G 4 HOH B 3 503 263 HOH HOH . G 4 HOH B 4 504 20 HOH HOH . G 4 HOH B 5 505 80 HOH HOH . G 4 HOH B 6 506 282 HOH HOH . G 4 HOH B 7 507 32 HOH HOH . G 4 HOH B 8 508 269 HOH HOH . G 4 HOH B 9 509 111 HOH HOH . G 4 HOH B 10 510 212 HOH HOH . G 4 HOH B 11 511 204 HOH HOH . G 4 HOH B 12 512 138 HOH HOH . G 4 HOH B 13 513 290 HOH HOH . G 4 HOH B 14 514 45 HOH HOH . G 4 HOH B 15 515 34 HOH HOH . G 4 HOH B 16 516 10 HOH HOH . G 4 HOH B 17 517 25 HOH HOH . G 4 HOH B 18 518 284 HOH HOH . G 4 HOH B 19 519 29 HOH HOH . G 4 HOH B 20 520 298 HOH HOH . G 4 HOH B 21 521 75 HOH HOH . G 4 HOH B 22 522 289 HOH HOH . G 4 HOH B 23 523 9 HOH HOH . G 4 HOH B 24 524 88 HOH HOH . G 4 HOH B 25 525 120 HOH HOH . G 4 HOH B 26 526 249 HOH HOH . G 4 HOH B 27 527 105 HOH HOH . G 4 HOH B 28 528 121 HOH HOH . G 4 HOH B 29 529 176 HOH HOH . G 4 HOH B 30 530 218 HOH HOH . G 4 HOH B 31 531 3 HOH HOH . G 4 HOH B 32 532 193 HOH HOH . G 4 HOH B 33 533 67 HOH HOH . G 4 HOH B 34 534 306 HOH HOH . G 4 HOH B 35 535 81 HOH HOH . G 4 HOH B 36 536 72 HOH HOH . G 4 HOH B 37 537 8 HOH HOH . G 4 HOH B 38 538 110 HOH HOH . G 4 HOH B 39 539 30 HOH HOH . G 4 HOH B 40 540 38 HOH HOH . G 4 HOH B 41 541 255 HOH HOH . G 4 HOH B 42 542 141 HOH HOH . G 4 HOH B 43 543 279 HOH HOH . G 4 HOH B 44 544 280 HOH HOH . G 4 HOH B 45 545 205 HOH HOH . G 4 HOH B 46 546 101 HOH HOH . G 4 HOH B 47 547 300 HOH HOH . G 4 HOH B 48 548 68 HOH HOH . G 4 HOH B 49 549 275 HOH HOH . G 4 HOH B 50 550 5 HOH HOH . G 4 HOH B 51 551 160 HOH HOH . G 4 HOH B 52 552 79 HOH HOH . G 4 HOH B 53 553 49 HOH HOH . G 4 HOH B 54 554 143 HOH HOH . G 4 HOH B 55 555 119 HOH HOH . G 4 HOH B 56 556 108 HOH HOH . G 4 HOH B 57 557 82 HOH HOH . G 4 HOH B 58 558 278 HOH HOH . G 4 HOH B 59 559 104 HOH HOH . G 4 HOH B 60 560 39 HOH HOH . G 4 HOH B 61 561 103 HOH HOH . G 4 HOH B 62 562 174 HOH HOH . G 4 HOH B 63 563 188 HOH HOH . G 4 HOH B 64 564 51 HOH HOH . G 4 HOH B 65 565 277 HOH HOH . G 4 HOH B 66 566 70 HOH HOH . G 4 HOH B 67 567 203 HOH HOH . G 4 HOH B 68 568 130 HOH HOH . G 4 HOH B 69 569 195 HOH HOH . G 4 HOH B 70 570 245 HOH HOH . G 4 HOH B 71 571 198 HOH HOH . G 4 HOH B 72 572 210 HOH HOH . G 4 HOH B 73 573 134 HOH HOH . G 4 HOH B 74 574 44 HOH HOH . G 4 HOH B 75 575 69 HOH HOH . G 4 HOH B 76 576 140 HOH HOH . G 4 HOH B 77 577 148 HOH HOH . G 4 HOH B 78 578 133 HOH HOH . G 4 HOH B 79 579 149 HOH HOH . G 4 HOH B 80 580 77 HOH HOH . G 4 HOH B 81 581 283 HOH HOH . G 4 HOH B 82 582 302 HOH HOH . G 4 HOH B 83 583 99 HOH HOH . G 4 HOH B 84 584 293 HOH HOH . G 4 HOH B 85 585 74 HOH HOH . G 4 HOH B 86 586 194 HOH HOH . G 4 HOH B 87 587 73 HOH HOH . G 4 HOH B 88 588 272 HOH HOH . G 4 HOH B 89 589 209 HOH HOH . G 4 HOH B 90 590 42 HOH HOH . G 4 HOH B 91 591 281 HOH HOH . G 4 HOH B 92 592 247 HOH HOH . G 4 HOH B 93 593 137 HOH HOH . G 4 HOH B 94 594 24 HOH HOH . G 4 HOH B 95 595 295 HOH HOH . G 4 HOH B 96 596 170 HOH HOH . G 4 HOH B 97 597 76 HOH HOH . G 4 HOH B 98 598 18 HOH HOH . G 4 HOH B 99 599 276 HOH HOH . G 4 HOH B 100 600 250 HOH HOH . G 4 HOH B 101 601 102 HOH HOH . G 4 HOH B 102 602 294 HOH HOH . G 4 HOH B 103 603 100 HOH HOH . G 4 HOH B 104 604 78 HOH HOH . G 4 HOH B 105 605 197 HOH HOH . G 4 HOH B 106 606 122 HOH HOH . G 4 HOH B 107 607 208 HOH HOH . G 4 HOH B 108 608 144 HOH HOH . G 4 HOH B 109 609 56 HOH HOH . G 4 HOH B 110 610 196 HOH HOH . G 4 HOH B 111 611 303 HOH HOH . G 4 HOH B 112 612 292 HOH HOH . G 4 HOH B 113 613 155 HOH HOH . G 4 HOH B 114 614 271 HOH HOH . G 4 HOH B 115 615 145 HOH HOH . G 4 HOH B 116 616 124 HOH HOH . G 4 HOH B 117 617 165 HOH HOH . G 4 HOH B 118 618 232 HOH HOH . G 4 HOH B 119 619 254 HOH HOH . G 4 HOH B 120 620 175 HOH HOH . G 4 HOH B 121 621 270 HOH HOH . G 4 HOH B 122 622 139 HOH HOH . G 4 HOH B 123 623 304 HOH HOH . G 4 HOH B 124 624 150 HOH HOH . G 4 HOH B 125 625 273 HOH HOH . G 4 HOH B 126 626 114 HOH HOH . G 4 HOH B 127 627 136 HOH HOH . G 4 HOH B 128 628 286 HOH HOH . G 4 HOH B 129 629 207 HOH HOH . G 4 HOH B 130 630 199 HOH HOH . G 4 HOH B 131 631 288 HOH HOH . G 4 HOH B 132 632 55 HOH HOH . G 4 HOH B 133 633 217 HOH HOH . G 4 HOH B 134 634 152 HOH HOH . G 4 HOH B 135 635 274 HOH HOH . G 4 HOH B 136 636 163 HOH HOH . G 4 HOH B 137 637 285 HOH HOH . G 4 HOH B 138 638 50 HOH HOH . G 4 HOH B 139 639 118 HOH HOH . G 4 HOH B 140 640 202 HOH HOH . G 4 HOH B 141 641 301 HOH HOH . G 4 HOH B 142 642 291 HOH HOH . G 4 HOH B 143 643 117 HOH HOH . G 4 HOH B 144 644 142 HOH HOH . G 4 HOH B 145 645 151 HOH HOH . G 4 HOH B 146 646 132 HOH HOH . G 4 HOH B 147 647 200 HOH HOH . G 4 HOH B 148 648 154 HOH HOH . G 4 HOH B 149 649 287 HOH HOH . G 4 HOH B 150 650 201 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -69.716 _atom_site.Cartn_y 29.828 _atom_site.Cartn_z -21.197 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 61.81 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 401 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #