data_6RPU
#
_model_server_result.job_id            LBYxqAGVraVPy3C5QFtVPg 
_model_server_result.datetime_utc      '2024-11-18 07:35:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6rpu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":604}' 
#
_entry.id    6RPU 
#
_exptl.entry_id    6RPU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              59.044 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ACETATE ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6RPU 
_cell.length_a            148.538 
_cell.length_b            148.538 
_cell.length_c            103.828 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6RPU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        97 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 4 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4,5,6,7,8 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 
4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 
5 'crystal symmetry operation' 5_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 0 0 103.828 
6 'crystal symmetry operation' 6_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 103.828 
7 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 103.828 
8 'crystal symmetry operation' 8_556 -y,-x,-z+1 0 -1 0 -1 0 0 0 0 -1 0 0 103.828 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
? 4 G N N 
#
_chem_comp.formula           'C2 H3 O2 -1' 
_chem_comp.formula_weight    59.044 
_chem_comp.id                ACT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ACETATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O ACT doub 1 n n 
C OXT ACT sing 2 n n 
C CH3 ACT sing 3 n n 
CH3 H1 ACT sing 4 n n 
CH3 H2 ACT sing 5 n n 
CH3 H3 ACT sing 6 n n 
#
_atom_sites.entry_id                     6RPU 
_atom_sites.fract_transf_matrix[1][1]    0.006732 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006732 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009631 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 G5P A 1 601 601 G5P G5P . 
C 3 GDP A 1 602 602 GDP GDP . 
D 4 ACT A 1 603 701 ACT ACT . 
E 4 ACT A 1 604 702 ACT ACT . 
F 4 ACT A 1 605 801 ACT ACT . 
G 4 ACT A 1 606 901 ACT ACT . 
H 5 HOH A 1 701 31 HOH HOH . 
H 5 HOH A 2 702 20 HOH HOH . 
H 5 HOH A 3 703 4 HOH HOH . 
H 5 HOH A 4 704 10 HOH HOH . 
H 5 HOH A 5 705 17 HOH HOH . 
H 5 HOH A 6 706 5 HOH HOH . 
H 5 HOH A 7 707 1 HOH HOH . 
H 5 HOH A 8 708 54 HOH HOH . 
H 5 HOH A 9 709 21 HOH HOH . 
H 5 HOH A 10 710 24 HOH HOH . 
H 5 HOH A 11 711 8 HOH HOH . 
H 5 HOH A 12 712 15 HOH HOH . 
H 5 HOH A 13 713 18 HOH HOH . 
H 5 HOH A 14 714 13 HOH HOH . 
H 5 HOH A 15 715 27 HOH HOH . 
H 5 HOH A 16 716 2 HOH HOH . 
H 5 HOH A 17 717 3 HOH HOH . 
H 5 HOH A 18 718 9 HOH HOH . 
H 5 HOH A 19 719 11 HOH HOH . 
H 5 HOH A 20 720 19 HOH HOH . 
H 5 HOH A 21 721 50 HOH HOH . 
H 5 HOH A 22 722 29 HOH HOH . 
H 5 HOH A 23 723 44 HOH HOH . 
H 5 HOH A 24 724 16 HOH HOH . 
H 5 HOH A 25 725 49 HOH HOH . 
H 5 HOH A 26 726 34 HOH HOH . 
H 5 HOH A 27 727 43 HOH HOH . 
H 5 HOH A 28 728 22 HOH HOH . 
H 5 HOH A 29 729 42 HOH HOH . 
H 5 HOH A 30 730 52 HOH HOH . 
H 5 HOH A 31 731 26 HOH HOH . 
H 5 HOH A 32 732 47 HOH HOH . 
H 5 HOH A 33 733 30 HOH HOH . 
H 5 HOH A 34 734 38 HOH HOH . 
H 5 HOH A 35 735 39 HOH HOH . 
H 5 HOH A 36 736 36 HOH HOH . 
H 5 HOH A 37 737 33 HOH HOH . 
H 5 HOH A 38 738 45 HOH HOH . 
H 5 HOH A 39 739 55 HOH HOH . 
H 5 HOH A 40 740 40 HOH HOH . 
H 5 HOH A 41 741 53 HOH HOH . 
H 5 HOH A 42 742 41 HOH HOH . 
H 5 HOH A 43 743 51 HOH HOH . 
H 5 HOH A 44 744 46 HOH HOH . 
H 5 HOH A 45 745 56 HOH HOH . 
H 5 HOH A 46 746 14 HOH HOH . 
H 5 HOH A 47 747 35 HOH HOH . 
H 5 HOH A 48 748 6 HOH HOH . 
H 5 HOH A 49 749 7 HOH HOH . 
H 5 HOH A 50 750 48 HOH HOH . 
H 5 HOH A 51 751 37 HOH HOH . 
H 5 HOH A 52 752 12 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C ACT . . . E 4 25.31 -20.546 29.842 1 58.62 ? C ACT 604 A 1 
HETATM 2 O O ACT . . . E 4 24.097 -20.355 29.62 1 58.48 ? O ACT 604 A 1 
HETATM 3 O OXT ACT . . . E 4 26.176 -19.786 30.372 1 59.18 ? OXT ACT 604 A 1 
HETATM 4 C CH3 ACT . . . E 4 25.785 -21.89 29.398 1 58.33 ? CH3 ACT 604 A 1 
HETATM 5 H H1 ACT . . . E 4 26.141 -22.374 30.159 1 71.64 ? H1 ACT 604 A 1 
HETATM 6 H H2 ACT . . . E 4 26.48 -21.782 28.729 1 71.64 ? H2 ACT 604 A 1 
HETATM 7 H H3 ACT . . . E 4 25.043 -22.385 29.017 1 71.64 ? H3 ACT 604 A 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           331 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           7 
#