data_6RQA # _model_server_result.job_id j-O8bi2iI63wXnblFBOcaw _model_server_result.datetime_utc '2024-12-21 16:45:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rqa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 6RQA # _exptl.entry_id 6RQA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 158.925 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TERBIUM(III) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6RQA _cell.length_a 50.386 _cell.length_b 72.407 _cell.length_c 164.266 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RQA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 69 A ASP 48 1_555 D TB TB . A TB 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.712 ? metalc ? metalc2 A OD2 ASP 69 A ASP 48 1_555 D TB TB . A TB 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc3 A OE1 GLU 184 A GLU 163 1_555 E TB TB . A TB 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.762 ? metalc ? metalc4 A OE2 GLU 184 A GLU 163 1_555 E TB TB . A TB 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc5 B OD1 ASP 69 B ASP 48 1_555 G TB 7MT . B 7MT 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.844 ? metalc ? metalc6 B OD2 ASP 69 B ASP 48 1_555 G TB 7MT . B 7MT 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.855 ? # _chem_comp.formula 'Tb 3' _chem_comp.formula_weight 158.925 _chem_comp.id TB _chem_comp.mon_nstd_flag . _chem_comp.name 'TERBIUM(III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6RQA _atom_sites.fract_transf_matrix[1][1] 0.019847 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013811 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006088 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 401 350 NAD NAD . D 3 TB A 1 402 370 TB TB . E 3 TB A 1 403 380 TB TB . F 2 NAD B 1 401 350 NAD NAD . G 4 7MT B 1 402 360 7MT 7MT . H 5 HOH A 1 501 41 HOH HOH . H 5 HOH A 2 502 21 HOH HOH . H 5 HOH A 3 503 127 HOH HOH . H 5 HOH A 4 504 49 HOH HOH . H 5 HOH A 5 505 61 HOH HOH . H 5 HOH A 6 506 95 HOH HOH . H 5 HOH A 7 507 97 HOH HOH . H 5 HOH A 8 508 72 HOH HOH . H 5 HOH A 9 509 13 HOH HOH . H 5 HOH A 10 510 46 HOH HOH . H 5 HOH A 11 511 123 HOH HOH . H 5 HOH A 12 512 119 HOH HOH . H 5 HOH A 13 513 3 HOH HOH . H 5 HOH A 14 514 68 HOH HOH . H 5 HOH A 15 515 85 HOH HOH . H 5 HOH A 16 516 10 HOH HOH . H 5 HOH A 17 517 16 HOH HOH . H 5 HOH A 18 518 118 HOH HOH . H 5 HOH A 19 519 94 HOH HOH . H 5 HOH A 20 520 117 HOH HOH . H 5 HOH A 21 521 2 HOH HOH . H 5 HOH A 22 522 33 HOH HOH . H 5 HOH A 23 523 6 HOH HOH . H 5 HOH A 24 524 7 HOH HOH . H 5 HOH A 25 525 25 HOH HOH . H 5 HOH A 26 526 87 HOH HOH . H 5 HOH A 27 527 27 HOH HOH . H 5 HOH A 28 528 102 HOH HOH . H 5 HOH A 29 529 108 HOH HOH . H 5 HOH A 30 530 19 HOH HOH . H 5 HOH A 31 531 12 HOH HOH . H 5 HOH A 32 532 34 HOH HOH . H 5 HOH A 33 533 38 HOH HOH . H 5 HOH A 34 534 45 HOH HOH . H 5 HOH A 35 535 106 HOH HOH . H 5 HOH A 36 536 125 HOH HOH . H 5 HOH A 37 537 15 HOH HOH . H 5 HOH A 38 538 59 HOH HOH . H 5 HOH A 39 539 81 HOH HOH . H 5 HOH A 40 540 103 HOH HOH . H 5 HOH A 41 541 31 HOH HOH . H 5 HOH A 42 542 51 HOH HOH . H 5 HOH A 43 543 73 HOH HOH . H 5 HOH A 44 544 67 HOH HOH . H 5 HOH A 45 545 22 HOH HOH . H 5 HOH A 46 546 63 HOH HOH . H 5 HOH A 47 547 83 HOH HOH . H 5 HOH A 48 548 9 HOH HOH . H 5 HOH A 49 549 52 HOH HOH . H 5 HOH A 50 550 109 HOH HOH . H 5 HOH A 51 551 78 HOH HOH . H 5 HOH A 52 552 77 HOH HOH . H 5 HOH A 53 553 112 HOH HOH . H 5 HOH A 54 554 32 HOH HOH . H 5 HOH A 55 555 30 HOH HOH . H 5 HOH A 56 556 98 HOH HOH . H 5 HOH A 57 557 36 HOH HOH . H 5 HOH A 58 558 105 HOH HOH . H 5 HOH A 59 559 44 HOH HOH . H 5 HOH A 60 560 115 HOH HOH . H 5 HOH A 61 561 53 HOH HOH . H 5 HOH A 62 562 116 HOH HOH . H 5 HOH A 63 563 126 HOH HOH . H 5 HOH A 64 564 58 HOH HOH . H 5 HOH A 65 565 37 HOH HOH . I 5 HOH B 1 501 120 HOH HOH . I 5 HOH B 2 502 35 HOH HOH . I 5 HOH B 3 503 50 HOH HOH . I 5 HOH B 4 504 11 HOH HOH . I 5 HOH B 5 505 76 HOH HOH . I 5 HOH B 6 506 4 HOH HOH . I 5 HOH B 7 507 5 HOH HOH . I 5 HOH B 8 508 55 HOH HOH . I 5 HOH B 9 509 47 HOH HOH . I 5 HOH B 10 510 42 HOH HOH . I 5 HOH B 11 511 56 HOH HOH . I 5 HOH B 12 512 57 HOH HOH . I 5 HOH B 13 513 65 HOH HOH . I 5 HOH B 14 514 69 HOH HOH . I 5 HOH B 15 515 18 HOH HOH . I 5 HOH B 16 516 1 HOH HOH . I 5 HOH B 17 517 8 HOH HOH . I 5 HOH B 18 518 20 HOH HOH . I 5 HOH B 19 519 86 HOH HOH . I 5 HOH B 20 520 29 HOH HOH . I 5 HOH B 21 521 66 HOH HOH . I 5 HOH B 22 522 82 HOH HOH . I 5 HOH B 23 523 75 HOH HOH . I 5 HOH B 24 524 14 HOH HOH . I 5 HOH B 25 525 71 HOH HOH . I 5 HOH B 26 526 89 HOH HOH . I 5 HOH B 27 527 122 HOH HOH . I 5 HOH B 28 528 113 HOH HOH . I 5 HOH B 29 529 48 HOH HOH . I 5 HOH B 30 530 43 HOH HOH . I 5 HOH B 31 531 23 HOH HOH . I 5 HOH B 32 532 28 HOH HOH . I 5 HOH B 33 533 104 HOH HOH . I 5 HOH B 34 534 84 HOH HOH . I 5 HOH B 35 535 26 HOH HOH . I 5 HOH B 36 536 111 HOH HOH . I 5 HOH B 37 537 70 HOH HOH . I 5 HOH B 38 538 110 HOH HOH . I 5 HOH B 39 539 88 HOH HOH . I 5 HOH B 40 540 24 HOH HOH . I 5 HOH B 41 541 17 HOH HOH . I 5 HOH B 42 542 107 HOH HOH . I 5 HOH B 43 543 101 HOH HOH . I 5 HOH B 44 544 92 HOH HOH . I 5 HOH B 45 545 96 HOH HOH . I 5 HOH B 46 546 80 HOH HOH . I 5 HOH B 47 547 39 HOH HOH . I 5 HOH B 48 548 99 HOH HOH . I 5 HOH B 49 549 74 HOH HOH . I 5 HOH B 50 550 93 HOH HOH . I 5 HOH B 51 551 64 HOH HOH . I 5 HOH B 52 552 100 HOH HOH . I 5 HOH B 53 553 54 HOH HOH . I 5 HOH B 54 554 62 HOH HOH . I 5 HOH B 55 555 90 HOH HOH . I 5 HOH B 56 556 40 HOH HOH . I 5 HOH B 57 557 79 HOH HOH . I 5 HOH B 58 558 91 HOH HOH . I 5 HOH B 59 559 114 HOH HOH . I 5 HOH B 60 560 124 HOH HOH . I 5 HOH B 61 561 121 HOH HOH . I 5 HOH B 62 562 60 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol TB _atom_site.label_atom_id TB _atom_site.label_comp_id TB _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 36.775 _atom_site.Cartn_y 1.309 _atom_site.Cartn_z 46.411 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 150.73 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id TB _atom_site.auth_comp_id TB _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #