data_6RQF # _model_server_result.job_id m3yz82637b8o4PSNtmtcng _model_server_result.datetime_utc '2025-03-06 09:30:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rqf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"X","auth_seq_id":201}' # _entry.id 6RQF # _exptl.entry_id 6RQF _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 787.158 _entity.id 15 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6RQF _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RQF _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexadecameric _pdbx_struct_assembly.oligomeric_count 16 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 15 X N N ? 15 RA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 112 L CYS 112 1_555 D SG CYS 127 L CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? disulf ? disulf2 L SG CYS 112 D CYS 112 1_555 L SG CYS 127 D CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? covale ? covale1 A SG CYS 35 I CYS 35 1_555 S CAB HEC . I HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.76 ? metalc ? metalc1 A NE2 HIS 86 I HIS 86 1_555 Q FE HEM . I HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.73 ? metalc ? metalc2 A NE2 HIS 100 I HIS 100 1_555 R FE HEM . I HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.77 ? metalc ? metalc3 A NE2 HIS 187 I HIS 187 1_555 Q FE HEM . I HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? metalc ? metalc4 A NE2 HIS 202 I HIS 202 1_555 R FE HEM . I HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc5 C N TYR 1 K TYR 1 1_555 Z FE HEC . K HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? covale ? covale2 C SG CYS 21 K CYS 21 1_555 Z CBB HEC . K HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.857 ? covale ? covale3 C SG CYS 21 K CYS 21 1_555 Z CAB HEC . K HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? covale ? covale4 C SG CYS 24 K CYS 24 1_555 Z CBC HEC . K HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.71 ? metalc ? metalc6 D SG CYS 107 L CYS 107 1_555 BA FE1 FES . L FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc7 D ND1 HIS 109 L HIS 109 1_555 BA FE2 FES . L FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc8 D SG CYS 125 L CYS 125 1_555 BA FE1 FES . L FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc9 I NE2 HIS 86 A HIS 86 1_555 EA FE HEM . A HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc10 I NE2 HIS 100 A HIS 100 1_555 FA FE HEM . A HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc11 I NE2 HIS 187 A HIS 187 1_555 EA FE HEM . A HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc12 I NE2 HIS 202 A HIS 202 1_555 FA FE HEM . A HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? metalc ? metalc13 K N TYR 1 C TYR 1 1_555 NA FE HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? metalc ? metalc14 K NE2 HIS 25 C HIS 25 1_555 NA FE HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? metalc ? metalc15 L SG CYS 107 D CYS 107 1_555 PA FE1 FES . D FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc16 L ND1 HIS 109 D HIS 109 1_555 PA FE2 FES . D FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc17 L SG CYS 125 D CYS 125 1_555 PA FE1 FES . D FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc18 L ND1 HIS 128 D HIS 128 1_555 PA FE2 FES . D FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? # _chem_comp.formula 'C45 H86 O10' _chem_comp.formula_weight 787.158 _chem_comp.id LMG _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6RQF _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Q 9 HEM I 1 301 6 HEM HEM . R 9 HEM I 1 302 7 HEM HEM . S 10 HEC I 1 303 8 HEC HEM . T 11 CLA I 1 304 1 CLA CLA . U 12 BCR I 1 305 2 BCR BCR . V 13 PL9 I 1 306 2 PL9 PL9 . W 14 6PL I 1 307 3 6PL 6PL . X 15 LMG J 1 201 1 LMG LMG . Y 16 PGV J 1 202 2 PGV PGV . Z 10 HEC K 1 301 2 HEC HEM . AA 16 PGV K 1 302 4 PGV PGV . BA 17 FES L 1 201 2 FES FES . CA 18 SQD L 1 202 1 SQD SQD . DA 14 6PL N 1 101 1 6PL 6PL . EA 9 HEM A 1 301 3 HEM HEM . FA 9 HEM A 1 302 4 HEM HEM . GA 10 HEC A 1 303 5 HEC HEM . HA 11 CLA A 1 304 2 CLA CLA . IA 13 PL9 A 1 305 1 PL9 PL9 . JA 13 PL9 A 1 306 3 PL9 PL9 . KA 18 SQD A 1 307 3 SQD SQD . LA 16 PGV A 1 308 3 PGV PGV . MA 16 PGV B 1 201 1 PGV PGV . NA 10 HEC C 1 301 1 HEC HEM . OA 18 SQD C 1 302 2 SQD SQD . PA 17 FES D 1 201 1 FES FES . QA 14 6PL E 1 101 2 6PL 6PL . RA 15 LMG F 1 101 2 LMG LMG . SA 12 BCR H 1 101 1 BCR BCR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LMG . . . X 15 121.159 140.225 167.617 1 60.8 ? C1 LMG 201 J 1 HETATM 2 O O1 LMG . . . X 15 122.171 140.763 168.403 1 60.8 ? O1 LMG 201 J 1 HETATM 3 C C2 LMG . . . X 15 119.885 141.068 167.946 1 60.8 ? C2 LMG 201 J 1 HETATM 4 O O2 LMG . . . X 15 119.444 140.577 169.175 1 60.8 ? O2 LMG 201 J 1 HETATM 5 C C3 LMG . . . X 15 118.794 140.72 166.885 1 60.8 ? C3 LMG 201 J 1 HETATM 6 O O3 LMG . . . X 15 117.773 141.645 167.101 1 60.8 ? O3 LMG 201 J 1 HETATM 7 C C4 LMG . . . X 15 119.353 140.889 165.446 1 60.8 ? C4 LMG 201 J 1 HETATM 8 O O4 LMG . . . X 15 119.668 142.224 165.246 1 60.8 ? O4 LMG 201 J 1 HETATM 9 C C5 LMG . . . X 15 120.668 140.042 165.357 1 60.8 ? C5 LMG 201 J 1 HETATM 10 O O5 LMG . . . X 15 122.096 139.059 163.801 1 60.8 ? O5 LMG 201 J 1 HETATM 11 C C6 LMG . . . X 15 121.284 140.18 163.959 1 60.8 ? C6 LMG 201 J 1 HETATM 12 O O6 LMG . . . X 15 121.601 140.497 166.3 1 60.8 ? O6 LMG 201 J 1 HETATM 13 C C7 LMG . . . X 15 122.811 139.823 169.22 1 60.8 ? C7 LMG 201 J 1 HETATM 14 C C8 LMG . . . X 15 123.191 140.608 170.485 1 60.8 ? C8 LMG 201 J 1 HETATM 15 C C9 LMG . . . X 15 121.984 140.648 171.415 1 60.8 ? C9 LMG 201 J 1 HETATM 16 O O7 LMG . . . X 15 124.162 139.877 171.168 1 60.8 ? O7 LMG 201 J 1 HETATM 17 C C10 LMG . . . X 15 125.283 140.525 171.545 1 60.8 ? C10 LMG 201 J 1 HETATM 18 O O9 LMG . . . X 15 125.668 141.485 170.893 1 60.8 ? O9 LMG 201 J 1 HETATM 19 C C11 LMG . . . X 15 125.681 140.174 172.928 1 60.8 ? C11 LMG 201 J 1 HETATM 20 C C12 LMG . . . X 15 127.122 140.525 173.137 1 60.8 ? C12 LMG 201 J 1 HETATM 21 C C13 LMG . . . X 15 127.311 141.886 173.742 1 60.8 ? C13 LMG 201 J 1 HETATM 22 C C14 LMG . . . X 15 128.487 141.751 174.668 1 60.8 ? C14 LMG 201 J 1 HETATM 23 C C15 LMG . . . X 15 129.226 143.046 174.716 1 60.8 ? C15 LMG 201 J 1 HETATM 24 C C16 LMG . . . X 15 130.46 142.834 175.534 1 60.8 ? C16 LMG 201 J 1 HETATM 25 C C17 LMG . . . X 15 130.834 144.168 176.054 1 60.8 ? C17 LMG 201 J 1 HETATM 26 C C18 LMG . . . X 15 130.235 144.269 177.414 1 60.8 ? C18 LMG 201 J 1 HETATM 27 C C19 LMG . . . X 15 130.662 145.594 177.979 1 60.8 ? C19 LMG 201 J 1 HETATM 28 C C20 LMG . . . X 15 132.079 145.427 178.424 1 60.8 ? C20 LMG 201 J 1 HETATM 29 C C21 LMG . . . X 15 132.059 144.622 179.678 1 60.8 ? C21 LMG 201 J 1 HETATM 30 C C22 LMG . . . X 15 132.06 145.624 180.77 1 60.8 ? C22 LMG 201 J 1 HETATM 31 C C23 LMG . . . X 15 131.853 144.851 182.026 1 60.8 ? C23 LMG 201 J 1 HETATM 32 C C24 LMG . . . X 15 132.847 145.423 182.969 1 60.8 ? C24 LMG 201 J 1 HETATM 33 C C25 LMG . . . X 15 132.291 146.706 183.491 1 60.8 ? C25 LMG 201 J 1 HETATM 34 C C26 LMG . . . X 15 131.987 146.481 184.949 1 60.8 ? C26 LMG 201 J 1 HETATM 35 C C27 LMG . . . X 15 131.819 147.821 185.616 1 60.8 ? C27 LMG 201 J 1 HETATM 36 O O8 LMG . . . X 15 122.153 139.589 172.327 1 60.8 ? O8 LMG 201 J 1 HETATM 37 C C28 LMG . . . X 15 121.261 139.527 173.343 1 60.8 ? C28 LMG 201 J 1 HETATM 38 O O10 LMG . . . X 15 121.664 139.515 174.498 1 60.8 ? O10 LMG 201 J 1 HETATM 39 C C29 LMG . . . X 15 119.855 139.265 172.9 1 60.8 ? C29 LMG 201 J 1 HETATM 40 C C30 LMG . . . X 15 118.891 140.221 173.559 1 60.8 ? C30 LMG 201 J 1 HETATM 41 C C31 LMG . . . X 15 118.228 139.496 174.704 1 60.8 ? C31 LMG 201 J 1 HETATM 42 C C32 LMG . . . X 15 118.735 140.12 175.989 1 60.8 ? C32 LMG 201 J 1 HETATM 43 C C33 LMG . . . X 15 119.32 139.003 176.808 1 60.8 ? C33 LMG 201 J 1 HETATM 44 C C34 LMG . . . X 15 120.318 139.595 177.759 1 60.8 ? C34 LMG 201 J 1 HETATM 45 C C35 LMG . . . X 15 119.679 139.515 179.133 1 60.8 ? C35 LMG 201 J 1 HETATM 46 C C36 LMG . . . X 15 120.801 139.378 180.111 1 60.8 ? C36 LMG 201 J 1 HETATM 47 C C37 LMG . . . X 15 121.17 140.762 180.577 1 60.8 ? C37 LMG 201 J 1 HETATM 48 C C38 LMG . . . X 15 122.071 140.469 181.72 1 60.8 ? C38 LMG 201 J 1 HETATM 49 C C39 LMG . . . X 15 121.971 141.574 182.722 1 60.8 ? C39 LMG 201 J 1 HETATM 50 C C40 LMG . . . X 15 123.364 141.607 183.279 1 60.8 ? C40 LMG 201 J 1 HETATM 51 C C41 LMG . . . X 15 123.511 140.515 184.303 1 60.8 ? C41 LMG 201 J 1 HETATM 52 C C42 LMG . . . X 15 124.938 140.667 184.772 1 60.8 ? C42 LMG 201 J 1 HETATM 53 C C43 LMG . . . X 15 125.416 139.343 185.292 1 60.8 ? C43 LMG 201 J 1 HETATM 54 C C44 LMG . . . X 15 125.033 139.286 186.76 1 60.8 ? C44 LMG 201 J 1 HETATM 55 C C45 LMG . . . X 15 124.375 137.952 187.002 1 60.8 ? C45 LMG 201 J 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 55 #