data_6RR2
#
_model_server_result.job_id            vjUhIlCu9jPrDz_GQ2BCwQ 
_model_server_result.datetime_utc      '2024-12-02 15:09:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6rr2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    6RR2 
#
_exptl.entry_id    6RR2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              219.243 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            9-[(2~{S})-oxan-2-yl]purin-6-amine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6RR2 
_cell.length_a            62.769 
_cell.length_b            75.474 
_cell.length_c            118.358 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6RR2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E 1 1 
A,B,C,D,E 1 2 
A,B,C,D,E 1 3 
A,B,C,D,E 1 4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 62.769 0 0 
3 'crystal symmetry operation' 3_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 62.769 0 0 
4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H13 N5 O' 
_chem_comp.formula_weight    219.243 
_chem_comp.id                KF5 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              9-[(2~{S})-oxan-2-yl]purin-6-amine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N6 C6 KF5 sing 193 n n 
C6 N1 KF5 doub 194 n y 
C6 C5 KF5 sing 195 n y 
N1 C2 KF5 sing 196 n y 
N7 C5 KF5 sing 197 n y 
N7 C8 KF5 doub 198 n y 
C5 C4 KF5 doub 199 n y 
C2 N3 KF5 doub 200 n y 
CAP CAO KF5 sing 201 n n 
CAP CAK KF5 sing 202 n n 
C8 N9 KF5 sing 203 n y 
C4 N3 KF5 sing 204 n y 
C4 N9 KF5 sing 205 n y 
N9 CAK KF5 sing 206 n n 
CAO CAN KF5 sing 207 n n 
CAK OAL KF5 sing 208 n n 
CAN CAM KF5 sing 209 n n 
OAL CAM KF5 sing 210 n n 
C2 H1 KF5 sing 211 n n 
C8 H2 KF5 sing 212 n n 
CAK H3 KF5 sing 213 n n 
CAM H4 KF5 sing 214 n n 
CAM H5 KF5 sing 215 n n 
CAN H6 KF5 sing 216 n n 
CAN H7 KF5 sing 217 n n 
CAO H8 KF5 sing 218 n n 
CAO H9 KF5 sing 219 n n 
CAP H10 KF5 sing 220 n n 
CAP H11 KF5 sing 221 n n 
N6 H12 KF5 sing 222 n n 
N6 H13 KF5 sing 223 n n 
#
_atom_sites.entry_id                     6RR2 
_atom_sites.fract_transf_matrix[1][1]    0.015931 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01325 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008449 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CIT A 1 301 1 CIT CIT . 
C 3 KF5 A 1 302 1 KF5 9TA . 
D 4 MTA A 1 303 1 MTA MTA . 
E 5 HOH A 1 401 5 HOH HOH . 
E 5 HOH A 2 402 69 HOH HOH . 
E 5 HOH A 3 403 65 HOH HOH . 
E 5 HOH A 4 404 22 HOH HOH . 
E 5 HOH A 5 405 75 HOH HOH . 
E 5 HOH A 6 406 79 HOH HOH . 
E 5 HOH A 7 407 67 HOH HOH . 
E 5 HOH A 8 408 4 HOH HOH . 
E 5 HOH A 9 409 33 HOH HOH . 
E 5 HOH A 10 410 17 HOH HOH . 
E 5 HOH A 11 411 54 HOH HOH . 
E 5 HOH A 12 412 23 HOH HOH . 
E 5 HOH A 13 413 20 HOH HOH . 
E 5 HOH A 14 414 60 HOH HOH . 
E 5 HOH A 15 415 7 HOH HOH . 
E 5 HOH A 16 416 40 HOH HOH . 
E 5 HOH A 17 417 8 HOH HOH . 
E 5 HOH A 18 418 16 HOH HOH . 
E 5 HOH A 19 419 1 HOH HOH . 
E 5 HOH A 20 420 37 HOH HOH . 
E 5 HOH A 21 421 45 HOH HOH . 
E 5 HOH A 22 422 43 HOH HOH . 
E 5 HOH A 23 423 77 HOH HOH . 
E 5 HOH A 24 424 9 HOH HOH . 
E 5 HOH A 25 425 46 HOH HOH . 
E 5 HOH A 26 426 13 HOH HOH . 
E 5 HOH A 27 427 6 HOH HOH . 
E 5 HOH A 28 428 25 HOH HOH . 
E 5 HOH A 29 429 72 HOH HOH . 
E 5 HOH A 30 430 49 HOH HOH . 
E 5 HOH A 31 431 24 HOH HOH . 
E 5 HOH A 32 432 30 HOH HOH . 
E 5 HOH A 33 433 14 HOH HOH . 
E 5 HOH A 34 434 2 HOH HOH . 
E 5 HOH A 35 435 74 HOH HOH . 
E 5 HOH A 36 436 10 HOH HOH . 
E 5 HOH A 37 437 32 HOH HOH . 
E 5 HOH A 38 438 18 HOH HOH . 
E 5 HOH A 39 439 12 HOH HOH . 
E 5 HOH A 40 440 62 HOH HOH . 
E 5 HOH A 41 441 15 HOH HOH . 
E 5 HOH A 42 442 3 HOH HOH . 
E 5 HOH A 43 443 61 HOH HOH . 
E 5 HOH A 44 444 44 HOH HOH . 
E 5 HOH A 45 445 71 HOH HOH . 
E 5 HOH A 46 446 19 HOH HOH . 
E 5 HOH A 47 447 31 HOH HOH . 
E 5 HOH A 48 448 11 HOH HOH . 
E 5 HOH A 49 449 53 HOH HOH . 
E 5 HOH A 50 450 81 HOH HOH . 
E 5 HOH A 51 451 42 HOH HOH . 
E 5 HOH A 52 452 36 HOH HOH . 
E 5 HOH A 53 453 26 HOH HOH . 
E 5 HOH A 54 454 56 HOH HOH . 
E 5 HOH A 55 455 21 HOH HOH . 
E 5 HOH A 56 456 55 HOH HOH . 
E 5 HOH A 57 457 34 HOH HOH . 
E 5 HOH A 58 458 82 HOH HOH . 
E 5 HOH A 59 459 35 HOH HOH . 
E 5 HOH A 60 460 68 HOH HOH . 
E 5 HOH A 61 461 50 HOH HOH . 
E 5 HOH A 62 462 76 HOH HOH . 
E 5 HOH A 63 463 39 HOH HOH . 
E 5 HOH A 64 464 73 HOH HOH . 
E 5 HOH A 65 465 29 HOH HOH . 
E 5 HOH A 66 466 51 HOH HOH . 
E 5 HOH A 67 467 58 HOH HOH . 
E 5 HOH A 68 468 78 HOH HOH . 
E 5 HOH A 69 469 47 HOH HOH . 
E 5 HOH A 70 470 80 HOH HOH . 
E 5 HOH A 71 471 52 HOH HOH . 
E 5 HOH A 72 472 41 HOH HOH . 
E 5 HOH A 73 473 59 HOH HOH . 
E 5 HOH A 74 474 38 HOH HOH . 
E 5 HOH A 75 475 48 HOH HOH . 
E 5 HOH A 76 476 70 HOH HOH . 
E 5 HOH A 77 477 64 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 KF5 . . . C 3 22.317 11.397 12.58 1 44.92 ? C2 KF5 302 A 1 
HETATM 2 C C4 KF5 . . . C 3 20.014 11.279 12.844 1 47.08 ? C4 KF5 302 A 1 
HETATM 3 C C5 KF5 . . . C 3 19.83 12.517 12.245 1 47.25 ? C5 KF5 302 A 1 
HETATM 4 C C6 KF5 . . . C 3 20.942 13.222 11.795 1 46.14 ? C6 KF5 302 A 1 
HETATM 5 C C8 KF5 . . . C 3 17.902 11.724 12.81 1 47.47 ? C8 KF5 302 A 1 
HETATM 6 C CAK KF5 . . . C 3 18.588 9.518 13.843 1 54.14 ? CAK KF5 302 A 1 
HETATM 7 C CAM KF5 . . . C 3 17.031 8.242 15.166 1 58.98 ? CAM KF5 302 A 1 
HETATM 8 C CAN KF5 . . . C 3 17.049 7.099 14.143 1 59.14 ? CAN KF5 302 A 1 
HETATM 9 C CAO KF5 . . . C 3 18.42 7.062 13.486 1 57.83 ? CAO KF5 302 A 1 
HETATM 10 C CAP KF5 . . . C 3 18.65 8.403 12.797 1 56.07 ? CAP KF5 302 A 1 
HETATM 11 N N1 KF5 . . . C 3 22.208 12.653 11.966 1 45.78 ? N1 KF5 302 A 1 
HETATM 12 N N3 KF5 . . . C 3 21.241 10.755 12.997 1 45.16 ? N3 KF5 302 A 1 
HETATM 13 N N6 KF5 . . . C 3 20.813 14.411 11.214 1 45.14 ? N6 KF5 302 A 1 
HETATM 14 N N7 KF5 . . . C 3 18.521 12.761 12.24 1 47.38 ? N7 KF5 302 A 1 
HETATM 15 N N9 KF5 . . . C 3 18.814 10.822 13.176 1 48.47 ? N9 KF5 302 A 1 
HETATM 16 O OAL KF5 . . . C 3 17.291 9.504 14.503 1 57.64 ? OAL KF5 302 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           336 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           16 
#