data_6RSI # _model_server_result.job_id -gZKfZyOd5EKO865HGJ8iw _model_server_result.datetime_utc '2024-11-18 21:27:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rsi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6RSI # _exptl.entry_id 6RSI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 618.503 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6RSI _cell.length_a 101.32 _cell.length_b 101.32 _cell.length_c 86.1 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RSI _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 19 A CYS 14 1_555 B CAB HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.795 ? covale ? covale2 A SG CYS 22 A CYS 17 1_555 B CAC HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.847 ? metalc ? metalc1 A NE2 HIS 23 A HIS 18 1_555 B FE HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc2 B FE HEC . A HEC 201 1_555 H O HOH . A HOH 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE NA HEC sing 294 n n FE NB HEC sing 295 n n FE NC HEC sing 296 n n FE ND HEC sing 297 n n CHA C1A HEC doub 298 n n CHA C4D HEC sing 299 n n CHA HHA HEC sing 300 n n CHB C4A HEC doub 301 n n CHB C1B HEC sing 302 n n CHB HHB HEC sing 303 n n CHC C4B HEC doub 304 n n CHC C1C HEC sing 305 n n CHC HHC HEC sing 306 n n CHD C4C HEC doub 307 n n CHD C1D HEC sing 308 n n CHD HHD HEC sing 309 n n NA C1A HEC sing 310 n y NA C4A HEC sing 311 n y C1A C2A HEC sing 312 n y C2A C3A HEC doub 313 n y C2A CAA HEC sing 314 n n C3A C4A HEC sing 315 n y C3A CMA HEC sing 316 n n CMA HMA1 HEC sing 317 n n CMA HMA2 HEC sing 318 n n CMA HMA3 HEC sing 319 n n CAA CBA HEC sing 320 n n CAA HAA1 HEC sing 321 n n CAA HAA2 HEC sing 322 n n CBA CGA HEC sing 323 n n CBA HBA1 HEC sing 324 n n CBA HBA2 HEC sing 325 n n CGA O1A HEC doub 326 n n CGA O2A HEC sing 327 n n O2A H2A HEC sing 328 n n NB C1B HEC sing 329 n y NB C4B HEC sing 330 n y C1B C2B HEC doub 331 n y C2B C3B HEC sing 332 n y C2B CMB HEC sing 333 n n C3B C4B HEC sing 334 n y C3B CAB HEC doub 335 e n CMB HMB1 HEC sing 336 n n CMB HMB2 HEC sing 337 n n CMB HMB3 HEC sing 338 n n CAB CBB HEC sing 339 n n CAB HAB HEC sing 340 n n CBB HBB1 HEC sing 341 n n CBB HBB2 HEC sing 342 n n CBB HBB3 HEC sing 343 n n NC C1C HEC sing 344 n y NC C4C HEC sing 345 n y C1C C2C HEC doub 346 n y C2C C3C HEC sing 347 n y C2C CMC HEC sing 348 n n C3C C4C HEC sing 349 n y C3C CAC HEC doub 350 e n CMC HMC1 HEC sing 351 n n CMC HMC2 HEC sing 352 n n CMC HMC3 HEC sing 353 n n CAC CBC HEC sing 354 n n CAC HAC HEC sing 355 n n CBC HBC1 HEC sing 356 n n CBC HBC2 HEC sing 357 n n CBC HBC3 HEC sing 358 n n ND C1D HEC sing 359 n y ND C4D HEC sing 360 n y C1D C2D HEC doub 361 n y C2D C3D HEC sing 362 n y C2D CMD HEC sing 363 n n C3D C4D HEC doub 364 n y C3D CAD HEC sing 365 n n CMD HMD1 HEC sing 366 n n CMD HMD2 HEC sing 367 n n CMD HMD3 HEC sing 368 n n CAD CBD HEC sing 369 n n CAD HAD1 HEC sing 370 n n CAD HAD2 HEC sing 371 n n CBD CGD HEC sing 372 n n CBD HBD1 HEC sing 373 n n CBD HBD2 HEC sing 374 n n CGD O1D HEC doub 375 n n CGD O2D HEC sing 376 n n O2D H2D HEC sing 377 n n # _atom_sites.entry_id 6RSI _atom_sites.fract_transf_matrix[1][1] 0.00987 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00987 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011614 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEC A 1 201 201 HEC HEC . C 3 EVB A 1 202 202 EVB EVB . D 3 EVB A 1 203 203 EVB EVB . E 3 EVB A 1 204 204 EVB EVB . F 4 GOL A 1 205 1 GOL GOL . G 4 GOL A 1 206 2 GOL GOL . H 5 HOH A 1 301 33 HOH HOH . H 5 HOH A 2 302 15 HOH HOH . H 5 HOH A 3 303 28 HOH HOH . H 5 HOH A 4 304 19 HOH HOH . H 5 HOH A 5 305 42 HOH HOH . H 5 HOH A 6 306 3 HOH HOH . H 5 HOH A 7 307 4 HOH HOH . H 5 HOH A 8 308 2 HOH HOH . H 5 HOH A 9 309 21 HOH HOH . H 5 HOH A 10 310 30 HOH HOH . H 5 HOH A 11 311 31 HOH HOH . H 5 HOH A 12 312 11 HOH HOH . H 5 HOH A 13 313 62 HOH HOH . H 5 HOH A 14 314 24 HOH HOH . H 5 HOH A 15 315 12 HOH HOH . H 5 HOH A 16 316 50 HOH HOH . H 5 HOH A 17 317 28 HOH HOH . H 5 HOH A 18 318 3 HOH HOH . H 5 HOH A 19 319 6 HOH HOH . H 5 HOH A 20 320 23 HOH HOH . H 5 HOH A 21 321 98 HOH HOH . H 5 HOH A 22 322 14 HOH HOH . H 5 HOH A 23 323 10 HOH HOH . H 5 HOH A 24 324 24 HOH HOH . H 5 HOH A 25 325 6 HOH HOH . H 5 HOH A 26 326 14 HOH HOH . H 5 HOH A 27 327 7 HOH HOH . H 5 HOH A 28 328 9 HOH HOH . H 5 HOH A 29 329 68 HOH HOH . H 5 HOH A 30 330 25 HOH HOH . H 5 HOH A 31 331 58 HOH HOH . H 5 HOH A 32 332 49 HOH HOH . H 5 HOH A 33 333 18 HOH HOH . H 5 HOH A 34 334 69 HOH HOH . H 5 HOH A 35 335 1 HOH HOH . H 5 HOH A 36 336 29 HOH HOH . H 5 HOH A 37 337 93 HOH HOH . H 5 HOH A 38 338 1 HOH HOH . H 5 HOH A 39 339 22 HOH HOH . H 5 HOH A 40 340 26 HOH HOH . H 5 HOH A 41 341 41 HOH HOH . H 5 HOH A 42 342 25 HOH HOH . H 5 HOH A 43 343 5 HOH HOH . H 5 HOH A 44 344 43 HOH HOH . H 5 HOH A 45 345 16 HOH HOH . H 5 HOH A 46 346 92 HOH HOH . H 5 HOH A 47 347 20 HOH HOH . H 5 HOH A 48 348 39 HOH HOH . H 5 HOH A 49 349 10 HOH HOH . H 5 HOH A 50 350 35 HOH HOH . H 5 HOH A 51 351 33 HOH HOH . H 5 HOH A 52 352 77 HOH HOH . H 5 HOH A 53 353 80 HOH HOH . H 5 HOH A 54 354 29 HOH HOH . H 5 HOH A 55 355 44 HOH HOH . H 5 HOH A 56 356 48 HOH HOH . H 5 HOH A 57 357 11 HOH HOH . H 5 HOH A 58 358 30 HOH HOH . H 5 HOH A 59 359 8 HOH HOH . H 5 HOH A 60 360 106 HOH HOH . H 5 HOH A 61 361 61 HOH HOH . H 5 HOH A 62 362 17 HOH HOH . H 5 HOH A 63 363 71 HOH HOH . H 5 HOH A 64 364 45 HOH HOH . H 5 HOH A 65 365 17 HOH HOH . H 5 HOH A 66 366 46 HOH HOH . H 5 HOH A 67 367 57 HOH HOH . H 5 HOH A 68 368 20 HOH HOH . H 5 HOH A 69 369 64 HOH HOH . H 5 HOH A 70 370 5 HOH HOH . H 5 HOH A 71 371 4 HOH HOH . H 5 HOH A 72 372 13 HOH HOH . H 5 HOH A 73 373 91 HOH HOH . H 5 HOH A 74 374 2 HOH HOH . H 5 HOH A 75 375 38 HOH HOH . H 5 HOH A 76 376 36 HOH HOH . H 5 HOH A 77 377 51 HOH HOH . H 5 HOH A 78 378 15 HOH HOH . H 5 HOH A 79 379 60 HOH HOH . H 5 HOH A 80 380 8 HOH HOH . H 5 HOH A 81 381 34 HOH HOH . H 5 HOH A 82 382 101 HOH HOH . H 5 HOH A 83 383 12 HOH HOH . H 5 HOH A 84 384 82 HOH HOH . H 5 HOH A 85 385 75 HOH HOH . H 5 HOH A 86 386 103 HOH HOH . H 5 HOH A 87 387 78 HOH HOH . H 5 HOH A 88 388 40 HOH HOH . H 5 HOH A 89 389 7 HOH HOH . H 5 HOH A 90 390 95 HOH HOH . H 5 HOH A 91 391 32 HOH HOH . H 5 HOH A 92 392 100 HOH HOH . H 5 HOH A 93 393 56 HOH HOH . H 5 HOH A 94 394 63 HOH HOH . H 5 HOH A 95 395 21 HOH HOH . H 5 HOH A 96 396 67 HOH HOH . H 5 HOH A 97 397 54 HOH HOH . H 5 HOH A 98 398 87 HOH HOH . H 5 HOH A 99 399 104 HOH HOH . H 5 HOH A 100 400 36 HOH HOH . H 5 HOH A 101 401 59 HOH HOH . H 5 HOH A 102 402 35 HOH HOH . H 5 HOH A 103 403 96 HOH HOH . H 5 HOH A 104 404 79 HOH HOH . H 5 HOH A 105 405 89 HOH HOH . H 5 HOH A 106 406 26 HOH HOH . H 5 HOH A 107 407 84 HOH HOH . H 5 HOH A 108 408 31 HOH HOH . H 5 HOH A 109 409 22 HOH HOH . H 5 HOH A 110 410 66 HOH HOH . H 5 HOH A 111 411 72 HOH HOH . H 5 HOH A 112 412 9 HOH HOH . H 5 HOH A 113 413 55 HOH HOH . H 5 HOH A 114 414 27 HOH HOH . H 5 HOH A 115 415 53 HOH HOH . H 5 HOH A 116 416 34 HOH HOH . H 5 HOH A 117 417 37 HOH HOH . H 5 HOH A 118 418 83 HOH HOH . H 5 HOH A 119 419 18 HOH HOH . H 5 HOH A 120 420 52 HOH HOH . H 5 HOH A 121 421 81 HOH HOH . H 5 HOH A 122 422 47 HOH HOH . H 5 HOH A 123 423 19 HOH HOH . H 5 HOH A 124 424 90 HOH HOH . H 5 HOH A 125 425 13 HOH HOH . H 5 HOH A 126 426 65 HOH HOH . H 5 HOH A 127 427 85 HOH HOH . H 5 HOH A 128 428 23 HOH HOH . H 5 HOH A 129 429 74 HOH HOH . H 5 HOH A 130 430 76 HOH HOH . H 5 HOH A 131 431 73 HOH HOH . H 5 HOH A 132 432 88 HOH HOH . H 5 HOH A 133 433 86 HOH HOH . H 5 HOH A 134 434 99 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . B 2 -34.02 -2.169 2.442 1 46.65 ? FE HEC 201 A 1 HETATM 2 C CHA HEC . . . B 2 -35.448 -0.07 0.037 1 45.62 ? CHA HEC 201 A 1 HETATM 3 C CHB HEC . . . B 2 -32.512 -4.043 -0.039 1 44.93 ? CHB HEC 201 A 1 HETATM 4 C CHC HEC . . . B 2 -32.208 -3.888 4.796 1 44.82 ? CHC HEC 201 A 1 HETATM 5 C CHD HEC . . . B 2 -36.067 -0.849 4.94 1 45.62 ? CHD HEC 201 A 1 HETATM 6 N NA HEC . . . B 2 -33.983 -2.099 0.497 1 46.08 ? NA HEC 201 A 1 HETATM 7 C C1A HEC . . . B 2 -34.563 -1.118 -0.344 1 45.02 ? C1A HEC 201 A 1 HETATM 8 C C2A HEC . . . B 2 -34.135 -1.299 -1.699 1 45.34 ? C2A HEC 201 A 1 HETATM 9 C C3A HEC . . . B 2 -33.321 -2.408 -1.741 1 45.23 ? C3A HEC 201 A 1 HETATM 10 C C4A HEC . . . B 2 -33.224 -2.902 -0.377 1 44.82 ? C4A HEC 201 A 1 HETATM 11 C CMA HEC . . . B 2 -32.647 -2.934 -2.993 1 46.92 ? CMA HEC 201 A 1 HETATM 12 C CAA HEC . . . B 2 -34.498 -0.448 -2.886 1 46.8 ? CAA HEC 201 A 1 HETATM 13 C CBA HEC . . . B 2 -35.7 -1.099 -3.566 1 47.87 ? CBA HEC 201 A 1 HETATM 14 C CGA HEC . . . B 2 -36.141 -0.4 -4.85 1 49.08 ? CGA HEC 201 A 1 HETATM 15 O O1A HEC . . . B 2 -37.131 -0.768 -5.478 1 52.65 ? O1A HEC 201 A 1 HETATM 16 O O2A HEC . . . B 2 -35.427 0.622 -5.319 1 51.61 ? O2A HEC 201 A 1 HETATM 17 N NB HEC . . . B 2 -32.656 -3.583 2.399 1 45.63 ? NB HEC 201 A 1 HETATM 18 C C1B HEC . . . B 2 -32.228 -4.341 1.296 1 44.77 ? C1B HEC 201 A 1 HETATM 19 C C2B HEC . . . B 2 -31.443 -5.465 1.634 1 45.05 ? C2B HEC 201 A 1 HETATM 20 C C3B HEC . . . B 2 -31.301 -5.483 3.108 1 44.89 ? C3B HEC 201 A 1 HETATM 21 C C4B HEC . . . B 2 -32.096 -4.261 3.505 1 44.68 ? C4B HEC 201 A 1 HETATM 22 C CMB HEC . . . B 2 -30.834 -6.471 0.676 1 46.43 ? CMB HEC 201 A 1 HETATM 23 C CAB HEC . . . B 2 -30.51 -6.308 3.983 1 45.85 ? CAB HEC 201 A 1 HETATM 24 C CBB HEC . . . B 2 -29.039 -6.147 3.616 1 47.13 ? CBB HEC 201 A 1 HETATM 25 N NC HEC . . . B 2 -34.056 -2.257 4.39 1 46.26 ? NC HEC 201 A 1 HETATM 26 C C1C HEC . . . B 2 -33.323 -3.095 5.213 1 44.94 ? C1C HEC 201 A 1 HETATM 27 C C2C HEC . . . B 2 -33.748 -3.128 6.554 1 45.31 ? C2C HEC 201 A 1 HETATM 28 C C3C HEC . . . B 2 -34.912 -2.263 6.647 1 45.48 ? C3C HEC 201 A 1 HETATM 29 C C4C HEC . . . B 2 -35.052 -1.73 5.268 1 45.16 ? C4C HEC 201 A 1 HETATM 30 C CMC HEC . . . B 2 -33.167 -3.96 7.71 1 46.85 ? CMC HEC 201 A 1 HETATM 31 C CAC HEC . . . B 2 -35.742 -2.029 7.767 1 46.39 ? CAC HEC 201 A 1 HETATM 32 C CBC HEC . . . B 2 -35.08 -1.53 9.054 1 47.72 ? CBC HEC 201 A 1 HETATM 33 N ND HEC . . . B 2 -35.388 -0.801 2.502 1 45.27 ? ND HEC 201 A 1 HETATM 34 C C1D HEC . . . B 2 -36.158 -0.383 3.598 1 45.38 ? C1D HEC 201 A 1 HETATM 35 C C2D HEC . . . B 2 -37.061 0.656 3.228 1 46.02 ? C2D HEC 201 A 1 HETATM 36 C C3D HEC . . . B 2 -36.878 0.852 1.84 1 46.22 ? C3D HEC 201 A 1 HETATM 37 C C4D HEC . . . B 2 -35.877 -0.021 1.406 1 45.37 ? C4D HEC 201 A 1 HETATM 38 C CMD HEC . . . B 2 -38.048 1.39 4.121 1 48.09 ? CMD HEC 201 A 1 HETATM 39 C CAD HEC . . . B 2 -37.596 1.848 1 1 48.46 ? CAD HEC 201 A 1 HETATM 40 C CBD HEC . . . B 2 -36.987 3.199 1.363 1 50.69 ? CBD HEC 201 A 1 HETATM 41 C CGD HEC . . . B 2 -37.559 4.331 0.551 1 52.18 ? CGD HEC 201 A 1 HETATM 42 O O1D HEC . . . B 2 -38.689 4.382 0.103 1 55.5 ? O1D HEC 201 A 1 HETATM 43 O O2D HEC . . . B 2 -36.732 5.358 0.356 1 53.42 ? O2D HEC 201 A 1 # _model_server_stats.io_time_ms 120 _model_server_stats.parse_time_ms 141 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 497 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 43 #