data_6RUP # _model_server_result.job_id li0gxvMNNKQup74DPIuXwQ _model_server_result.datetime_utc '2025-07-12 23:13:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rup # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":202}' # _entry.id 6RUP # _exptl.entry_id 6RUP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6RUP _cell.length_a 51.04 _cell.length_b 51.04 _cell.length_c 182.34 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RUP _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,B,C,D,E,F,G,H 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 51.04 51.04 91.17 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id OD2 _struct_conn.ptnr1_label_comp_id ASP _struct_conn.ptnr1_label_seq_id 88 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id ASP _struct_conn.ptnr1_auth_seq_id 96 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_atom_id MG _struct_conn.ptnr2_label_comp_id MG _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id MG _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.25 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6RUP _atom_sites.fract_transf_matrix[1][1] 0.019592 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019592 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005484 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 MG B 1 201 1 MG MG . E 3 MG B 1 202 2 MG MG . F 4 HOH A 1 201 20 HOH HOH . F 4 HOH A 2 202 96 HOH HOH . F 4 HOH A 3 203 52 HOH HOH . F 4 HOH A 4 204 49 HOH HOH . F 4 HOH A 5 205 53 HOH HOH . F 4 HOH A 6 206 5 HOH HOH . F 4 HOH A 7 207 28 HOH HOH . F 4 HOH A 8 208 54 HOH HOH . F 4 HOH A 9 209 34 HOH HOH . F 4 HOH A 10 210 1 HOH HOH . F 4 HOH A 11 211 2 HOH HOH . F 4 HOH A 12 212 66 HOH HOH . F 4 HOH A 13 213 30 HOH HOH . F 4 HOH A 14 214 79 HOH HOH . F 4 HOH A 15 215 77 HOH HOH . F 4 HOH A 16 216 35 HOH HOH . F 4 HOH A 17 217 97 HOH HOH . F 4 HOH A 18 218 95 HOH HOH . F 4 HOH A 19 219 45 HOH HOH . F 4 HOH A 20 220 75 HOH HOH . F 4 HOH A 21 221 55 HOH HOH . F 4 HOH A 22 222 24 HOH HOH . F 4 HOH A 23 223 94 HOH HOH . F 4 HOH A 24 224 80 HOH HOH . F 4 HOH A 25 225 3 HOH HOH . F 4 HOH A 26 226 27 HOH HOH . F 4 HOH A 27 227 67 HOH HOH . F 4 HOH A 28 228 39 HOH HOH . F 4 HOH A 29 229 47 HOH HOH . F 4 HOH A 30 230 11 HOH HOH . F 4 HOH A 31 231 44 HOH HOH . F 4 HOH A 32 232 23 HOH HOH . F 4 HOH A 33 233 78 HOH HOH . F 4 HOH A 34 234 12 HOH HOH . F 4 HOH A 35 235 43 HOH HOH . F 4 HOH A 36 236 14 HOH HOH . F 4 HOH A 37 237 48 HOH HOH . F 4 HOH A 38 238 51 HOH HOH . F 4 HOH A 39 239 9 HOH HOH . F 4 HOH A 40 240 4 HOH HOH . F 4 HOH A 41 241 73 HOH HOH . F 4 HOH A 42 242 103 HOH HOH . F 4 HOH A 43 243 13 HOH HOH . F 4 HOH A 44 244 71 HOH HOH . F 4 HOH A 45 245 33 HOH HOH . F 4 HOH A 46 246 15 HOH HOH . G 4 HOH B 1 301 7 HOH HOH . G 4 HOH B 2 302 99 HOH HOH . G 4 HOH B 3 303 21 HOH HOH . G 4 HOH B 4 304 98 HOH HOH . G 4 HOH B 5 305 60 HOH HOH . G 4 HOH B 6 306 41 HOH HOH . G 4 HOH B 7 307 84 HOH HOH . G 4 HOH B 8 308 37 HOH HOH . G 4 HOH B 9 309 70 HOH HOH . G 4 HOH B 10 310 69 HOH HOH . G 4 HOH B 11 311 26 HOH HOH . G 4 HOH B 12 312 81 HOH HOH . G 4 HOH B 13 313 17 HOH HOH . G 4 HOH B 14 314 92 HOH HOH . G 4 HOH B 15 315 25 HOH HOH . G 4 HOH B 16 316 61 HOH HOH . G 4 HOH B 17 317 32 HOH HOH . G 4 HOH B 18 318 36 HOH HOH . G 4 HOH B 19 319 91 HOH HOH . G 4 HOH B 20 320 22 HOH HOH . G 4 HOH B 21 321 16 HOH HOH . G 4 HOH B 22 322 6 HOH HOH . G 4 HOH B 23 323 18 HOH HOH . G 4 HOH B 24 324 76 HOH HOH . G 4 HOH B 25 325 19 HOH HOH . G 4 HOH B 26 326 74 HOH HOH . G 4 HOH B 27 327 83 HOH HOH . G 4 HOH B 28 328 42 HOH HOH . G 4 HOH B 29 329 89 HOH HOH . G 4 HOH B 30 330 85 HOH HOH . G 4 HOH B 31 331 90 HOH HOH . G 4 HOH B 32 332 68 HOH HOH . G 4 HOH B 33 333 29 HOH HOH . G 4 HOH B 34 334 56 HOH HOH . G 4 HOH B 35 335 82 HOH HOH . G 4 HOH B 36 336 46 HOH HOH . G 4 HOH B 37 337 10 HOH HOH . G 4 HOH B 38 338 88 HOH HOH . G 4 HOH B 39 339 100 HOH HOH . G 4 HOH B 40 340 38 HOH HOH . G 4 HOH B 41 341 62 HOH HOH . G 4 HOH B 42 342 87 HOH HOH . G 4 HOH B 43 343 86 HOH HOH . G 4 HOH B 44 344 8 HOH HOH . G 4 HOH B 45 345 31 HOH HOH . G 4 HOH B 46 346 101 HOH HOH . G 4 HOH B 47 347 57 HOH HOH . G 4 HOH B 48 348 58 HOH HOH . H 4 HOH C 1 101 102 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 20.846 _atom_site.Cartn_y 30.194 _atom_site.Cartn_z 45.585 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 92.2 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 202 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #