data_6RUQ
#
_model_server_result.job_id            Jnc7zi-yf0UJIYspbESVHA 
_model_server_result.datetime_utc      '2024-11-25 04:55:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ruq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":902}' 
#
_entry.id    6RUQ 
#
_exptl.entry_id    6RUQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              409.254 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '{[7-morpholin-4-yl-2,3-dioxo-6-(trifluoromethyl)-3,4-dihydroquinoxalin-1(2H)-yl]methyl}phosphonic acid' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.264 
_cell.angle_gamma         90 
_cell.entry_id            6RUQ 
_cell.length_a            91.773 
_cell.length_b            306.596 
_cell.length_c            107.728 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6RUQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 I N N 
? 5 K N N 
? 5 M N N 
? 5 O N N 
#
loop_
_pdbx_entity_branch.entity_id
_pdbx_entity_branch.type
2 oligosaccharide 
3 oligosaccharide 
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.details
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.atom_stereo_config_1
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.atom_stereo_config_2
_pdbx_entity_branch_link.value_order
1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 
2 ? 2 3 2 BMA NAG C1 O1 . O4 HO4 . sing 
3 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 
4 ? 3 3 2 BMA NAG C1 O1 . O4 HO4 . sing 
5 ? 3 4 3 BMA BMA C1 O1 . O3 HO3 . sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n E NAG 1 E 1 NAG H 834 NAG 
2 n E NAG 2 E 2 NAG H 835 NAG 
2 n E BMA 3 E 3 BMA H 836 BMA 
3 n F NAG 1 F 1 NAG G 834 NAG 
3 n F NAG 2 F 2 NAG G 835 NAG 
3 n F BMA 3 F 3 BMA G 836 BMA 
3 n F BMA 4 F 4 BMA G 837 BMA 
2 n G NAG 1 G 1 NAG I 834 NAG 
2 n G NAG 2 G 2 NAG I 835 NAG 
2 n G BMA 3 G 3 BMA I 836 BMA 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 54 A CYS 63 1_555 A SG CYS 306 A CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf2 A SG CYS 709 A CYS 718 1_555 A SG CYS 764 A CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 B SG CYS 54 B CYS 63 1_555 B SG CYS 306 B CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf4 B SG CYS 709 B CYS 718 1_555 B SG CYS 764 B CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf5 C SG CYS 54 C CYS 63 1_555 C SG CYS 306 C CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf6 C SG CYS 709 C CYS 718 1_555 C SG CYS 764 C CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf7 D SG CYS 54 D CYS 63 1_555 D SG CYS 306 D CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf8 D SG CYS 709 D CYS 718 1_555 D SG CYS 764 D CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
covale ? covale1 A ND2 ASN 346 A ASN 355 1_555 E C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? 
covale ? covale2 B ND2 ASN 346 B ASN 355 1_555 F C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? 
covale ? covale3 C ND2 ASN 346 C ASN 355 1_555 G C1 NAG . G NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
covale ? covale4 E O4 NAG . E NAG 1 1_555 E C1 NAG . E NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
covale ? covale5 E O4 NAG . E NAG 2 1_555 E C1 BMA . E BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale6 F O4 NAG . F NAG 1 1_555 F C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? 
covale ? covale7 F O4 NAG . F NAG 2 1_555 F C1 BMA . F BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale8 F O3 BMA . F BMA 3 1_555 F C1 BMA . F BMA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? 
covale ? covale9 G O4 NAG . G NAG 1 1_555 G C1 NAG . G NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale10 G O4 NAG . G NAG 2 1_555 G C1 BMA . G BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? 
#
_chem_comp.formula           'C14 H15 F3 N3 O6 P' 
_chem_comp.formula_weight    409.254 
_chem_comp.id                ZK1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '{[7-morpholin-4-yl-2,3-dioxo-6-(trifluoromethyl)-3,4-dihydroquinoxalin-1(2H)-yl]methyl}phosphonic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '[[3,4-Dihydro-7-(4-morpholinyl)-2,3-dioxo-6-(trifluorom ethyl)-1(2H)-quinoxalinyl]methyl]phosphonic acid' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAT OAA ZK1 doub 477 n n 
CAU OAB ZK1 doub 478 n n 
OAC PBA ZK1 doub 479 n n 
OAD PBA ZK1 sing 480 n n 
OAD HOAD ZK1 sing 481 n n 
PBA OAE ZK1 sing 482 n n 
OAE HOAE ZK1 sing 483 n n 
FAF CAZ ZK1 sing 484 n n 
CAZ FAG ZK1 sing 485 n n 
CAZ FAH ZK1 sing 486 n n 
CAR CAI ZK1 doub 487 n y 
CAI CAW ZK1 sing 488 n y 
CAI HAI ZK1 sing 489 n n 
CAS CAJ ZK1 doub 490 n y 
CAJ CAV ZK1 sing 491 n y 
CAJ HAJ ZK1 sing 492 n n 
CAK CAM ZK1 sing 493 n n 
CAK OAQ ZK1 sing 494 n n 
CAK HAK ZK1 sing 495 n n 
CAK HAKA ZK1 sing 496 n n 
OAQ CAL ZK1 sing 497 n n 
CAL CAN ZK1 sing 498 n n 
CAL HAL ZK1 sing 499 n n 
CAL HALA ZK1 sing 500 n n 
CAM NAX ZK1 sing 501 n n 
CAM HAM ZK1 sing 502 n n 
CAM HAMA ZK1 sing 503 n n 
NAX CAN ZK1 sing 504 n n 
CAN HAN ZK1 sing 505 n n 
CAN HANA ZK1 sing 506 n n 
PBA CAO ZK1 sing 507 n n 
NAY CAO ZK1 sing 508 n n 
CAO HAO ZK1 sing 509 n n 
CAO HAOA ZK1 sing 510 n n 
CAV NAP ZK1 sing 511 n n 
NAP CAT ZK1 sing 512 n n 
NAP HNAP ZK1 sing 513 n n 
NAX CAR ZK1 sing 514 n n 
CAS CAR ZK1 sing 515 n y 
CAZ CAS ZK1 sing 516 n n 
CAT CAU ZK1 sing 517 n n 
NAY CAU ZK1 sing 518 n n 
CAV CAW ZK1 doub 519 n y 
CAW NAY ZK1 sing 520 n n 
#
_atom_sites.entry_id                     6RUQ 
_atom_sites.fract_transf_matrix[1][1]    0.010896 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000812 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.003262 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009308 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
H 4 GYK A 1 901 1 GYK GYK . 
I 5 ZK1 A 1 902 2 ZK1 ZK1 . 
J 4 GYK B 1 901 3 GYK GYK . 
K 5 ZK1 B 1 902 3 ZK1 ZK1 . 
L 4 GYK C 1 901 2 GYK GYK . 
M 5 ZK1 C 1 902 1 ZK1 ZK1 . 
N 4 GYK D 1 901 4 GYK GYK . 
O 5 ZK1 D 1 902 4 ZK1 ZK1 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OAA ZK1 . . . K 5 -67.03 -83.786 -29.6 1 178.25 ? OAA ZK1 902 B 1 
HETATM 2 O OAB ZK1 . . . K 5 -64.684 -83.709 -31.222 1 198.38 ? OAB ZK1 902 B 1 
HETATM 3 O OAC ZK1 . . . K 5 -62.697 -82.373 -33.16 1 196.07 ? OAC ZK1 902 B 1 
HETATM 4 O OAD ZK1 . . . K 5 -61.025 -80.594 -32.011 1 204.31 -1 OAD ZK1 902 B 1 
HETATM 5 O OAE ZK1 . . . K 5 -63.541 -80.48 -31.684 1 189.92 -1 OAE ZK1 902 B 1 
HETATM 6 F FAF ZK1 . . . K 5 -63.715 -78.784 -24.265 1 172.97 ? FAF ZK1 902 B 1 
HETATM 7 F FAG ZK1 . . . K 5 -64.542 -80.683 -23.455 1 186.77 ? FAG ZK1 902 B 1 
HETATM 8 F FAH ZK1 . . . K 5 -62.347 -80.381 -23.507 1 201 ? FAH ZK1 902 B 1 
HETATM 9 C CAI ZK1 . . . K 5 -62.348 -81.303 -27.659 1 184.39 ? CAI ZK1 902 B 1 
HETATM 10 C CAJ ZK1 . . . K 5 -64.677 -81.385 -26.056 1 184.45 ? CAJ ZK1 902 B 1 
HETATM 11 C CAK ZK1 . . . K 5 -59.51 -78.152 -25.777 1 184.34 ? CAK ZK1 902 B 1 
HETATM 12 C CAL ZK1 . . . K 5 -58.575 -80.247 -25.606 1 199.76 ? CAL ZK1 902 B 1 
HETATM 13 C CAM ZK1 . . . K 5 -60.937 -78.602 -25.883 1 184.98 ? CAM ZK1 902 B 1 
HETATM 14 C CAN ZK1 . . . K 5 -59.939 -80.97 -25.524 1 201.09 ? CAN ZK1 902 B 1 
HETATM 15 C CAO ZK1 . . . K 5 -62.347 -82.496 -30.31 1 185.34 ? CAO ZK1 902 B 1 
HETATM 16 N NAP ZK1 . . . K 5 -65.848 -82.574 -27.808 1 181.74 ? NAP ZK1 902 B 1 
HETATM 17 O OAQ ZK1 . . . K 5 -58.665 -79.073 -26.371 1 182.27 ? OAQ ZK1 902 B 1 
HETATM 18 C CAR ZK1 . . . K 5 -62.322 -80.714 -26.365 1 185.81 ? CAR ZK1 902 B 1 
HETATM 19 C CAS ZK1 . . . K 5 -63.483 -80.75 -25.558 1 184.44 ? CAS ZK1 902 B 1 
HETATM 20 C CAT ZK1 . . . K 5 -65.862 -83.167 -29.116 1 183.02 ? CAT ZK1 902 B 1 
HETATM 21 C CAU ZK1 . . . K 5 -64.67 -83.13 -29.943 1 189.02 ? CAU ZK1 902 B 1 
HETATM 22 C CAV ZK1 . . . K 5 -64.698 -81.967 -27.335 1 182.51 ? CAV ZK1 902 B 1 
HETATM 23 C CAW ZK1 . . . K 5 -63.531 -81.93 -28.146 1 180.62 ? CAW ZK1 902 B 1 
HETATM 24 N NAX ZK1 . . . K 5 -61.081 -80.091 -25.919 1 190.06 ? NAX ZK1 902 B 1 
HETATM 25 N NAY ZK1 . . . K 5 -63.545 -82.535 -29.481 1 183.34 ? NAY ZK1 902 B 1 
HETATM 26 C CAZ ZK1 . . . K 5 -63.518 -80.133 -24.162 1 186.71 ? CAZ ZK1 902 B 1 
HETATM 27 P PBA ZK1 . . . K 5 -62.438 -81.426 -31.832 1 186.2 ? PBA ZK1 902 B 1 
#
_model_server_stats.io_time_ms              38 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    40 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           27 
#