data_6RUU # _model_server_result.job_id 4cYJzJ86SdRaD61cSUEamg _model_server_result.datetime_utc '2025-04-09 14:26:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ruu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":508}' # _entry.id 6RUU # _exptl.entry_id 6RUU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6RUU _cell.length_a 53.55 _cell.length_b 167.16 _cell.length_c 179.51 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RUU _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,F,G,H,I,J,K,L,M,N 1 1 C,O,P,Q,R,S,T,U,V 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_465 -x-1,-y+1,z -1 0 0 0 -1 0 0 0 1 -53.55 167.16 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 M N N ? 4 N N N ? 4 U N N ? 4 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 63 A CYS 202 1_555 B SG CYS 148 B CYS 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 A SG CYS 148 A CYS 287 1_555 B SG CYS 63 B CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 C SG CYS 63 C CYS 202 1_555 C SG CYS 148 C CYS 287 2_465 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc1 A SG CYS 260 A CYS 399 1_555 E HG HG . A HG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? metalc ? metalc2 A SG CYS 281 A CYS 420 1_555 D HG HG . A HG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? metalc ? metalc3 B SD MET 252 B MET 391 1_555 L HG HG . B HG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.161 ? metalc ? metalc4 B SG CYS 260 B CYS 399 1_555 L HG HG . B HG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? metalc ? metalc5 C SG CYS 152 C CYS 291 1_555 Q HG HG . C HG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.646 ? metalc ? metalc6 C SD MET 252 C MET 391 1_555 P HG HG . C HG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.077 ? metalc ? metalc7 C SG CYS 260 C CYS 399 1_555 P HG HG . C HG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 301 n n S O2 SO4 doub 302 n n S O3 SO4 sing 303 n n S O4 SO4 sing 304 n n # _atom_sites.entry_id 6RUU _atom_sites.fract_transf_matrix[1][1] 0.018674 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005982 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005571 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HG A 1 501 1 HG HG . E 2 HG A 1 502 2 HG HG . F 3 GOL A 1 503 1 GOL GOL . G 3 GOL A 1 504 4 GOL GOL . H 4 SO4 A 1 505 1 SO4 SO4 . I 4 SO4 A 1 506 2 SO4 SO4 . J 4 SO4 A 1 507 5 SO4 SO4 . K 4 SO4 A 1 508 8 SO4 SO4 . L 2 HG B 1 501 3 HG HG . M 4 SO4 B 1 502 3 SO4 SO4 . N 4 SO4 B 1 503 7 SO4 SO4 . O 2 HG C 1 501 4 HG HG . P 2 HG C 1 502 5 HG HG . Q 2 HG C 1 503 6 HG HG . R 2 HG C 1 504 7 HG HG . S 2 HG C 1 505 8 HG HG . T 3 GOL C 1 506 3 GOL GOL . U 4 SO4 C 1 507 4 SO4 SO4 . V 4 SO4 C 1 508 6 SO4 SO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . V 4 -40.662 56.756 -13.935 1 67.74 ? S SO4 508 C 1 HETATM 2 O O1 SO4 . . . V 4 -39.682 56.003 -14.711 1 64.67 ? O1 SO4 508 C 1 HETATM 3 O O2 SO4 . . . V 4 -41.901 56.849 -14.703 1 54.14 ? O2 SO4 508 C 1 HETATM 4 O O3 SO4 . . . V 4 -40.922 56.087 -12.661 1 62.85 ? O3 SO4 508 C 1 HETATM 5 O O4 SO4 . . . V 4 -40.136 58.093 -13.678 1 75.05 ? O4 SO4 508 C 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #