data_6RVQ # _model_server_result.job_id TbsbzMVxlKvNkTT3svShpQ _model_server_result.datetime_utc '2025-07-14 23:07:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rvq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6RVQ # _exptl.entry_id 6RVQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.52 _cell.angle_gamma 90 _cell.entry_id 6RVQ _cell.length_a 72.373 _cell.length_b 50.5 _cell.length_c 88.431 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RVQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LEU 193 A LEU 200 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc2 A O VAL 196 A VAL 203 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc3 A OD1 ASN 201 A ASN 208 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.708 ? metalc ? metalc4 A O LEU 202 A LEU 209 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc5 C CA CA . A CA 402 1_555 E O HOH . A HOH 725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 79 n n PB O2B GDP sing 80 n n PB O3B GDP sing 81 n n PB O3A GDP sing 82 n n O2B HOB2 GDP sing 83 n n O3B HOB3 GDP sing 84 n n O3A PA GDP sing 85 n n PA O1A GDP doub 86 n n PA O2A GDP sing 87 n n PA O5' GDP sing 88 n n O2A HOA2 GDP sing 89 n n O5' C5' GDP sing 90 n n C5' C4' GDP sing 91 n n C5' H5' GDP sing 92 n n C5' "H5''" GDP sing 93 n n C4' O4' GDP sing 94 n n C4' C3' GDP sing 95 n n C4' H4' GDP sing 96 n n O4' C1' GDP sing 97 n n C3' O3' GDP sing 98 n n C3' C2' GDP sing 99 n n C3' H3' GDP sing 100 n n O3' HO3' GDP sing 101 n n C2' O2' GDP sing 102 n n C2' C1' GDP sing 103 n n C2' H2' GDP sing 104 n n O2' HO2' GDP sing 105 n n C1' N9 GDP sing 106 n n C1' H1' GDP sing 107 n n N9 C8 GDP sing 108 n y N9 C4 GDP sing 109 n y C8 N7 GDP doub 110 n y C8 H8 GDP sing 111 n n N7 C5 GDP sing 112 n y C5 C6 GDP sing 113 n n C5 C4 GDP doub 114 n y C6 O6 GDP doub 115 n n C6 N1 GDP sing 116 n n N1 C2 GDP sing 117 n n N1 HN1 GDP sing 118 n n C2 N2 GDP sing 119 n n C2 N3 GDP doub 120 n n N2 HN21 GDP sing 121 n n N2 HN22 GDP sing 122 n n N3 C4 GDP sing 123 n n # _atom_sites.entry_id 6RVQ _atom_sites.fract_transf_matrix[1][1] 0.013817 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005449 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019802 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012156 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP A 1 401 401 GDP GDP . C 3 CA A 1 402 402 CA CA . D 4 EDO A 1 403 1 EDO EDO . E 5 HOH A 1 501 325 HOH HOH . E 5 HOH A 2 502 320 HOH HOH . E 5 HOH A 3 503 229 HOH HOH . E 5 HOH A 4 504 82 HOH HOH . E 5 HOH A 5 505 329 HOH HOH . E 5 HOH A 6 506 74 HOH HOH . E 5 HOH A 7 507 199 HOH HOH . E 5 HOH A 8 508 36 HOH HOH . E 5 HOH A 9 509 286 HOH HOH . E 5 HOH A 10 510 185 HOH HOH . E 5 HOH A 11 511 96 HOH HOH . E 5 HOH A 12 512 267 HOH HOH . E 5 HOH A 13 513 212 HOH HOH . E 5 HOH A 14 514 224 HOH HOH . E 5 HOH A 15 515 200 HOH HOH . E 5 HOH A 16 516 237 HOH HOH . E 5 HOH A 17 517 144 HOH HOH . E 5 HOH A 18 518 178 HOH HOH . E 5 HOH A 19 519 136 HOH HOH . E 5 HOH A 20 520 315 HOH HOH . E 5 HOH A 21 521 331 HOH HOH . E 5 HOH A 22 522 142 HOH HOH . E 5 HOH A 23 523 217 HOH HOH . E 5 HOH A 24 524 23 HOH HOH . E 5 HOH A 25 525 333 HOH HOH . E 5 HOH A 26 526 173 HOH HOH . E 5 HOH A 27 527 91 HOH HOH . E 5 HOH A 28 528 120 HOH HOH . E 5 HOH A 29 529 118 HOH HOH . E 5 HOH A 30 530 157 HOH HOH . E 5 HOH A 31 531 130 HOH HOH . E 5 HOH A 32 532 328 HOH HOH . E 5 HOH A 33 533 174 HOH HOH . E 5 HOH A 34 534 194 HOH HOH . E 5 HOH A 35 535 223 HOH HOH . E 5 HOH A 36 536 108 HOH HOH . E 5 HOH A 37 537 64 HOH HOH . E 5 HOH A 38 538 161 HOH HOH . E 5 HOH A 39 539 17 HOH HOH . E 5 HOH A 40 540 52 HOH HOH . E 5 HOH A 41 541 302 HOH HOH . E 5 HOH A 42 542 152 HOH HOH . E 5 HOH A 43 543 103 HOH HOH . E 5 HOH A 44 544 18 HOH HOH . E 5 HOH A 45 545 319 HOH HOH . E 5 HOH A 46 546 271 HOH HOH . E 5 HOH A 47 547 226 HOH HOH . E 5 HOH A 48 548 206 HOH HOH . E 5 HOH A 49 549 253 HOH HOH . E 5 HOH A 50 550 334 HOH HOH . E 5 HOH A 51 551 278 HOH HOH . E 5 HOH A 52 552 31 HOH HOH . E 5 HOH A 53 553 67 HOH HOH . E 5 HOH A 54 554 14 HOH HOH . E 5 HOH A 55 555 7 HOH HOH . E 5 HOH A 56 556 280 HOH HOH . E 5 HOH A 57 557 145 HOH HOH . E 5 HOH A 58 558 166 HOH HOH . E 5 HOH A 59 559 236 HOH HOH . E 5 HOH A 60 560 140 HOH HOH . E 5 HOH A 61 561 32 HOH HOH . E 5 HOH A 62 562 68 HOH HOH . E 5 HOH A 63 563 94 HOH HOH . E 5 HOH A 64 564 9 HOH HOH . E 5 HOH A 65 565 25 HOH HOH . E 5 HOH A 66 566 95 HOH HOH . E 5 HOH A 67 567 149 HOH HOH . E 5 HOH A 68 568 80 HOH HOH . E 5 HOH A 69 569 22 HOH HOH . E 5 HOH A 70 570 38 HOH HOH . E 5 HOH A 71 571 165 HOH HOH . E 5 HOH A 72 572 79 HOH HOH . E 5 HOH A 73 573 204 HOH HOH . E 5 HOH A 74 574 21 HOH HOH . E 5 HOH A 75 575 1 HOH HOH . E 5 HOH A 76 576 121 HOH HOH . E 5 HOH A 77 577 44 HOH HOH . E 5 HOH A 78 578 30 HOH HOH . E 5 HOH A 79 579 208 HOH HOH . E 5 HOH A 80 580 318 HOH HOH . E 5 HOH A 81 581 42 HOH HOH . E 5 HOH A 82 582 113 HOH HOH . E 5 HOH A 83 583 164 HOH HOH . E 5 HOH A 84 584 213 HOH HOH . E 5 HOH A 85 585 19 HOH HOH . E 5 HOH A 86 586 6 HOH HOH . E 5 HOH A 87 587 29 HOH HOH . E 5 HOH A 88 588 47 HOH HOH . E 5 HOH A 89 589 63 HOH HOH . E 5 HOH A 90 590 128 HOH HOH . E 5 HOH A 91 591 146 HOH HOH . E 5 HOH A 92 592 16 HOH HOH . E 5 HOH A 93 593 211 HOH HOH . E 5 HOH A 94 594 137 HOH HOH . E 5 HOH A 95 595 160 HOH HOH . E 5 HOH A 96 596 99 HOH HOH . E 5 HOH A 97 597 28 HOH HOH . E 5 HOH A 98 598 105 HOH HOH . E 5 HOH A 99 599 57 HOH HOH . E 5 HOH A 100 600 177 HOH HOH . E 5 HOH A 101 601 143 HOH HOH . E 5 HOH A 102 602 234 HOH HOH . E 5 HOH A 103 603 60 HOH HOH . E 5 HOH A 104 604 2 HOH HOH . E 5 HOH A 105 605 59 HOH HOH . E 5 HOH A 106 606 33 HOH HOH . E 5 HOH A 107 607 12 HOH HOH . E 5 HOH A 108 608 290 HOH HOH . E 5 HOH A 109 609 11 HOH HOH . E 5 HOH A 110 610 154 HOH HOH . E 5 HOH A 111 611 135 HOH HOH . E 5 HOH A 112 612 90 HOH HOH . E 5 HOH A 113 613 83 HOH HOH . E 5 HOH A 114 614 39 HOH HOH . E 5 HOH A 115 615 56 HOH HOH . E 5 HOH A 116 616 97 HOH HOH . E 5 HOH A 117 617 279 HOH HOH . E 5 HOH A 118 618 274 HOH HOH . E 5 HOH A 119 619 123 HOH HOH . E 5 HOH A 120 620 321 HOH HOH . E 5 HOH A 121 621 88 HOH HOH . E 5 HOH A 122 622 65 HOH HOH . E 5 HOH A 123 623 264 HOH HOH . E 5 HOH A 124 624 62 HOH HOH . E 5 HOH A 125 625 8 HOH HOH . E 5 HOH A 126 626 172 HOH HOH . E 5 HOH A 127 627 207 HOH HOH . E 5 HOH A 128 628 92 HOH HOH . E 5 HOH A 129 629 41 HOH HOH . E 5 HOH A 130 630 106 HOH HOH . E 5 HOH A 131 631 107 HOH HOH . E 5 HOH A 132 632 3 HOH HOH . E 5 HOH A 133 633 13 HOH HOH . E 5 HOH A 134 634 43 HOH HOH . E 5 HOH A 135 635 20 HOH HOH . E 5 HOH A 136 636 261 HOH HOH . E 5 HOH A 137 637 129 HOH HOH . E 5 HOH A 138 638 115 HOH HOH . E 5 HOH A 139 639 245 HOH HOH . E 5 HOH A 140 640 153 HOH HOH . E 5 HOH A 141 641 5 HOH HOH . E 5 HOH A 142 642 203 HOH HOH . E 5 HOH A 143 643 195 HOH HOH . E 5 HOH A 144 644 134 HOH HOH . E 5 HOH A 145 645 116 HOH HOH . E 5 HOH A 146 646 216 HOH HOH . E 5 HOH A 147 647 78 HOH HOH . E 5 HOH A 148 648 214 HOH HOH . E 5 HOH A 149 649 277 HOH HOH . E 5 HOH A 150 650 222 HOH HOH . E 5 HOH A 151 651 26 HOH HOH . E 5 HOH A 152 652 323 HOH HOH . E 5 HOH A 153 653 187 HOH HOH . E 5 HOH A 154 654 183 HOH HOH . E 5 HOH A 155 655 215 HOH HOH . E 5 HOH A 156 656 192 HOH HOH . E 5 HOH A 157 657 218 HOH HOH . E 5 HOH A 158 658 46 HOH HOH . E 5 HOH A 159 659 24 HOH HOH . E 5 HOH A 160 660 15 HOH HOH . E 5 HOH A 161 661 77 HOH HOH . E 5 HOH A 162 662 332 HOH HOH . E 5 HOH A 163 663 168 HOH HOH . E 5 HOH A 164 664 69 HOH HOH . E 5 HOH A 165 665 37 HOH HOH . E 5 HOH A 166 666 89 HOH HOH . E 5 HOH A 167 667 75 HOH HOH . E 5 HOH A 168 668 230 HOH HOH . E 5 HOH A 169 669 40 HOH HOH . E 5 HOH A 170 670 313 HOH HOH . E 5 HOH A 171 671 45 HOH HOH . E 5 HOH A 172 672 34 HOH HOH . E 5 HOH A 173 673 51 HOH HOH . E 5 HOH A 174 674 292 HOH HOH . E 5 HOH A 175 675 326 HOH HOH . E 5 HOH A 176 676 284 HOH HOH . E 5 HOH A 177 677 4 HOH HOH . E 5 HOH A 178 678 58 HOH HOH . E 5 HOH A 179 679 275 HOH HOH . E 5 HOH A 180 680 131 HOH HOH . E 5 HOH A 181 681 138 HOH HOH . E 5 HOH A 182 682 306 HOH HOH . E 5 HOH A 183 683 132 HOH HOH . E 5 HOH A 184 684 87 HOH HOH . E 5 HOH A 185 685 48 HOH HOH . E 5 HOH A 186 686 93 HOH HOH . E 5 HOH A 187 687 124 HOH HOH . E 5 HOH A 188 688 186 HOH HOH . E 5 HOH A 189 689 101 HOH HOH . E 5 HOH A 190 690 309 HOH HOH . E 5 HOH A 191 691 72 HOH HOH . E 5 HOH A 192 692 86 HOH HOH . E 5 HOH A 193 693 35 HOH HOH . E 5 HOH A 194 694 182 HOH HOH . E 5 HOH A 195 695 27 HOH HOH . E 5 HOH A 196 696 141 HOH HOH . E 5 HOH A 197 697 176 HOH HOH . E 5 HOH A 198 698 266 HOH HOH . E 5 HOH A 199 699 49 HOH HOH . E 5 HOH A 200 700 163 HOH HOH . E 5 HOH A 201 701 180 HOH HOH . E 5 HOH A 202 702 228 HOH HOH . E 5 HOH A 203 703 155 HOH HOH . E 5 HOH A 204 704 285 HOH HOH . E 5 HOH A 205 705 148 HOH HOH . E 5 HOH A 206 706 133 HOH HOH . E 5 HOH A 207 707 322 HOH HOH . E 5 HOH A 208 708 84 HOH HOH . E 5 HOH A 209 709 147 HOH HOH . E 5 HOH A 210 710 335 HOH HOH . E 5 HOH A 211 711 104 HOH HOH . E 5 HOH A 212 712 276 HOH HOH . E 5 HOH A 213 713 175 HOH HOH . E 5 HOH A 214 714 327 HOH HOH . E 5 HOH A 215 715 247 HOH HOH . E 5 HOH A 216 716 190 HOH HOH . E 5 HOH A 217 717 189 HOH HOH . E 5 HOH A 218 718 151 HOH HOH . E 5 HOH A 219 719 126 HOH HOH . E 5 HOH A 220 720 50 HOH HOH . E 5 HOH A 221 721 169 HOH HOH . E 5 HOH A 222 722 259 HOH HOH . E 5 HOH A 223 723 158 HOH HOH . E 5 HOH A 224 724 55 HOH HOH . E 5 HOH A 225 725 139 HOH HOH . E 5 HOH A 226 726 196 HOH HOH . E 5 HOH A 227 727 156 HOH HOH . E 5 HOH A 228 728 242 HOH HOH . E 5 HOH A 229 729 114 HOH HOH . E 5 HOH A 230 730 191 HOH HOH . E 5 HOH A 231 731 184 HOH HOH . E 5 HOH A 232 732 85 HOH HOH . E 5 HOH A 233 733 257 HOH HOH . E 5 HOH A 234 734 283 HOH HOH . E 5 HOH A 235 735 109 HOH HOH . E 5 HOH A 236 736 298 HOH HOH . E 5 HOH A 237 737 251 HOH HOH . E 5 HOH A 238 738 71 HOH HOH . E 5 HOH A 239 739 209 HOH HOH . E 5 HOH A 240 740 61 HOH HOH . E 5 HOH A 241 741 314 HOH HOH . E 5 HOH A 242 742 198 HOH HOH . E 5 HOH A 243 743 269 HOH HOH . E 5 HOH A 244 744 304 HOH HOH . E 5 HOH A 245 745 66 HOH HOH . E 5 HOH A 246 746 246 HOH HOH . E 5 HOH A 247 747 111 HOH HOH . E 5 HOH A 248 748 159 HOH HOH . E 5 HOH A 249 749 210 HOH HOH . E 5 HOH A 250 750 54 HOH HOH . E 5 HOH A 251 751 225 HOH HOH . E 5 HOH A 252 752 150 HOH HOH . E 5 HOH A 253 753 241 HOH HOH . E 5 HOH A 254 754 265 HOH HOH . E 5 HOH A 255 755 317 HOH HOH . E 5 HOH A 256 756 10 HOH HOH . E 5 HOH A 257 757 122 HOH HOH . E 5 HOH A 258 758 270 HOH HOH . E 5 HOH A 259 759 239 HOH HOH . E 5 HOH A 260 760 235 HOH HOH . E 5 HOH A 261 761 299 HOH HOH . E 5 HOH A 262 762 102 HOH HOH . E 5 HOH A 263 763 243 HOH HOH . E 5 HOH A 264 764 162 HOH HOH . E 5 HOH A 265 765 301 HOH HOH . E 5 HOH A 266 766 311 HOH HOH . E 5 HOH A 267 767 98 HOH HOH . E 5 HOH A 268 768 244 HOH HOH . E 5 HOH A 269 769 254 HOH HOH . E 5 HOH A 270 770 268 HOH HOH . E 5 HOH A 271 771 221 HOH HOH . E 5 HOH A 272 772 231 HOH HOH . E 5 HOH A 273 773 110 HOH HOH . E 5 HOH A 274 774 256 HOH HOH . E 5 HOH A 275 775 125 HOH HOH . E 5 HOH A 276 776 249 HOH HOH . E 5 HOH A 277 777 295 HOH HOH . E 5 HOH A 278 778 73 HOH HOH . E 5 HOH A 279 779 260 HOH HOH . E 5 HOH A 280 780 219 HOH HOH . E 5 HOH A 281 781 303 HOH HOH . E 5 HOH A 282 782 291 HOH HOH . E 5 HOH A 283 783 70 HOH HOH . E 5 HOH A 284 784 112 HOH HOH . E 5 HOH A 285 785 252 HOH HOH . E 5 HOH A 286 786 272 HOH HOH . E 5 HOH A 287 787 53 HOH HOH . E 5 HOH A 288 788 76 HOH HOH . E 5 HOH A 289 789 330 HOH HOH . E 5 HOH A 290 790 248 HOH HOH . E 5 HOH A 291 791 201 HOH HOH . E 5 HOH A 292 792 100 HOH HOH . E 5 HOH A 293 793 232 HOH HOH . E 5 HOH A 294 794 205 HOH HOH . E 5 HOH A 295 795 258 HOH HOH . E 5 HOH A 296 796 281 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . B 2 4.847 -10.312 27.015 1 14.26 ? PB GDP 401 A 1 HETATM 2 O O1B GDP . . . B 2 5.587 -9.051 27.191 1 16.84 ? O1B GDP 401 A 1 HETATM 3 O O2B GDP . . . B 2 3.426 -10.161 27.49 1 21.26 ? O2B GDP 401 A 1 HETATM 4 O O3B GDP . . . B 2 5.473 -11.548 27.589 1 20.22 ? O3B GDP 401 A 1 HETATM 5 O O3A GDP . . . B 2 4.773 -10.556 25.426 1 15.18 ? O3A GDP 401 A 1 HETATM 6 P PA GDP . . . B 2 4.782 -9.439 24.222 1 14.63 ? PA GDP 401 A 1 HETATM 7 O O1A GDP . . . B 2 6.126 -8.947 23.86 1 16.08 ? O1A GDP 401 A 1 HETATM 8 O O2A GDP . . . B 2 3.798 -8.373 24.545 1 14.3 ? O2A GDP 401 A 1 HETATM 9 O O5' GDP . . . B 2 4.315 -10.304 22.963 1 14.6 ? O5' GDP 401 A 1 HETATM 10 C C5' GDP . . . B 2 3.081 -10.988 23.052 1 15.88 ? C5' GDP 401 A 1 HETATM 11 C C4' GDP . . . B 2 2.457 -11.035 21.661 1 15.05 ? C4' GDP 401 A 1 HETATM 12 O O4' GDP . . . B 2 2.133 -9.704 21.279 1 14.88 ? O4' GDP 401 A 1 HETATM 13 C C3' GDP . . . B 2 3.4 -11.563 20.601 1 14.42 ? C3' GDP 401 A 1 HETATM 14 O O3' GDP . . . B 2 3.285 -12.975 20.582 1 16.44 ? O3' GDP 401 A 1 HETATM 15 C C2' GDP . . . B 2 2.896 -10.854 19.341 1 14.56 ? C2' GDP 401 A 1 HETATM 16 O O2' GDP . . . B 2 1.816 -11.525 18.679 1 14.19 ? O2' GDP 401 A 1 HETATM 17 C C1' GDP . . . B 2 2.324 -9.569 19.829 1 12.73 ? C1' GDP 401 A 1 HETATM 18 N N9 GDP . . . B 2 3.097 -8.345 19.691 1 13.66 ? N9 GDP 401 A 1 HETATM 19 C C8 GDP . . . B 2 4.173 -8.007 20.447 1 13.67 ? C8 GDP 401 A 1 HETATM 20 N N7 GDP . . . B 2 4.544 -6.744 20.182 1 14.59 ? N7 GDP 401 A 1 HETATM 21 C C5 GDP . . . B 2 3.637 -6.25 19.285 1 15.47 ? C5 GDP 401 A 1 HETATM 22 C C6 GDP . . . B 2 3.436 -4.952 18.668 1 16.78 ? C6 GDP 401 A 1 HETATM 23 O O6 GDP . . . B 2 4.183 -3.962 18.849 1 17.82 ? O6 GDP 401 A 1 HETATM 24 N N1 GDP . . . B 2 2.383 -4.893 17.837 1 15.58 ? N1 GDP 401 A 1 HETATM 25 C C2 GDP . . . B 2 1.53 -5.922 17.588 1 15.17 ? C2 GDP 401 A 1 HETATM 26 N N2 GDP . . . B 2 0.516 -5.722 16.702 1 15.43 ? N2 GDP 401 A 1 HETATM 27 N N3 GDP . . . B 2 1.659 -7.142 18.112 1 14.87 ? N3 GDP 401 A 1 HETATM 28 C C4 GDP . . . B 2 2.662 -7.3 19.007 1 14.55 ? C4 GDP 401 A 1 HETATM 29 H H4' GDP . . . B 2 1.584 -11.699 21.722 1 18.06 ? H4' GDP 401 A 1 HETATM 30 H H3' GDP . . . B 2 4.474 -11.377 20.741 1 17.3 ? H3' GDP 401 A 1 HETATM 31 H H2' GDP . . . B 2 3.728 -10.785 18.626 1 17.47 ? H2' GDP 401 A 1 HETATM 32 H HO2' GDP . . . B 2 1.789 -12.449 18.962 1 17.03 ? HO2' GDP 401 A 1 HETATM 33 H H1' GDP . . . B 2 1.441 -9.454 19.185 1 15.28 ? H1' GDP 401 A 1 HETATM 34 H H8 GDP . . . B 2 4.661 -8.661 21.159 1 16.41 ? H8 GDP 401 A 1 HETATM 35 H HN1 GDP . . . B 2 2.207 -3.993 17.347 1 18.7 ? HN1 GDP 401 A 1 HETATM 36 H HN21 GDP . . . B 2 -0.148 -6.461 16.519 1 18.51 ? HN21 GDP 401 A 1 HETATM 37 H HN22 GDP . . . B 2 0.426 -4.834 16.229 1 18.51 ? HN22 GDP 401 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 37 #