data_6RX4
#
_model_server_result.job_id            WBLwYwG2OjYV_vaF8FC1fA 
_model_server_result.datetime_utc      '2025-01-05 06:06:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6rx4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":601}' 
#
_entry.id    6RX4 
#
_exptl.entry_id    6RX4 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              618.503 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'HEME B/C' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6RX4 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6RX4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 19 A HIS 19 1_555 G FE HDD . A HDD 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? 
metalc ? metalc2 A NE2 HIS 186 A HIS 186 1_555 E FE HEB . A HEB 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? 
#
_chem_comp.formula           'C34 H34 Fe N4 O4' 
_chem_comp.formula_weight    618.503 
_chem_comp.id                HEB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'HEME B/C' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'HYBRID BETWEEN B AND C TYPE HEMES (PROTOPORPHYRIN IX CONTAINING FE)' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE NA HEB sing 213 n n 
FE NB HEB sing 214 n n 
FE NC HEB sing 215 n n 
FE ND HEB sing 216 n n 
CHA C1A HEB doub 217 n n 
CHA C4D HEB sing 218 n n 
CHA HHA HEB sing 219 n n 
CHB C4A HEB doub 220 n n 
CHB C1B HEB sing 221 n n 
CHB HHB HEB sing 222 n n 
CHC C4B HEB doub 223 n n 
CHC C1C HEB sing 224 n n 
CHC HHC HEB sing 225 n n 
CHD C4C HEB sing 226 n n 
CHD C1D HEB doub 227 n n 
CHD HHD HEB sing 228 n n 
NA C1A HEB sing 229 n n 
NA C4A HEB sing 230 n n 
C1A C2A HEB sing 231 n n 
C2A C3A HEB doub 232 n n 
C2A CAA HEB sing 233 n n 
C3A C4A HEB sing 234 n n 
C3A CMA HEB sing 235 n n 
CMA HMA1 HEB sing 236 n n 
CMA HMA2 HEB sing 237 n n 
CMA HMA3 HEB sing 238 n n 
CAA CBA HEB sing 239 n n 
CAA HAA1 HEB sing 240 n n 
CAA HAA2 HEB sing 241 n n 
CBA CGA HEB sing 242 n n 
CBA HBA1 HEB sing 243 n n 
CBA HBA2 HEB sing 244 n n 
CGA O1A HEB doub 245 n n 
CGA O2A HEB sing 246 n n 
O2A H2A HEB sing 247 n n 
NB C1B HEB doub 248 n n 
NB C4B HEB sing 249 n n 
C1B C2B HEB sing 250 n n 
C2B C3B HEB doub 251 n n 
C2B CMB HEB sing 252 n n 
C3B C4B HEB sing 253 n n 
C3B CAB HEB sing 254 n n 
CMB HMB1 HEB sing 255 n n 
CMB HMB2 HEB sing 256 n n 
CMB HMB3 HEB sing 257 n n 
CAB CBB HEB sing 258 n n 
CAB HAB HEB sing 259 n n 
CAB HAB2 HEB sing 260 n n 
CBB HBB1 HEB sing 261 n n 
CBB HBB2 HEB sing 262 n n 
CBB HBB3 HEB sing 263 n n 
NC C1C HEB sing 264 n y 
NC C4C HEB sing 265 n y 
C1C C2C HEB doub 266 n y 
C2C C3C HEB sing 267 n y 
C2C CMC HEB sing 268 n n 
C3C C4C HEB doub 269 n y 
C3C CAC HEB sing 270 n n 
CMC HMC1 HEB sing 271 n n 
CMC HMC2 HEB sing 272 n n 
CMC HMC3 HEB sing 273 n n 
CAC CBC HEB doub 274 n n 
CAC HAC HEB sing 275 n n 
CBC HBC1 HEB sing 276 n n 
CBC HBC2 HEB sing 277 n n 
ND C1D HEB sing 278 n n 
ND C4D HEB doub 279 n n 
C1D C2D HEB sing 280 n n 
C2D C3D HEB doub 281 n n 
C2D CMD HEB sing 282 n n 
C3D C4D HEB sing 283 n n 
C3D CAD HEB sing 284 n n 
CMD HMD1 HEB sing 285 n n 
CMD HMD2 HEB sing 286 n n 
CMD HMD3 HEB sing 287 n n 
CAD CBD HEB sing 288 n n 
CAD HAD1 HEB sing 289 n n 
CAD HAD2 HEB sing 290 n n 
CBD CGD HEB sing 291 n n 
CBD HBD1 HEB sing 292 n n 
CBD HBD2 HEB sing 293 n n 
CGD O1D HEB doub 294 n n 
CGD O2D HEB sing 295 n n 
O2D H2D HEB sing 296 n n 
#
_atom_sites.entry_id                     6RX4 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 HEB A 1 601 558 HEB HEB . 
F 5 HEB A 1 602 595 HEB HEB . 
G 6 HDD A 1 603 600 HDD HDD . 
H 7 PEE B 1 701 701 PEE PEE . 
I 8 UQ8 B 1 702 801 UQ8 UQ8 . 
J 9 HOH A 1 701 806 HOH HOH . 
J 9 HOH A 2 702 800 HOH HOH . 
J 9 HOH A 3 703 804 HOH HOH . 
K 9 HOH B 1 801 801 HOH HOH . 
K 9 HOH B 2 802 805 HOH HOH . 
K 9 HOH B 3 803 803 HOH HOH . 
K 9 HOH B 4 804 802 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE HEB . . . E 5 82.92 57.204 78.489 1 52.27 ? FE HEB 601 A 1 
HETATM 2 C CHA HEB . . . E 5 82.418 59.024 75.622 1 52.27 ? CHA HEB 601 A 1 
HETATM 3 C CHB HEB . . . E 5 81.771 54.372 76.947 1 52.27 ? CHB HEB 601 A 1 
HETATM 4 C CHC HEB . . . E 5 83.89 55.485 81.199 1 52.27 ? CHC HEB 601 A 1 
HETATM 5 C CHD HEB . . . E 5 83.431 60.213 80.26 1 52.27 ? CHD HEB 601 A 1 
HETATM 6 N NA HEB . . . E 5 82.23 56.771 76.597 1 52.27 ? NA HEB 601 A 1 
HETATM 7 C C1A HEB . . . E 5 82.117 57.674 75.602 1 52.27 ? C1A HEB 601 A 1 
HETATM 8 C C2A HEB . . . E 5 81.598 56.995 74.452 1 52.27 ? C2A HEB 601 A 1 
HETATM 9 C C3A HEB . . . E 5 81.408 55.679 74.809 1 52.27 ? C3A HEB 601 A 1 
HETATM 10 C C4A HEB . . . E 5 81.813 55.544 76.189 1 52.27 ? C4A HEB 601 A 1 
HETATM 11 C CMA HEB . . . E 5 80.88 54.573 73.936 1 52.27 ? CMA HEB 601 A 1 
HETATM 12 C CAA HEB . . . E 5 81.339 57.666 73.128 1 52.27 ? CAA HEB 601 A 1 
HETATM 13 C CBA HEB . . . E 5 79.98 58.37 73.007 1 52.27 ? CBA HEB 601 A 1 
HETATM 14 C CGA HEB . . . E 5 79.706 58.843 71.587 1 52.27 ? CGA HEB 601 A 1 
HETATM 15 O O1A HEB . . . E 5 80.657 58.834 70.778 1 52.27 ? O1A HEB 601 A 1 
HETATM 16 O O2A HEB . . . E 5 78.541 59.203 71.347 1 52.27 ? O2A HEB 601 A 1 
HETATM 17 N NB HEB . . . E 5 82.836 55.274 78.994 1 52.27 ? NB HEB 601 A 1 
HETATM 18 C C1B HEB . . . E 5 82.323 54.278 78.227 1 52.27 ? C1B HEB 601 A 1 
HETATM 19 C C2B HEB . . . E 5 82.463 53.063 78.985 1 52.27 ? C2B HEB 601 A 1 
HETATM 20 C C3B HEB . . . E 5 83.067 53.392 80.182 1 52.27 ? C3B HEB 601 A 1 
HETATM 21 C C4B HEB . . . E 5 83.289 54.801 80.165 1 52.27 ? C4B HEB 601 A 1 
HETATM 22 C CMB HEB . . . E 5 82.019 51.708 78.51 1 52.27 ? CMB HEB 601 A 1 
HETATM 23 C CAB HEB . . . E 5 83.436 52.524 81.354 1 52.27 ? CAB HEB 601 A 1 
HETATM 24 C CBB HEB . . . E 5 84.617 51.603 81.174 1 52.27 ? CBB HEB 601 A 1 
HETATM 25 N NC HEB . . . E 5 83.562 57.751 80.373 1 52.27 ? NC HEB 601 A 1 
HETATM 26 C C1C HEB . . . E 5 83.905 56.842 81.304 1 52.27 ? C1C HEB 601 A 1 
HETATM 27 C C2C HEB . . . E 5 84.304 57.516 82.5 1 52.27 ? C2C HEB 601 A 1 
HETATM 28 C C3C HEB . . . E 5 84.175 58.847 82.238 1 52.27 ? C3C HEB 601 A 1 
HETATM 29 C C4C HEB . . . E 5 83.697 59.009 80.89 1 52.27 ? C4C HEB 601 A 1 
HETATM 30 C CMC HEB . . . E 5 84.768 56.848 83.761 1 52.27 ? CMC HEB 601 A 1 
HETATM 31 C CAC HEB . . . E 5 84.479 59.947 83.22 1 52.27 ? CAC HEB 601 A 1 
HETATM 32 C CBC HEB . . . E 5 85.743 60.332 83.464 1 52.27 ? CBC HEB 601 A 1 
HETATM 33 N ND HEB . . . E 5 82.918 59.244 78.022 1 52.27 ? ND HEB 601 A 1 
HETATM 34 C C1D HEB . . . E 5 83.135 60.266 78.901 1 52.27 ? C1D HEB 601 A 1 
HETATM 35 C C2D HEB . . . E 5 83.026 61.48 78.155 1 52.27 ? C2D HEB 601 A 1 
HETATM 36 C C3D HEB . . . E 5 82.744 61.165 76.858 1 52.27 ? C3D HEB 601 A 1 
HETATM 37 C C4D HEB . . . E 5 82.676 59.733 76.782 1 52.27 ? C4D HEB 601 A 1 
HETATM 38 C CMD HEB . . . E 5 83.186 62.853 78.705 1 52.27 ? CMD HEB 601 A 1 
HETATM 39 C CAD HEB . . . E 5 82.548 62.156 75.739 1 52.27 ? CAD HEB 601 A 1 
HETATM 40 C CBD HEB . . . E 5 81.146 62.745 75.663 1 52.27 ? CBD HEB 601 A 1 
HETATM 41 C CGD HEB . . . E 5 80.081 61.676 75.557 1 52.27 ? CGD HEB 601 A 1 
HETATM 42 O O1D HEB . . . E 5 79.737 61.339 74.409 1 52.27 ? O1D HEB 601 A 1 
HETATM 43 O O2D HEB . . . E 5 79.627 61.219 76.622 1 52.27 ? O2D HEB 601 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           43 
#