data_6RX4
#
_model_server_result.job_id            RCMP2oB1XxFens3j-qAUIA 
_model_server_result.datetime_utc      '2024-11-04 22:36:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6rx4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":701}' 
#
_entry.id    6RX4 
#
_exptl.entry_id    6RX4 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              744.034 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6RX4 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6RX4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      7 
_struct_asym.id                             H 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 19 A HIS 19 1_555 G FE HDD . A HDD 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? 
metalc ? metalc2 A NE2 HIS 186 A HIS 186 1_555 E FE HEB . A HEB 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? 
#
_chem_comp.formula           'C41 H78 N O8 P' 
_chem_comp.formula_weight    744.034 
_chem_comp.id                PEE 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     DOPE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N C5 PEE sing 405 n n 
C5 C4 PEE sing 406 n n 
C4 O4P PEE sing 407 n n 
O4P P PEE sing 408 n n 
O1P P PEE doub 409 n n 
C1 O3P PEE sing 410 n n 
C1 C2 PEE sing 411 n n 
O3P P PEE sing 412 n n 
P O2P PEE sing 413 n n 
C2 C3 PEE sing 414 n n 
C2 O2 PEE sing 415 n n 
C3 O3 PEE sing 416 n n 
O2 C10 PEE sing 417 n n 
C31 C30 PEE sing 418 n n 
C31 C32 PEE sing 419 n n 
C33 C32 PEE sing 420 n n 
C33 C34 PEE sing 421 n n 
C30 O3 PEE sing 422 n n 
C30 O5 PEE doub 423 n n 
C10 O4 PEE doub 424 n n 
C10 C11 PEE sing 425 n n 
C34 C35 PEE sing 426 n n 
C11 C12 PEE sing 427 n n 
C35 C36 PEE sing 428 n n 
C36 C37 PEE sing 429 n n 
C37 C38 PEE sing 430 n n 
C38 C39 PEE doub 431 z n 
C12 C13 PEE sing 432 n n 
C39 C40 PEE sing 433 n n 
C13 C14 PEE sing 434 n n 
C14 C15 PEE sing 435 n n 
C40 C41 PEE sing 436 n n 
C15 C16 PEE sing 437 n n 
C41 C42 PEE sing 438 n n 
C16 C17 PEE sing 439 n n 
C42 C43 PEE sing 440 n n 
C17 C18 PEE sing 441 n n 
C43 C44 PEE sing 442 n n 
C18 C19 PEE doub 443 z n 
C46 C47 PEE sing 444 n n 
C46 C45 PEE sing 445 n n 
C44 C45 PEE sing 446 n n 
C19 C20 PEE sing 447 n n 
C20 C21 PEE sing 448 n n 
C21 C22 PEE sing 449 n n 
C22 C23 PEE sing 450 n n 
C23 C24 PEE sing 451 n n 
C24 C25 PEE sing 452 n n 
C26 C25 PEE sing 453 n n 
C26 C27 PEE sing 454 n n 
C27 H7 PEE sing 455 n n 
C27 H8 PEE sing 456 n n 
C27 H82 PEE sing 457 n n 
C26 H5 PEE sing 458 n n 
C26 H6 PEE sing 459 n n 
C25 H12 PEE sing 460 n n 
C25 H4 PEE sing 461 n n 
C24 H10 PEE sing 462 n n 
C24 H11 PEE sing 463 n n 
C23 H83 PEE sing 464 n n 
C23 H9 PEE sing 465 n n 
C22 H2 PEE sing 466 n n 
C22 H3 PEE sing 467 n n 
C21 H14 PEE sing 468 n n 
C21 H1 PEE sing 469 n n 
C20 H16 PEE sing 470 n n 
C20 H13 PEE sing 471 n n 
C19 H18 PEE sing 472 n n 
C18 H20 PEE sing 473 n n 
C17 H22 PEE sing 474 n n 
C17 H19 PEE sing 475 n n 
C16 H21 PEE sing 476 n n 
C16 H28 PEE sing 477 n n 
C15 H23 PEE sing 478 n n 
C15 H24 PEE sing 479 n n 
C14 H25 PEE sing 480 n n 
C14 H26 PEE sing 481 n n 
C13 H17 PEE sing 482 n n 
C13 H27 PEE sing 483 n n 
C12 H15 PEE sing 484 n n 
C12 H29 PEE sing 485 n n 
C11 H30 PEE sing 486 n n 
C11 H31 PEE sing 487 n n 
C2 H32 PEE sing 488 n n 
C1 H33 PEE sing 489 n n 
C1 H34 PEE sing 490 n n 
O2P H35 PEE sing 491 n n 
C4 H36 PEE sing 492 n n 
C4 H37 PEE sing 493 n n 
C5 H38 PEE sing 494 n n 
C5 H39 PEE sing 495 n n 
N H40 PEE sing 496 n n 
N H41 PEE sing 497 n n 
C3 H43 PEE sing 498 n n 
C3 H44 PEE sing 499 n n 
C31 H45 PEE sing 500 n n 
C31 H46 PEE sing 501 n n 
C32 H47 PEE sing 502 n n 
C32 H48 PEE sing 503 n n 
C33 H49 PEE sing 504 n n 
C33 H50 PEE sing 505 n n 
C34 H51 PEE sing 506 n n 
C34 H52 PEE sing 507 n n 
C35 H53 PEE sing 508 n n 
C35 H54 PEE sing 509 n n 
C36 H55 PEE sing 510 n n 
C36 H56 PEE sing 511 n n 
C37 H57 PEE sing 512 n n 
C37 H58 PEE sing 513 n n 
C38 H59 PEE sing 514 n n 
C39 H60 PEE sing 515 n n 
C40 H81 PEE sing 516 n n 
C40 H61 PEE sing 517 n n 
C41 H80 PEE sing 518 n n 
C41 H62 PEE sing 519 n n 
C42 H63 PEE sing 520 n n 
C42 H64 PEE sing 521 n n 
C43 H65 PEE sing 522 n n 
C43 H66 PEE sing 523 n n 
C44 H67 PEE sing 524 n n 
C44 H68 PEE sing 525 n n 
C45 H69 PEE sing 526 n n 
C45 H70 PEE sing 527 n n 
C46 H71 PEE sing 528 n n 
C46 H72 PEE sing 529 n n 
C47 H73 PEE sing 530 n n 
C47 H74 PEE sing 531 n n 
C47 H75 PEE sing 532 n n 
#
_atom_sites.entry_id                     6RX4 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 HEB A 1 601 558 HEB HEB . 
F 5 HEB A 1 602 595 HEB HEB . 
G 6 HDD A 1 603 600 HDD HDD . 
H 7 PEE B 1 701 701 PEE PEE . 
I 8 UQ8 B 1 702 801 UQ8 UQ8 . 
J 9 HOH A 1 701 806 HOH HOH . 
J 9 HOH A 2 702 800 HOH HOH . 
J 9 HOH A 3 703 804 HOH HOH . 
K 9 HOH B 1 801 801 HOH HOH . 
K 9 HOH B 2 802 805 HOH HOH . 
K 9 HOH B 3 803 803 HOH HOH . 
K 9 HOH B 4 804 802 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C27 PEE . . . H 7 66.016 95.911 79.809 1 64.26 ? C27 PEE 701 B 1 
HETATM 2 C C26 PEE . . . H 7 66.931 95.18 80.766 1 64.26 ? C26 PEE 701 B 1 
HETATM 3 C C25 PEE . . . H 7 66.846 95.8 82.151 1 64.26 ? C25 PEE 701 B 1 
HETATM 4 C C24 PEE . . . H 7 67.747 95.053 83.121 1 64.26 ? C24 PEE 701 B 1 
HETATM 5 C C23 PEE . . . H 7 67.564 95.582 84.535 1 64.26 ? C23 PEE 701 B 1 
HETATM 6 C C22 PEE . . . H 7 68.387 94.762 85.512 1 64.26 ? C22 PEE 701 B 1 
HETATM 7 C C21 PEE . . . H 7 67.907 94.992 86.939 1 64.26 ? C21 PEE 701 B 1 
HETATM 8 C C20 PEE . . . H 7 68.267 96.394 87.415 1 64.26 ? C20 PEE 701 B 1 
HETATM 9 C C19 PEE . . . H 7 69.775 96.596 87.401 1 64.26 ? C19 PEE 701 B 1 
HETATM 10 C C18 PEE . . . H 7 70.178 97.696 88.373 1 64.26 ? C18 PEE 701 B 1 
HETATM 11 C C17 PEE . . . H 7 69.898 97.256 89.8 1 64.26 ? C17 PEE 701 B 1 
HETATM 12 C C16 PEE . . . H 7 70.601 98.164 90.796 1 64.26 ? C16 PEE 701 B 1 
HETATM 13 C C15 PEE . . . H 7 70.165 97.814 92.207 1 64.26 ? C15 PEE 701 B 1 
HETATM 14 C C14 PEE . . . H 7 70.853 98.71 93.216 1 64.26 ? C14 PEE 701 B 1 
HETATM 15 C C13 PEE . . . H 7 70.093 98.694 94.531 1 64.26 ? C13 PEE 701 B 1 
HETATM 16 C C12 PEE . . . H 7 70.915 99.357 95.612 1 64.26 ? C12 PEE 701 B 1 
HETATM 17 C C11 PEE . . . H 7 70.108 100.42 96.333 1 64.26 ? C11 PEE 701 B 1 
HETATM 18 C C10 PEE . . . H 7 71.065 101.257 97.115 1 64.26 ? C10 PEE 701 B 1 
HETATM 19 O O4 PEE . . . H 7 72.113 100.835 97.567 1 64.26 ? O4 PEE 701 B 1 
HETATM 20 O O2 PEE . . . H 7 70.728 102.554 97.298 1 64.26 ? O2 PEE 701 B 1 
HETATM 21 C C2 PEE . . . H 7 69.837 102.815 98.352 1 64.26 ? C2 PEE 701 B 1 
HETATM 22 C C1 PEE . . . H 7 70.567 103.489 99.518 1 64.26 ? C1 PEE 701 B 1 
HETATM 23 O O3P PEE . . . H 7 69.674 104.286 100.214 1 64.26 ? O3P PEE 701 B 1 
HETATM 24 P P PEE . . . H 7 69.092 103.735 101.656 1 64.26 ? P PEE 701 B 1 
HETATM 25 O O2P PEE . . . H 7 69.83 104.374 102.778 1 64.26 ? O2P PEE 701 B 1 
HETATM 26 O O1P PEE . . . H 7 68.681 102.323 101.494 1 64.26 ? O1P PEE 701 B 1 
HETATM 27 O O4P PEE . . . H 7 67.515 104.534 101.63 1 64.26 ? O4P PEE 701 B 1 
HETATM 28 C C4 PEE . . . H 7 66.436 103.719 101.834 1 64.26 ? C4 PEE 701 B 1 
HETATM 29 C C5 PEE . . . H 7 65.283 104.284 100.972 1 64.26 ? C5 PEE 701 B 1 
HETATM 30 N N PEE . . . H 7 65.206 103.451 99.703 1 64.26 ? N PEE 701 B 1 
HETATM 31 C C3 PEE . . . H 7 68.699 103.699 97.825 1 64.26 ? C3 PEE 701 B 1 
HETATM 32 O O3 PEE . . . H 7 67.751 102.887 97.142 1 64.26 ? O3 PEE 701 B 1 
HETATM 33 C C30 PEE . . . H 7 67.575 103.164 95.832 1 64.26 ? C30 PEE 701 B 1 
HETATM 34 O O5 PEE . . . H 7 67.948 104.232 95.376 1 64.26 ? O5 PEE 701 B 1 
HETATM 35 C C31 PEE . . . H 7 66.899 102.092 95.012 1 64.26 ? C31 PEE 701 B 1 
HETATM 36 C C32 PEE . . . H 7 67.224 102.344 93.543 1 64.26 ? C32 PEE 701 B 1 
HETATM 37 C C33 PEE . . . H 7 66.546 101.336 92.632 1 64.26 ? C33 PEE 701 B 1 
HETATM 38 C C34 PEE . . . H 7 67.208 101.346 91.262 1 64.26 ? C34 PEE 701 B 1 
HETATM 39 C C35 PEE . . . H 7 66.243 100.869 90.192 1 64.26 ? C35 PEE 701 B 1 
HETATM 40 C C36 PEE . . . H 7 66.988 100.611 88.891 1 64.26 ? C36 PEE 701 B 1 
HETATM 41 C C37 PEE . . . H 7 66.031 100.662 87.708 1 64.26 ? C37 PEE 701 B 1 
HETATM 42 C C38 PEE . . . H 7 66.772 100.4 86.403 1 64.26 ? C38 PEE 701 B 1 
HETATM 43 C C39 PEE . . . H 7 66.041 101.062 85.247 1 64.26 ? C39 PEE 701 B 1 
HETATM 44 C C40 PEE . . . H 7 66.392 100.377 83.941 1 64.26 ? C40 PEE 701 B 1 
HETATM 45 C C41 PEE . . . H 7 65.799 101.136 82.758 1 64.26 ? C41 PEE 701 B 1 
HETATM 46 C C42 PEE . . . H 7 66.03 100.357 81.47 1 64.26 ? C42 PEE 701 B 1 
HETATM 47 C C43 PEE . . . H 7 65.327 101.023 80.299 1 64.26 ? C43 PEE 701 B 1 
HETATM 48 C C44 PEE . . . H 7 65.015 99.989 79.226 1 64.26 ? C44 PEE 701 B 1 
HETATM 49 C C45 PEE . . . H 7 64.53 100.66 77.948 1 64.26 ? C45 PEE 701 B 1 
HETATM 50 C C46 PEE . . . H 7 63.214 101.385 78.179 1 64.26 ? C46 PEE 701 B 1 
HETATM 51 C C47 PEE . . . H 7 62.889 102.262 76.987 1 64.26 ? C47 PEE 701 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           267 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           51 
#