data_6RX8 # _model_server_result.job_id NmD-MjsrgTkbUFNkJ0dLxw _model_server_result.datetime_utc '2024-11-12 21:18:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rx8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 6RX8 # _exptl.entry_id 6RX8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 116.072 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FUMARIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6RX8 _cell.length_a 143.16 _cell.length_b 144.23 _cell.length_c 144.451 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RX8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 22 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -143.16 0 0 3 'crystal symmetry operation' 3_455 -x-1,y,-z -1 0 0 0 1 0 0 0 -1 -143.16 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 188 A GLU 188 1_555 D NA NA . A NA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc2 A OE1 GLU 188 A GLU 188 1_555 D NA NA . A NA 603 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc3 D NA NA . A NA 603 1_555 F O HOH . A HOH 710 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc4 D NA NA . A NA 603 1_555 F O HOH . A HOH 710 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc5 E NA NA . A NA 604 1_555 F O HOH . A HOH 824 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.081 ? # _chem_comp.formula 'C4 H4 O4' _chem_comp.formula_weight 116.072 _chem_comp.id FUM _chem_comp.mon_nstd_flag . _chem_comp.name 'FUMARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OXT C FUM sing 83 n n OXT HXT FUM sing 84 n n C O FUM doub 85 n n C C4 FUM sing 86 n n C4 C5 FUM doub 87 e n C4 H4 FUM sing 88 n n C5 C6 FUM sing 89 n n C5 H5 FUM sing 90 n n C6 O7 FUM doub 91 n n C6 O8 FUM sing 92 n n O8 HO8 FUM sing 93 n n # _atom_sites.entry_id 6RX8 _atom_sites.fract_transf_matrix[1][1] 0.006985 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006933 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006923 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FUM A 1 601 601 FUM FMR . C 2 FUM A 1 602 701 FUM FMR . D 3 NA A 1 603 1 NA NA . E 3 NA A 1 604 2 NA NA . F 4 HOH A 1 701 176 HOH HOH . F 4 HOH A 2 702 170 HOH HOH . F 4 HOH A 3 703 128 HOH HOH . F 4 HOH A 4 704 155 HOH HOH . F 4 HOH A 5 705 259 HOH HOH . F 4 HOH A 6 706 139 HOH HOH . F 4 HOH A 7 707 15 HOH HOH . F 4 HOH A 8 708 163 HOH HOH . F 4 HOH A 9 709 177 HOH HOH . F 4 HOH A 10 710 3 HOH HOH . F 4 HOH A 11 711 142 HOH HOH . F 4 HOH A 12 712 64 HOH HOH . F 4 HOH A 13 713 157 HOH HOH . F 4 HOH A 14 714 220 HOH HOH . F 4 HOH A 15 715 237 HOH HOH . F 4 HOH A 16 716 190 HOH HOH . F 4 HOH A 17 717 140 HOH HOH . F 4 HOH A 18 718 156 HOH HOH . F 4 HOH A 19 719 138 HOH HOH . F 4 HOH A 20 720 88 HOH HOH . F 4 HOH A 21 721 234 HOH HOH . F 4 HOH A 22 722 95 HOH HOH . F 4 HOH A 23 723 39 HOH HOH . F 4 HOH A 24 724 175 HOH HOH . F 4 HOH A 25 725 102 HOH HOH . F 4 HOH A 26 726 179 HOH HOH . F 4 HOH A 27 727 106 HOH HOH . F 4 HOH A 28 728 23 HOH HOH . F 4 HOH A 29 729 130 HOH HOH . F 4 HOH A 30 730 70 HOH HOH . F 4 HOH A 31 731 43 HOH HOH . F 4 HOH A 32 732 12 HOH HOH . F 4 HOH A 33 733 110 HOH HOH . F 4 HOH A 34 734 35 HOH HOH . F 4 HOH A 35 735 213 HOH HOH . F 4 HOH A 36 736 172 HOH HOH . F 4 HOH A 37 737 269 HOH HOH . F 4 HOH A 38 738 188 HOH HOH . F 4 HOH A 39 739 90 HOH HOH . F 4 HOH A 40 740 68 HOH HOH . F 4 HOH A 41 741 30 HOH HOH . F 4 HOH A 42 742 27 HOH HOH . F 4 HOH A 43 743 135 HOH HOH . F 4 HOH A 44 744 28 HOH HOH . F 4 HOH A 45 745 251 HOH HOH . F 4 HOH A 46 746 11 HOH HOH . F 4 HOH A 47 747 13 HOH HOH . F 4 HOH A 48 748 29 HOH HOH . F 4 HOH A 49 749 255 HOH HOH . F 4 HOH A 50 750 103 HOH HOH . F 4 HOH A 51 751 222 HOH HOH . F 4 HOH A 52 752 66 HOH HOH . F 4 HOH A 53 753 223 HOH HOH . F 4 HOH A 54 754 193 HOH HOH . F 4 HOH A 55 755 69 HOH HOH . F 4 HOH A 56 756 40 HOH HOH . F 4 HOH A 57 757 22 HOH HOH . F 4 HOH A 58 758 55 HOH HOH . F 4 HOH A 59 759 48 HOH HOH . F 4 HOH A 60 760 123 HOH HOH . F 4 HOH A 61 761 6 HOH HOH . F 4 HOH A 62 762 56 HOH HOH . F 4 HOH A 63 763 239 HOH HOH . F 4 HOH A 64 764 125 HOH HOH . F 4 HOH A 65 765 153 HOH HOH . F 4 HOH A 66 766 132 HOH HOH . F 4 HOH A 67 767 1 HOH HOH . F 4 HOH A 68 768 10 HOH HOH . F 4 HOH A 69 769 204 HOH HOH . F 4 HOH A 70 770 14 HOH HOH . F 4 HOH A 71 771 36 HOH HOH . F 4 HOH A 72 772 20 HOH HOH . F 4 HOH A 73 773 147 HOH HOH . F 4 HOH A 74 774 81 HOH HOH . F 4 HOH A 75 775 92 HOH HOH . F 4 HOH A 76 776 16 HOH HOH . F 4 HOH A 77 777 101 HOH HOH . F 4 HOH A 78 778 5 HOH HOH . F 4 HOH A 79 779 91 HOH HOH . F 4 HOH A 80 780 171 HOH HOH . F 4 HOH A 81 781 212 HOH HOH . F 4 HOH A 82 782 168 HOH HOH . F 4 HOH A 83 783 75 HOH HOH . F 4 HOH A 84 784 121 HOH HOH . F 4 HOH A 85 785 159 HOH HOH . F 4 HOH A 86 786 248 HOH HOH . F 4 HOH A 87 787 148 HOH HOH . F 4 HOH A 88 788 33 HOH HOH . F 4 HOH A 89 789 108 HOH HOH . F 4 HOH A 90 790 201 HOH HOH . F 4 HOH A 91 791 230 HOH HOH . F 4 HOH A 92 792 84 HOH HOH . F 4 HOH A 93 793 144 HOH HOH . F 4 HOH A 94 794 235 HOH HOH . F 4 HOH A 95 795 57 HOH HOH . F 4 HOH A 96 796 37 HOH HOH . F 4 HOH A 97 797 119 HOH HOH . F 4 HOH A 98 798 24 HOH HOH . F 4 HOH A 99 799 181 HOH HOH . F 4 HOH A 100 800 209 HOH HOH . F 4 HOH A 101 801 80 HOH HOH . F 4 HOH A 102 802 62 HOH HOH . F 4 HOH A 103 803 227 HOH HOH . F 4 HOH A 104 804 206 HOH HOH . F 4 HOH A 105 805 145 HOH HOH . F 4 HOH A 106 806 203 HOH HOH . F 4 HOH A 107 807 249 HOH HOH . F 4 HOH A 108 808 63 HOH HOH . F 4 HOH A 109 809 25 HOH HOH . F 4 HOH A 110 810 194 HOH HOH . F 4 HOH A 111 811 252 HOH HOH . F 4 HOH A 112 812 126 HOH HOH . F 4 HOH A 113 813 243 HOH HOH . F 4 HOH A 114 814 26 HOH HOH . F 4 HOH A 115 815 136 HOH HOH . F 4 HOH A 116 816 152 HOH HOH . F 4 HOH A 117 817 31 HOH HOH . F 4 HOH A 118 818 42 HOH HOH . F 4 HOH A 119 819 151 HOH HOH . F 4 HOH A 120 820 260 HOH HOH . F 4 HOH A 121 821 71 HOH HOH . F 4 HOH A 122 822 229 HOH HOH . F 4 HOH A 123 823 85 HOH HOH . F 4 HOH A 124 824 45 HOH HOH . F 4 HOH A 125 825 17 HOH HOH . F 4 HOH A 126 826 74 HOH HOH . F 4 HOH A 127 827 53 HOH HOH . F 4 HOH A 128 828 58 HOH HOH . F 4 HOH A 129 829 115 HOH HOH . F 4 HOH A 130 830 93 HOH HOH . F 4 HOH A 131 831 183 HOH HOH . F 4 HOH A 132 832 253 HOH HOH . F 4 HOH A 133 833 225 HOH HOH . F 4 HOH A 134 834 215 HOH HOH . F 4 HOH A 135 835 216 HOH HOH . F 4 HOH A 136 836 167 HOH HOH . F 4 HOH A 137 837 34 HOH HOH . F 4 HOH A 138 838 133 HOH HOH . F 4 HOH A 139 839 67 HOH HOH . F 4 HOH A 140 840 8 HOH HOH . F 4 HOH A 141 841 241 HOH HOH . F 4 HOH A 142 842 137 HOH HOH . F 4 HOH A 143 843 76 HOH HOH . F 4 HOH A 144 844 19 HOH HOH . F 4 HOH A 145 845 4 HOH HOH . F 4 HOH A 146 846 86 HOH HOH . F 4 HOH A 147 847 73 HOH HOH . F 4 HOH A 148 848 109 HOH HOH . F 4 HOH A 149 849 99 HOH HOH . F 4 HOH A 150 850 129 HOH HOH . F 4 HOH A 151 851 196 HOH HOH . F 4 HOH A 152 852 120 HOH HOH . F 4 HOH A 153 853 116 HOH HOH . F 4 HOH A 154 854 186 HOH HOH . F 4 HOH A 155 855 208 HOH HOH . F 4 HOH A 156 856 83 HOH HOH . F 4 HOH A 157 857 114 HOH HOH . F 4 HOH A 158 858 32 HOH HOH . F 4 HOH A 159 859 7 HOH HOH . F 4 HOH A 160 860 214 HOH HOH . F 4 HOH A 161 861 200 HOH HOH . F 4 HOH A 162 862 44 HOH HOH . F 4 HOH A 163 863 247 HOH HOH . F 4 HOH A 164 864 47 HOH HOH . F 4 HOH A 165 865 50 HOH HOH . F 4 HOH A 166 866 124 HOH HOH . F 4 HOH A 167 867 258 HOH HOH . F 4 HOH A 168 868 224 HOH HOH . F 4 HOH A 169 869 38 HOH HOH . F 4 HOH A 170 870 60 HOH HOH . F 4 HOH A 171 871 250 HOH HOH . F 4 HOH A 172 872 262 HOH HOH . F 4 HOH A 173 873 118 HOH HOH . F 4 HOH A 174 874 104 HOH HOH . F 4 HOH A 175 875 143 HOH HOH . F 4 HOH A 176 876 264 HOH HOH . F 4 HOH A 177 877 113 HOH HOH . F 4 HOH A 178 878 195 HOH HOH . F 4 HOH A 179 879 231 HOH HOH . F 4 HOH A 180 880 49 HOH HOH . F 4 HOH A 181 881 78 HOH HOH . F 4 HOH A 182 882 82 HOH HOH . F 4 HOH A 183 883 107 HOH HOH . F 4 HOH A 184 884 150 HOH HOH . F 4 HOH A 185 885 72 HOH HOH . F 4 HOH A 186 886 54 HOH HOH . F 4 HOH A 187 887 79 HOH HOH . F 4 HOH A 188 888 146 HOH HOH . F 4 HOH A 189 889 9 HOH HOH . F 4 HOH A 190 890 192 HOH HOH . F 4 HOH A 191 891 202 HOH HOH . F 4 HOH A 192 892 178 HOH HOH . F 4 HOH A 193 893 191 HOH HOH . F 4 HOH A 194 894 244 HOH HOH . F 4 HOH A 195 895 182 HOH HOH . F 4 HOH A 196 896 158 HOH HOH . F 4 HOH A 197 897 226 HOH HOH . F 4 HOH A 198 898 185 HOH HOH . F 4 HOH A 199 899 2 HOH HOH . F 4 HOH A 200 900 97 HOH HOH . F 4 HOH A 201 901 218 HOH HOH . F 4 HOH A 202 902 240 HOH HOH . F 4 HOH A 203 903 238 HOH HOH . F 4 HOH A 204 904 160 HOH HOH . F 4 HOH A 205 905 77 HOH HOH . F 4 HOH A 206 906 51 HOH HOH . F 4 HOH A 207 907 180 HOH HOH . F 4 HOH A 208 908 187 HOH HOH . F 4 HOH A 209 909 21 HOH HOH . F 4 HOH A 210 910 189 HOH HOH . F 4 HOH A 211 911 198 HOH HOH . F 4 HOH A 212 912 263 HOH HOH . F 4 HOH A 213 913 246 HOH HOH . F 4 HOH A 214 914 211 HOH HOH . F 4 HOH A 215 915 46 HOH HOH . F 4 HOH A 216 916 94 HOH HOH . F 4 HOH A 217 917 59 HOH HOH . F 4 HOH A 218 918 236 HOH HOH . F 4 HOH A 219 919 245 HOH HOH . F 4 HOH A 220 920 65 HOH HOH . F 4 HOH A 221 921 265 HOH HOH . F 4 HOH A 222 922 89 HOH HOH . F 4 HOH A 223 923 52 HOH HOH . F 4 HOH A 224 924 197 HOH HOH . F 4 HOH A 225 925 18 HOH HOH . F 4 HOH A 226 926 199 HOH HOH . F 4 HOH A 227 927 257 HOH HOH . F 4 HOH A 228 928 217 HOH HOH . F 4 HOH A 229 929 242 HOH HOH . F 4 HOH A 230 930 232 HOH HOH . F 4 HOH A 231 931 233 HOH HOH . F 4 HOH A 232 932 267 HOH HOH . F 4 HOH A 233 933 169 HOH HOH . F 4 HOH A 234 934 112 HOH HOH . F 4 HOH A 235 935 207 HOH HOH . F 4 HOH A 236 936 165 HOH HOH . F 4 HOH A 237 937 210 HOH HOH . F 4 HOH A 238 938 221 HOH HOH . F 4 HOH A 239 939 268 HOH HOH . F 4 HOH A 240 940 122 HOH HOH . F 4 HOH A 241 941 173 HOH HOH . F 4 HOH A 242 942 131 HOH HOH . F 4 HOH A 243 943 184 HOH HOH . F 4 HOH A 244 944 270 HOH HOH . F 4 HOH A 245 945 141 HOH HOH . F 4 HOH A 246 946 166 HOH HOH . F 4 HOH A 247 947 205 HOH HOH . F 4 HOH A 248 948 174 HOH HOH . F 4 HOH A 249 949 256 HOH HOH . F 4 HOH A 250 950 228 HOH HOH . F 4 HOH A 251 951 254 HOH HOH . F 4 HOH A 252 952 162 HOH HOH . F 4 HOH A 253 953 117 HOH HOH . F 4 HOH A 254 954 149 HOH HOH . F 4 HOH A 255 955 105 HOH HOH . F 4 HOH A 256 956 164 HOH HOH . F 4 HOH A 257 957 41 HOH HOH . F 4 HOH A 258 958 219 HOH HOH . F 4 HOH A 259 959 154 HOH HOH . F 4 HOH A 260 960 127 HOH HOH . F 4 HOH A 261 961 161 HOH HOH . F 4 HOH A 262 962 96 HOH HOH . F 4 HOH A 263 963 61 HOH HOH . F 4 HOH A 264 964 87 HOH HOH . F 4 HOH A 265 965 111 HOH HOH . F 4 HOH A 266 966 266 HOH HOH . F 4 HOH A 267 967 100 HOH HOH . F 4 HOH A 268 968 98 HOH HOH . F 4 HOH A 269 969 261 HOH HOH . F 4 HOH A 270 970 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OXT FUM . . . B 2 -79.052 -25.362 14.141 1 19.01 ? OXT FUM 601 A 1 HETATM 2 C C FUM . . . B 2 -79.92 -24.481 14.307 1 19.72 ? C FUM 601 A 1 HETATM 3 O O FUM . . . B 2 -80.597 -24.029 13.35 1 16.84 ? O FUM 601 A 1 HETATM 4 C C4 FUM . . . B 2 -80.121 -24.009 15.696 1 16.5 ? C4 FUM 601 A 1 HETATM 5 C C5 FUM . . . B 2 -81.335 -24.094 16.24 1 20.52 ? C5 FUM 601 A 1 HETATM 6 C C6 FUM . . . B 2 -81.61 -23.654 17.633 1 20.62 ? C6 FUM 601 A 1 HETATM 7 O O7 FUM . . . B 2 -82.793 -23.604 18.046 1 17.01 ? O7 FUM 601 A 1 HETATM 8 O O8 FUM . . . B 2 -80.646 -23.352 18.37 1 17.46 ? O8 FUM 601 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #