data_6RZ5 # _model_server_result.job_id 19HjuVwpvCGO6c66xuglnQ _model_server_result.datetime_utc '2024-11-02 03:23:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rz5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Y","auth_seq_id":2001}' # _entry.id 6RZ5 # _exptl.entry_id 6RZ5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 575.675 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description zafirlukast _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 76.31 _cell.angle_beta 76.68 _cell.angle_gamma 81.21 _cell.entry_id 6RZ5 _cell.length_a 41.59 _cell.length_b 68.58 _cell.length_c 87.39 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RZ5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,SA 1 1 B,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,TA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 Y N N ? 2 QA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 17 A CYS 14 1_555 A SG CYS 379 A CYS 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 99 A CYS 96 1_555 A SG CYS 176 A CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf3 B SG CYS 17 B CYS 14 1_555 B SG CYS 379 B CYS 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 B SG CYS 99 B CYS 96 1_555 B SG CYS 176 B CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc1 A OD1 ASP 72 A ASP 69 1_555 X NA NA . A NA 2022 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc2 A OG SER 113 A SER 110 1_555 X NA NA . A NA 2022 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc3 A OD1 ASN 399 A ASN 287 1_555 X NA NA . A NA 2022 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc4 A OD2 ASP 403 A ASP 291 1_555 X NA NA . A NA 2022 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc5 X NA NA . A NA 2022 1_555 SA O HOH . A HOH 2105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? metalc ? metalc6 B OD1 ASP 72 B ASP 69 1_555 RA NA NA . B NA 2020 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc7 B OG SER 113 B SER 110 1_555 RA NA NA . B NA 2020 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc8 B OD1 ASN 399 B ASN 287 1_555 RA NA NA . B NA 2020 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc9 B OD2 ASP 403 B ASP 291 1_555 RA NA NA . B NA 2020 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc10 RA NA NA . B NA 2020 1_555 TA O HOH . B HOH 2105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? # _chem_comp.formula 'C31 H33 N3 O6 S' _chem_comp.formula_weight 575.675 _chem_comp.id ZLK _chem_comp.mon_nstd_flag . _chem_comp.name zafirlukast _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O33 S32 ZLK doub 530 n n C41 C40 ZLK sing 531 n n C40 C39 ZLK doub 532 n y C40 C35 ZLK sing 533 n y C39 C38 ZLK sing 534 n y S32 C35 ZLK sing 535 n n S32 N31 ZLK sing 536 n n S32 O34 ZLK doub 537 n n C35 C36 ZLK doub 538 n y C38 C37 ZLK doub 539 n y N31 C29 ZLK sing 540 n n C36 C37 ZLK sing 541 n y C26 C25 ZLK doub 542 n y C26 C27 ZLK sing 543 n y C29 C27 ZLK sing 544 n n C29 O30 ZLK doub 545 n n C25 C04 ZLK sing 546 n y C27 C28 ZLK doub 547 n y C09 N08 ZLK sing 548 n n C07 N08 ZLK sing 549 n y C07 C06 ZLK doub 550 n y C04 C05 ZLK sing 551 n n C04 C03 ZLK doub 552 n y N08 C10 ZLK sing 553 n y C28 C03 ZLK sing 554 n y C05 C06 ZLK sing 555 n n C06 C11 ZLK sing 556 n y C03 O02 ZLK sing 557 n n C10 C11 ZLK doub 558 n y C10 C24 ZLK sing 559 n y C11 C12 ZLK sing 560 n y O02 C01 ZLK sing 561 n n C24 C23 ZLK doub 562 n y C12 C13 ZLK doub 563 n y C23 C13 ZLK sing 564 n y C13 N14 ZLK sing 565 n n O16 C15 ZLK doub 566 n n N14 C15 ZLK sing 567 n n C15 O17 ZLK sing 568 n n O17 C18 ZLK sing 569 n n C18 C19 ZLK sing 570 n n C18 C22 ZLK sing 571 n n C19 C20 ZLK sing 572 n n C22 C21 ZLK sing 573 n n C20 C21 ZLK sing 574 n n C01 H1 ZLK sing 575 n n C01 H2 ZLK sing 576 n n C01 H3 ZLK sing 577 n n C05 H4 ZLK sing 578 n n C05 H5 ZLK sing 579 n n C07 H6 ZLK sing 580 n n C09 H7 ZLK sing 581 n n C09 H8 ZLK sing 582 n n C09 H9 ZLK sing 583 n n C12 H10 ZLK sing 584 n n C18 H11 ZLK sing 585 n n C19 H12 ZLK sing 586 n n C19 H13 ZLK sing 587 n n C20 H14 ZLK sing 588 n n C20 H15 ZLK sing 589 n n C21 H16 ZLK sing 590 n n C21 H17 ZLK sing 591 n n C22 H18 ZLK sing 592 n n C22 H19 ZLK sing 593 n n C23 H20 ZLK sing 594 n n C24 H21 ZLK sing 595 n n C25 H22 ZLK sing 596 n n C26 H23 ZLK sing 597 n n C28 H24 ZLK sing 598 n n C36 H25 ZLK sing 599 n n C37 H26 ZLK sing 600 n n C38 H27 ZLK sing 601 n n C39 H28 ZLK sing 602 n n C41 H29 ZLK sing 603 n n C41 H30 ZLK sing 604 n n C41 H31 ZLK sing 605 n n N14 H32 ZLK sing 606 n n N31 H33 ZLK sing 607 n n # _atom_sites.entry_id 6RZ5 _atom_sites.fract_transf_matrix[1][1] 0.024044 _atom_sites.fract_transf_matrix[1][2] -0.003718 _atom_sites.fract_transf_matrix[1][3] -0.005025 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014755 _atom_sites.fract_transf_matrix[2][3] -0.003161 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012026 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZLK A 1 2001 2001 ZLK ZAF . D 3 OLC A 1 2002 1 OLC OLC . E 3 OLC A 1 2003 3 OLC OLC . F 3 OLC A 1 2004 5 OLC OLC . G 3 OLC A 1 2005 10 OLC OLC . H 3 OLC A 1 2006 11 OLC OLC . I 3 OLC A 1 2007 12 OLC OLC . J 3 OLC A 1 2008 14 OLC OLC . K 3 OLC A 1 2009 17 OLC OLC . L 4 OLA A 1 2010 102 OLA OLA . M 4 OLA A 1 2011 103 OLA OLA . N 4 OLA A 1 2012 104 OLA OLA . O 4 OLA A 1 2013 105 OLA OLA . P 4 OLA A 1 2014 108 OLA OLA . Q 4 OLA A 1 2015 109 OLA OLA . R 4 OLA A 1 2016 110 OLA OLA . S 4 OLA A 1 2017 115 OLA OLA . T 4 OLA A 1 2018 116 OLA OLA . U 4 OLA A 1 2019 118 OLA OLA . V 4 OLA A 1 2020 119 OLA OLA . W 5 1PE A 1 2021 201 1PE 1PE . X 6 NA A 1 2022 2001 NA NA . Y 2 ZLK B 1 2001 2001 ZLK ZAF . Z 3 OLC B 1 2002 2 OLC OLC . AA 3 OLC B 1 2003 4 OLC OLC . BA 3 OLC B 1 2004 6 OLC OLC . CA 3 OLC B 1 2005 7 OLC OLC . DA 3 OLC B 1 2006 8 OLC OLC . EA 3 OLC B 1 2007 9 OLC OLC . FA 3 OLC B 1 2008 13 OLC OLC . GA 3 OLC B 1 2009 15 OLC OLC . HA 3 OLC B 1 2010 16 OLC OLC . IA 4 OLA B 1 2011 101 OLA OLA . JA 4 OLA B 1 2012 106 OLA OLA . KA 4 OLA B 1 2013 107 OLA OLA . LA 4 OLA B 1 2014 111 OLA OLA . MA 4 OLA B 1 2015 112 OLA OLA . NA 4 OLA B 1 2016 113 OLA OLA . OA 4 OLA B 1 2017 114 OLA OLA . PA 4 OLA B 1 2018 117 OLA OLA . QA 2 ZLK B 1 2019 301 ZLK ZAF . RA 6 NA B 1 2020 2002 NA NA . SA 7 HOH A 1 2101 2103 HOH HOH . SA 7 HOH A 2 2102 2104 HOH HOH . SA 7 HOH A 3 2103 2110 HOH HOH . SA 7 HOH A 4 2104 2102 HOH HOH . SA 7 HOH A 5 2105 2101 HOH HOH . TA 7 HOH B 1 2101 2107 HOH HOH . TA 7 HOH B 2 2102 2108 HOH HOH . TA 7 HOH B 3 2103 2109 HOH HOH . TA 7 HOH B 4 2104 2106 HOH HOH . TA 7 HOH B 5 2105 2105 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 ZLK . . . Y 2 -15.101 -6.394 -14.353 1 57.85 ? C11 ZLK 2001 B 1 HETATM 2 C C01 ZLK . . . Y 2 -12.912 -10.077 -12.602 1 48.42 ? C01 ZLK 2001 B 1 HETATM 3 C C03 ZLK . . . Y 2 -12.395 -9.125 -14.785 1 49.96 ? C03 ZLK 2001 B 1 HETATM 4 C C04 ZLK . . . Y 2 -12.277 -8.015 -15.694 1 53.15 ? C04 ZLK 2001 B 1 HETATM 5 C C05 ZLK . . . Y 2 -12.654 -6.576 -15.249 1 55.44 ? C05 ZLK 2001 B 1 HETATM 6 C C06 ZLK . . . Y 2 -14.152 -6.401 -15.41 1 58.15 ? C06 ZLK 2001 B 1 HETATM 7 C C07 ZLK . . . Y 2 -14.811 -6.123 -16.605 1 60.79 ? C07 ZLK 2001 B 1 HETATM 8 C C09 ZLK . . . Y 2 -17.135 -5.672 -17.338 1 60.32 ? C09 ZLK 2001 B 1 HETATM 9 C C10 ZLK . . . Y 2 -16.325 -6.115 -14.958 1 60.54 ? C10 ZLK 2001 B 1 HETATM 10 C C12 ZLK . . . Y 2 -14.997 -6.542 -12.929 1 55.32 ? C12 ZLK 2001 B 1 HETATM 11 C C13 ZLK . . . Y 2 -16.14 -6.448 -12.142 1 55.51 ? C13 ZLK 2001 B 1 HETATM 12 C C15 ZLK . . . Y 2 -15.015 -7.093 -9.848 1 54.76 ? C15 ZLK 2001 B 1 HETATM 13 C C18 ZLK . . . Y 2 -14.276 -7.746 -7.585 1 52.39 ? C18 ZLK 2001 B 1 HETATM 14 C C19 ZLK . . . Y 2 -13.034 -6.75 -7.104 1 49 ? C19 ZLK 2001 B 1 HETATM 15 C C20 ZLK . . . Y 2 -13.414 -6.236 -5.894 1 50.49 ? C20 ZLK 2001 B 1 HETATM 16 C C21 ZLK . . . Y 2 -14.271 -7.406 -5.229 1 52.94 ? C21 ZLK 2001 B 1 HETATM 17 C C22 ZLK . . . Y 2 -14.926 -8.187 -6.458 1 51.66 ? C22 ZLK 2001 B 1 HETATM 18 C C23 ZLK . . . Y 2 -17.387 -6.182 -12.767 1 57.57 ? C23 ZLK 2001 B 1 HETATM 19 C C24 ZLK . . . Y 2 -17.487 -6.001 -14.152 1 59.37 ? C24 ZLK 2001 B 1 HETATM 20 C C25 ZLK . . . Y 2 -11.795 -8.158 -17.023 1 54.21 ? C25 ZLK 2001 B 1 HETATM 21 C C26 ZLK . . . Y 2 -11.422 -9.468 -17.468 1 55.63 ? C26 ZLK 2001 B 1 HETATM 22 C C27 ZLK . . . Y 2 -11.6 -10.586 -16.594 1 54.48 ? C27 ZLK 2001 B 1 HETATM 23 C C28 ZLK . . . Y 2 -12.021 -10.418 -15.258 1 50.26 ? C28 ZLK 2001 B 1 HETATM 24 C C29 ZLK . . . Y 2 -11.043 -11.973 -17.03 1 60.36 ? C29 ZLK 2001 B 1 HETATM 25 C C35 ZLK . . . Y 2 -8.462 -13.708 -18.416 1 61.52 ? C35 ZLK 2001 B 1 HETATM 26 C C36 ZLK . . . Y 2 -7.934 -14.699 -17.572 1 61.44 ? C36 ZLK 2001 B 1 HETATM 27 C C37 ZLK . . . Y 2 -6.569 -14.716 -17.247 1 60.2 ? C37 ZLK 2001 B 1 HETATM 28 C C38 ZLK . . . Y 2 -5.736 -13.719 -17.729 1 60.23 ? C38 ZLK 2001 B 1 HETATM 29 C C39 ZLK . . . Y 2 -6.245 -12.731 -18.562 1 60.3 ? C39 ZLK 2001 B 1 HETATM 30 C C40 ZLK . . . Y 2 -7.617 -12.712 -18.908 1 60.73 ? C40 ZLK 2001 B 1 HETATM 31 C C41 ZLK . . . Y 2 -8.109 -11.56 -19.85 1 59.83 ? C41 ZLK 2001 B 1 HETATM 32 N N08 ZLK . . . Y 2 -16.117 -5.987 -16.321 1 61.45 ? N08 ZLK 2001 B 1 HETATM 33 N N14 ZLK . . . Y 2 -16.141 -6.644 -10.678 1 54.37 ? N14 ZLK 2001 B 1 HETATM 34 N N31 ZLK . . . Y 2 -10.969 -12.31 -18.443 1 62.06 ? N31 ZLK 2001 B 1 HETATM 35 O O02 ZLK . . . Y 2 -12.832 -8.947 -13.459 1 49.47 ? O02 ZLK 2001 B 1 HETATM 36 O O16 ZLK . . . Y 2 -14.006 -7.442 -10.356 1 54.74 ? O16 ZLK 2001 B 1 HETATM 37 O O17 ZLK . . . Y 2 -15.189 -7.053 -8.434 1 56.39 ? O17 ZLK 2001 B 1 HETATM 38 O O30 ZLK . . . Y 2 -10.572 -12.685 -16.211 1 63.16 ? O30 ZLK 2001 B 1 HETATM 39 O O33 ZLK . . . Y 2 -10.414 -14.143 -20.225 1 63.53 ? O33 ZLK 2001 B 1 HETATM 40 O O34 ZLK . . . Y 2 -10.887 -14.856 -18.081 1 60.38 ? O34 ZLK 2001 B 1 HETATM 41 S S32 ZLK . . . Y 2 -10.229 -13.793 -18.821 1 61.96 ? S32 ZLK 2001 B 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 41 #