data_6RZ5
#
_model_server_result.job_id            Bcgr6aQd2BUBWFw0R2i2iQ 
_model_server_result.datetime_utc      '2024-11-02 03:30:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6rz5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"IA","auth_seq_id":2011}' 
#
_entry.id    6RZ5 
#
_exptl.entry_id    6RZ5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              282.461 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'OLEIC ACID' 
_entity.pdbx_number_of_molecules    19 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         76.31 
_cell.angle_beta          76.68 
_cell.angle_gamma         81.21 
_cell.entry_id            6RZ5 
_cell.length_a            41.59 
_cell.length_b            68.58 
_cell.length_c            87.39 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6RZ5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,SA 1 1 
B,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,TA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 L N N 
? 4 M N N 
? 4 N N N 
? 4 O N N 
? 4 P N N 
? 4 Q N N 
? 4 R N N 
? 4 S N N 
? 4 T N N 
? 4 U N N 
? 4 V N N 
? 4 IA N N 
? 4 JA N N 
? 4 KA N N 
? 4 LA N N 
? 4 MA N N 
? 4 NA N N 
? 4 OA N N 
? 4 PA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 17 A CYS 14 1_555 A SG CYS 379 A CYS 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 A SG CYS 99 A CYS 96 1_555 A SG CYS 176 A CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf3 B SG CYS 17 B CYS 14 1_555 B SG CYS 379 B CYS 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf4 B SG CYS 99 B CYS 96 1_555 B SG CYS 176 B CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc1 A OD1 ASP 72 A ASP 69 1_555 X NA NA . A NA 2022 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? 
metalc ? metalc2 A OG SER 113 A SER 110 1_555 X NA NA . A NA 2022 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? 
metalc ? metalc3 A OD1 ASN 399 A ASN 287 1_555 X NA NA . A NA 2022 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? 
metalc ? metalc4 A OD2 ASP 403 A ASP 291 1_555 X NA NA . A NA 2022 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? 
metalc ? metalc5 X NA NA . A NA 2022 1_555 SA O HOH . A HOH 2105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? 
metalc ? metalc6 B OD1 ASP 72 B ASP 69 1_555 RA NA NA . B NA 2020 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? 
metalc ? metalc7 B OG SER 113 B SER 110 1_555 RA NA NA . B NA 2020 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? 
metalc ? metalc8 B OD1 ASN 399 B ASN 287 1_555 RA NA NA . B NA 2020 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? 
metalc ? metalc9 B OD2 ASP 403 B ASP 291 1_555 RA NA NA . B NA 2020 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? 
metalc ? metalc10 RA NA NA . B NA 2020 1_555 TA O HOH . B HOH 2105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? 
#
_chem_comp.formula           'C18 H34 O2' 
_chem_comp.formula_weight    282.461 
_chem_comp.id                OLA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'OLEIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 OLA doub 274 n n 
C1 O2 OLA sing 275 n n 
C1 C2 OLA sing 276 n n 
O2 HO2 OLA sing 277 n n 
C2 C3 OLA sing 278 n n 
C2 H21 OLA sing 279 n n 
C2 H22 OLA sing 280 n n 
C3 C4 OLA sing 281 n n 
C3 H31 OLA sing 282 n n 
C3 H32 OLA sing 283 n n 
C4 C5 OLA sing 284 n n 
C4 H41 OLA sing 285 n n 
C4 H42 OLA sing 286 n n 
C5 C6 OLA sing 287 n n 
C5 H51 OLA sing 288 n n 
C5 H52 OLA sing 289 n n 
C6 C7 OLA sing 290 n n 
C6 H61 OLA sing 291 n n 
C6 H62 OLA sing 292 n n 
C7 C8 OLA sing 293 n n 
C7 H71 OLA sing 294 n n 
C7 H72 OLA sing 295 n n 
C8 C9 OLA sing 296 n n 
C8 H81 OLA sing 297 n n 
C8 H82 OLA sing 298 n n 
C9 C10 OLA doub 299 z n 
C9 H9 OLA sing 300 n n 
C10 C11 OLA sing 301 n n 
C10 H10 OLA sing 302 n n 
C11 C12 OLA sing 303 n n 
C11 H111 OLA sing 304 n n 
C11 H112 OLA sing 305 n n 
C12 C13 OLA sing 306 n n 
C12 H121 OLA sing 307 n n 
C12 H122 OLA sing 308 n n 
C13 C14 OLA sing 309 n n 
C13 H131 OLA sing 310 n n 
C13 H132 OLA sing 311 n n 
C14 C15 OLA sing 312 n n 
C14 H141 OLA sing 313 n n 
C14 H142 OLA sing 314 n n 
C15 C16 OLA sing 315 n n 
C15 H151 OLA sing 316 n n 
C15 H152 OLA sing 317 n n 
C16 C17 OLA sing 318 n n 
C16 H161 OLA sing 319 n n 
C16 H162 OLA sing 320 n n 
C17 C18 OLA sing 321 n n 
C17 H171 OLA sing 322 n n 
C17 H172 OLA sing 323 n n 
C18 H181 OLA sing 324 n n 
C18 H182 OLA sing 325 n n 
C18 H183 OLA sing 326 n n 
#
_atom_sites.entry_id                     6RZ5 
_atom_sites.fract_transf_matrix[1][1]    0.024044 
_atom_sites.fract_transf_matrix[1][2]    -0.003718 
_atom_sites.fract_transf_matrix[1][3]    -0.005025 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014755 
_atom_sites.fract_transf_matrix[2][3]    -0.003161 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012026 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZLK A 1 2001 2001 ZLK ZAF . 
D 3 OLC A 1 2002 1 OLC OLC . 
E 3 OLC A 1 2003 3 OLC OLC . 
F 3 OLC A 1 2004 5 OLC OLC . 
G 3 OLC A 1 2005 10 OLC OLC . 
H 3 OLC A 1 2006 11 OLC OLC . 
I 3 OLC A 1 2007 12 OLC OLC . 
J 3 OLC A 1 2008 14 OLC OLC . 
K 3 OLC A 1 2009 17 OLC OLC . 
L 4 OLA A 1 2010 102 OLA OLA . 
M 4 OLA A 1 2011 103 OLA OLA . 
N 4 OLA A 1 2012 104 OLA OLA . 
O 4 OLA A 1 2013 105 OLA OLA . 
P 4 OLA A 1 2014 108 OLA OLA . 
Q 4 OLA A 1 2015 109 OLA OLA . 
R 4 OLA A 1 2016 110 OLA OLA . 
S 4 OLA A 1 2017 115 OLA OLA . 
T 4 OLA A 1 2018 116 OLA OLA . 
U 4 OLA A 1 2019 118 OLA OLA . 
V 4 OLA A 1 2020 119 OLA OLA . 
W 5 1PE A 1 2021 201 1PE 1PE . 
X 6 NA A 1 2022 2001 NA NA . 
Y 2 ZLK B 1 2001 2001 ZLK ZAF . 
Z 3 OLC B 1 2002 2 OLC OLC . 
AA 3 OLC B 1 2003 4 OLC OLC . 
BA 3 OLC B 1 2004 6 OLC OLC . 
CA 3 OLC B 1 2005 7 OLC OLC . 
DA 3 OLC B 1 2006 8 OLC OLC . 
EA 3 OLC B 1 2007 9 OLC OLC . 
FA 3 OLC B 1 2008 13 OLC OLC . 
GA 3 OLC B 1 2009 15 OLC OLC . 
HA 3 OLC B 1 2010 16 OLC OLC . 
IA 4 OLA B 1 2011 101 OLA OLA . 
JA 4 OLA B 1 2012 106 OLA OLA . 
KA 4 OLA B 1 2013 107 OLA OLA . 
LA 4 OLA B 1 2014 111 OLA OLA . 
MA 4 OLA B 1 2015 112 OLA OLA . 
NA 4 OLA B 1 2016 113 OLA OLA . 
OA 4 OLA B 1 2017 114 OLA OLA . 
PA 4 OLA B 1 2018 117 OLA OLA . 
QA 2 ZLK B 1 2019 301 ZLK ZAF . 
RA 6 NA B 1 2020 2002 NA NA . 
SA 7 HOH A 1 2101 2103 HOH HOH . 
SA 7 HOH A 2 2102 2104 HOH HOH . 
SA 7 HOH A 3 2103 2110 HOH HOH . 
SA 7 HOH A 4 2104 2102 HOH HOH . 
SA 7 HOH A 5 2105 2101 HOH HOH . 
TA 7 HOH B 1 2101 2107 HOH HOH . 
TA 7 HOH B 2 2102 2108 HOH HOH . 
TA 7 HOH B 3 2103 2109 HOH HOH . 
TA 7 HOH B 4 2104 2106 HOH HOH . 
TA 7 HOH B 5 2105 2105 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OLA . . . IA 4 3.069 -13.352 -16.545 1 103.16 ? C1 OLA 2011 B 1 
HETATM 2 O O1 OLA . . . IA 4 3.727 -12.763 -17.437 1 104.9 ? O1 OLA 2011 B 1 
HETATM 3 O O2 OLA . . . IA 4 2.317 -14.318 -16.8 1 103.92 ? O2 OLA 2011 B 1 
HETATM 4 C C2 OLA . . . IA 4 3.165 -12.878 -15.108 1 98.98 ? C2 OLA 2011 B 1 
HETATM 5 C C3 OLA . . . IA 4 4.409 -13.45 -14.435 1 95.8 ? C3 OLA 2011 B 1 
HETATM 6 C C4 OLA . . . IA 4 4.28 -13.428 -12.915 1 94.66 ? C4 OLA 2011 B 1 
HETATM 7 C C5 OLA . . . IA 4 4.895 -14.682 -12.303 1 94.67 ? C5 OLA 2011 B 1 
HETATM 8 C C6 OLA . . . IA 4 5.731 -14.419 -11.051 1 93.38 ? C6 OLA 2011 B 1 
HETATM 9 C C7 OLA . . . IA 4 6.025 -15.746 -10.355 1 92.32 ? C7 OLA 2011 B 1 
HETATM 10 C C8 OLA . . . IA 4 6.551 -15.557 -8.935 1 92 ? C8 OLA 2011 B 1 
HETATM 11 C C9 OLA . . . IA 4 6.709 -16.914 -8.283 1 91.32 ? C9 OLA 2011 B 1 
HETATM 12 C C10 OLA . . . IA 4 7.715 -17.165 -7.442 1 90.44 ? C10 OLA 2011 B 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           34 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           12 
#