data_6RZ6 # _model_server_result.job_id 1FOWwuW6dPeh3-AiOaUt6Q _model_server_result.datetime_utc '2024-12-26 17:12:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rz6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2001}' # _entry.id 6RZ6 # _exptl.entry_id 6RZ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 585.02 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2~{S})-8-[[4-[4-(2-chloranyl-5-fluoranyl-phenyl)butoxy]phenyl]carbonylamino]-4-(4-oxidanyl-4-oxidanylidene-butyl)-2,3- dihydro-1,4-benzoxazine-2-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6RZ6 _cell.length_a 69.81 _cell.length_b 170.88 _cell.length_c 85.79 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RZ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 15 A CYS 31 1_555 A SG CYS 362 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 A SG CYS 95 A CYS 111 1_555 A SG CYS 171 A CYS 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? # _chem_comp.formula 'C30 H30 Cl F N2 O7' _chem_comp.formula_weight 585.02 _chem_comp.id KNW _chem_comp.mon_nstd_flag . _chem_comp.name '(2~{S})-8-[[4-[4-(2-chloranyl-5-fluoranyl-phenyl)butoxy]phenyl]carbonylamino]-4-(4-oxidanyl-4-oxidanylidene-butyl)-2,3- dihydro-1,4-benzoxazine-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ONO-2570366 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3 C7 KNW doub 287 n n C7 O4 KNW sing 288 n n C7 C6 KNW sing 289 n n C4 N1 KNW sing 290 n n C4 C5 KNW sing 291 n n C6 C5 KNW sing 292 n n C9 C10 KNW doub 293 n y C9 C8 KNW sing 294 n y N1 C3 KNW sing 295 n n N1 C8 KNW sing 296 n n C10 C11 KNW sing 297 n y C3 C1 KNW sing 298 n n C8 C30 KNW doub 299 n y O1 C2 KNW doub 300 n n C1 C2 KNW sing 301 n n C1 O7 KNW sing 302 n n C11 C12 KNW doub 303 n y C30 C12 KNW sing 304 n y C30 O7 KNW sing 305 n n C2 O2 KNW sing 306 n n C12 N2 KNW sing 307 n n N2 C13 KNW sing 308 n n O5 C13 KNW doub 309 n n C13 C14 KNW sing 310 n n C14 C15 KNW doub 311 n y C14 C29 KNW sing 312 n y C15 C16 KNW sing 313 n y C29 C28 KNW doub 314 n y C16 C17 KNW doub 315 n y C28 C17 KNW sing 316 n y C17 O6 KNW sing 317 n n O6 C18 KNW sing 318 n n C18 C19 KNW sing 319 n n C19 C20 KNW sing 320 n n C20 C21 KNW sing 321 n n CL1 C27 KNW sing 322 n n C21 C22 KNW sing 323 n n C27 C22 KNW doub 324 n y C27 C26 KNW sing 325 n y C22 C23 KNW sing 326 n y C26 C25 KNW doub 327 n y C23 C24 KNW doub 328 n y C25 C24 KNW sing 329 n y C24 F1 KNW sing 330 n n C4 H1 KNW sing 331 n n C4 H2 KNW sing 332 n n C5 H3 KNW sing 333 n n C5 H4 KNW sing 334 n n C6 H5 KNW sing 335 n n C6 H6 KNW sing 336 n n C11 H7 KNW sing 337 n n C9 H8 KNW sing 338 n n C10 H9 KNW sing 339 n n N2 H10 KNW sing 340 n n C3 H11 KNW sing 341 n n C3 H12 KNW sing 342 n n C1 H13 KNW sing 343 n n C15 H14 KNW sing 344 n n C16 H15 KNW sing 345 n n C18 H16 KNW sing 346 n n C18 H17 KNW sing 347 n n C19 H18 KNW sing 348 n n C19 H19 KNW sing 349 n n C20 H20 KNW sing 350 n n C20 H21 KNW sing 351 n n C21 H22 KNW sing 352 n n C21 H23 KNW sing 353 n n C23 H24 KNW sing 354 n n C25 H25 KNW sing 355 n n C26 H26 KNW sing 356 n n C28 H27 KNW sing 357 n n C29 H28 KNW sing 358 n n O2 H29 KNW sing 359 n n O4 H30 KNW sing 360 n n # _atom_sites.entry_id 6RZ6 _atom_sites.fract_transf_matrix[1][1] 0.014325 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005852 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011656 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KNW A 1 2001 2001 KNW DRG . C 3 CLR A 1 2002 2002 CLR CLR . D 4 TLA A 1 2003 2003 TLA TLA . E 5 OLC A 1 2004 1 OLC OLC . F 5 OLC A 1 2005 2 OLC OLC . G 5 OLC A 1 2006 3 OLC OLC . H 5 OLC A 1 2007 4 OLC OLC . I 5 OLC A 1 2008 5 OLC OLC . J 5 OLC A 1 2009 6 OLC OLC . K 5 OLC A 1 2010 7 OLC OLC . L 5 OLC A 1 2011 8 OLC OLC . M 5 OLC A 1 2012 9 OLC OLC . N 5 OLC A 1 2013 10 OLC OLC . O 5 OLC A 1 2014 11 OLC OLC . P 5 OLC A 1 2015 12 OLC OLC . Q 5 OLC A 1 2016 13 OLC OLC . R 5 OLC A 1 2017 14 OLC OLC . S 5 OLC A 1 2018 15 OLC OLC . T 5 OLC A 1 2019 16 OLC OLC . U 6 OLA A 1 2020 101 OLA OLA . V 6 OLA A 1 2021 102 OLA OLA . W 6 OLA A 1 2022 103 OLA OLA . X 6 OLA A 1 2023 104 OLA OLA . Y 6 OLA A 1 2024 105 OLA OLA . Z 6 OLA A 1 2025 106 OLA OLA . AA 6 OLA A 1 2026 107 OLA OLA . BA 6 OLA A 1 2027 108 OLA OLA . CA 6 OLA A 1 2028 109 OLA OLA . DA 6 OLA A 1 2029 110 OLA OLA . EA 7 1PE A 1 2030 201 1PE 1PE . FA 8 HOH A 1 2101 2102 HOH HOH . FA 8 HOH A 2 2102 2134 HOH HOH . FA 8 HOH A 3 2103 2128 HOH HOH . FA 8 HOH A 4 2104 2111 HOH HOH . FA 8 HOH A 5 2105 2116 HOH HOH . FA 8 HOH A 6 2106 2129 HOH HOH . FA 8 HOH A 7 2107 2106 HOH HOH . FA 8 HOH A 8 2108 2123 HOH HOH . FA 8 HOH A 9 2109 2121 HOH HOH . FA 8 HOH A 10 2110 2114 HOH HOH . FA 8 HOH A 11 2111 2107 HOH HOH . FA 8 HOH A 12 2112 2118 HOH HOH . FA 8 HOH A 13 2113 2124 HOH HOH . FA 8 HOH A 14 2114 2117 HOH HOH . FA 8 HOH A 15 2115 2130 HOH HOH . FA 8 HOH A 16 2116 2115 HOH HOH . FA 8 HOH A 17 2117 2132 HOH HOH . FA 8 HOH A 18 2118 2119 HOH HOH . FA 8 HOH A 19 2119 2103 HOH HOH . FA 8 HOH A 20 2120 2131 HOH HOH . FA 8 HOH A 21 2121 2109 HOH HOH . FA 8 HOH A 22 2122 2112 HOH HOH . FA 8 HOH A 23 2123 2104 HOH HOH . FA 8 HOH A 24 2124 2126 HOH HOH . FA 8 HOH A 25 2125 2105 HOH HOH . FA 8 HOH A 26 2126 2110 HOH HOH . FA 8 HOH A 27 2127 2113 HOH HOH . FA 8 HOH A 28 2128 2108 HOH HOH . FA 8 HOH A 29 2129 2101 HOH HOH . FA 8 HOH A 30 2130 2125 HOH HOH . FA 8 HOH A 31 2131 2127 HOH HOH . FA 8 HOH A 32 2132 2135 HOH HOH . FA 8 HOH A 33 2133 2120 HOH HOH . FA 8 HOH A 34 2134 2122 HOH HOH . FA 8 HOH A 35 2135 2133 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 KNW . . . B 2 -18.756 18.83 -19.588 1 59.02 ? C4 KNW 2001 A 1 HETATM 2 C C14 KNW . . . B 2 -25.45 13.589 -19.851 1 49.08 ? C14 KNW 2001 A 1 HETATM 3 C C5 KNW . . . B 2 -17.802 17.895 -18.861 1 54.24 ? C5 KNW 2001 A 1 HETATM 4 C C6 KNW . . . B 2 -16.611 18.627 -18.266 1 52.41 ? C6 KNW 2001 A 1 HETATM 5 C C11 KNW . . . B 2 -23.014 16.743 -17.781 1 46.24 ? C11 KNW 2001 A 1 HETATM 6 C C7 KNW . . . B 2 -15.776 19.337 -19.312 1 54.31 ? C7 KNW 2001 A 1 HETATM 7 C C8 KNW . . . B 2 -20.95 17.706 -19.378 1 50.27 ? C8 KNW 2001 A 1 HETATM 8 C C9 KNW . . . B 2 -21.107 18.148 -18.06 1 47.44 ? C9 KNW 2001 A 1 HETATM 9 C C10 KNW . . . B 2 -22.136 17.675 -17.282 1 46.47 ? C10 KNW 2001 A 1 HETATM 10 C C12 KNW . . . B 2 -22.864 16.262 -19.07 1 46.86 ? C12 KNW 2001 A 1 HETATM 11 C C13 KNW . . . B 2 -24.801 14.662 -19.036 1 50.44 ? C13 KNW 2001 A 1 HETATM 12 N N1 KNW . . . B 2 -19.908 18.125 -20.172 1 56.03 ? N1 KNW 2001 A 1 HETATM 13 N N2 KNW . . . B 2 -23.748 15.293 -19.614 1 48.55 ? N2 KNW 2001 A 1 HETATM 14 C C3 KNW . . . B 2 -19.827 17.758 -21.587 1 50.91 ? C3 KNW 2001 A 1 HETATM 15 C C1 KNW . . . B 2 -21.149 17.169 -22.075 1 50.22 ? C1 KNW 2001 A 1 HETATM 16 C C15 KNW . . . B 2 -24.977 13.173 -21.093 1 51.29 ? C15 KNW 2001 A 1 HETATM 17 C C16 KNW . . . B 2 -25.616 12.17 -21.798 1 48.82 ? C16 KNW 2001 A 1 HETATM 18 C C17 KNW . . . B 2 -26.759 11.581 -21.27 1 50.07 ? C17 KNW 2001 A 1 HETATM 19 C C18 KNW . . . B 2 -26.865 9.936 -23.037 1 51.14 ? C18 KNW 2001 A 1 HETATM 20 C C19 KNW . . . B 2 -27.8 8.84 -23.489 1 47.96 ? C19 KNW 2001 A 1 HETATM 21 C C2 KNW . . . B 2 -20.968 16.422 -23.386 1 57.79 ? C2 KNW 2001 A 1 HETATM 22 C C20 KNW . . . B 2 -28.126 7.808 -22.411 1 40.49 ? C20 KNW 2001 A 1 HETATM 23 C C21 KNW . . . B 2 -29.109 6.744 -22.886 1 41.93 ? C21 KNW 2001 A 1 HETATM 24 C C22 KNW . . . B 2 -29.493 5.833 -21.752 1 41.26 ? C22 KNW 2001 A 1 HETATM 25 C C23 KNW . . . B 2 -28.783 4.669 -21.453 1 42.34 ? C23 KNW 2001 A 1 HETATM 26 C C24 KNW . . . B 2 -29.201 3.874 -20.408 1 48.36 ? C24 KNW 2001 A 1 HETATM 27 C C25 KNW . . . B 2 -30.301 4.159 -19.654 1 46.91 ? C25 KNW 2001 A 1 HETATM 28 C C26 KNW . . . B 2 -31.011 5.305 -19.938 1 45.33 ? C26 KNW 2001 A 1 HETATM 29 C C27 KNW . . . B 2 -30.617 6.117 -20.982 1 43.28 ? C27 KNW 2001 A 1 HETATM 30 C C28 KNW . . . B 2 -27.238 11.987 -20.035 1 44.76 ? C28 KNW 2001 A 1 HETATM 31 C C29 KNW . . . B 2 -26.588 12.982 -19.337 1 43.41 ? C29 KNW 2001 A 1 HETATM 32 C C30 KNW . . . B 2 -21.83 16.744 -19.87 1 46.55 ? C30 KNW 2001 A 1 HETATM 33 F F1 KNW . . . B 2 -28.509 2.742 -20.106 1 45.6 ? F1 KNW 2001 A 1 HETATM 34 O O1 KNW . . . B 2 -20.616 17.03 -24.372 1 63.15 ? O1 KNW 2001 A 1 HETATM 35 O O2 KNW . . . B 2 -21.169 15.226 -23.424 1 58.55 -1 O2 KNW 2001 A 1 HETATM 36 O O3 KNW . . . B 2 -15.696 20.579 -19.264 1 53.5 ? O3 KNW 2001 A 1 HETATM 37 O O4 KNW . . . B 2 -15.227 18.641 -20.188 1 57.58 -1 O4 KNW 2001 A 1 HETATM 38 O O5 KNW . . . B 2 -25.216 14.913 -17.908 1 50.86 ? O5 KNW 2001 A 1 HETATM 39 O O6 KNW . . . B 2 -27.452 10.581 -21.9 1 50.23 ? O6 KNW 2001 A 1 HETATM 40 O O7 KNW . . . B 2 -21.722 16.259 -21.144 1 46.25 ? O7 KNW 2001 A 1 HETATM 41 CL CL1 KNW . . . B 2 -31.574 7.543 -21.293 1 50.82 ? CL1 KNW 2001 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 41 #