data_6RZ6
#
_model_server_result.job_id            VhVRknFh6jA79rA8wcFTMw 
_model_server_result.datetime_utc      '2024-12-26 17:11:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6rz6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":2017}' 
#
_entry.id    6RZ6 
#
_exptl.entry_id    6RZ6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    16 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6RZ6 
_cell.length_a            69.81 
_cell.length_b            170.88 
_cell.length_c            85.79 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6RZ6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
? 5 G N N 
? 5 H N N 
? 5 I N N 
? 5 J N N 
? 5 K N N 
? 5 L N N 
? 5 M N N 
? 5 N N N 
? 5 O N N 
? 5 P N N 
? 5 Q N N 
? 5 R N N 
? 5 S N N 
? 5 T N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 15 A CYS 31 1_555 A SG CYS 362 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 A SG CYS 95 A CYS 111 1_555 A SG CYS 171 A CYS 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 478 n n 
C10 C9 OLC doub 479 n n 
C10 C11 OLC sing 480 n n 
C9 C8 OLC sing 481 n n 
C17 C16 OLC sing 482 z n 
C11 C12 OLC sing 483 n n 
C8 C7 OLC sing 484 n n 
C24 C22 OLC sing 485 n n 
C24 O25 OLC sing 486 n n 
C16 C15 OLC sing 487 n n 
C12 C13 OLC sing 488 n n 
C7 C6 OLC sing 489 n n 
C15 C14 OLC sing 490 n n 
C13 C14 OLC sing 491 n n 
C6 C5 OLC sing 492 n n 
C5 C4 OLC sing 493 n n 
C4 C3 OLC sing 494 n n 
C3 C2 OLC sing 495 n n 
C2 C1 OLC sing 496 n n 
C21 C22 OLC sing 497 n n 
C21 O20 OLC sing 498 n n 
C1 O19 OLC doub 499 n n 
C1 O20 OLC sing 500 n n 
C22 O23 OLC sing 501 n n 
C18 H18 OLC sing 502 n n 
C18 H18A OLC sing 503 n n 
C18 H18B OLC sing 504 n n 
C10 H10 OLC sing 505 n n 
C9 H9 OLC sing 506 n n 
C17 H17 OLC sing 507 n n 
C17 H17A OLC sing 508 n n 
C11 H11 OLC sing 509 n n 
C11 H11A OLC sing 510 n n 
C8 H8 OLC sing 511 n n 
C8 H8A OLC sing 512 n n 
C24 H24 OLC sing 513 n n 
C24 H24A OLC sing 514 n n 
C16 H16 OLC sing 515 n n 
C16 H16A OLC sing 516 n n 
C12 H12 OLC sing 517 n n 
C12 H12A OLC sing 518 n n 
C7 H7 OLC sing 519 n n 
C7 H7A OLC sing 520 n n 
C15 H15 OLC sing 521 n n 
C15 H15A OLC sing 522 n n 
C13 H13 OLC sing 523 n n 
C13 H13A OLC sing 524 n n 
C6 H6 OLC sing 525 n n 
C6 H6A OLC sing 526 n n 
C14 H14 OLC sing 527 n n 
C14 H14A OLC sing 528 n n 
C5 H5 OLC sing 529 n n 
C5 H5A OLC sing 530 n n 
C4 H4 OLC sing 531 n n 
C4 H4A OLC sing 532 n n 
C3 H3 OLC sing 533 n n 
C3 H3A OLC sing 534 n n 
C2 H2 OLC sing 535 n n 
C2 H2A OLC sing 536 n n 
C21 H21 OLC sing 537 n n 
C21 H21A OLC sing 538 n n 
C22 H22 OLC sing 539 n n 
O25 HO25 OLC sing 540 n n 
O23 HO23 OLC sing 541 n n 
#
_atom_sites.entry_id                     6RZ6 
_atom_sites.fract_transf_matrix[1][1]    0.014325 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005852 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011656 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 KNW A 1 2001 2001 KNW DRG . 
C 3 CLR A 1 2002 2002 CLR CLR . 
D 4 TLA A 1 2003 2003 TLA TLA . 
E 5 OLC A 1 2004 1 OLC OLC . 
F 5 OLC A 1 2005 2 OLC OLC . 
G 5 OLC A 1 2006 3 OLC OLC . 
H 5 OLC A 1 2007 4 OLC OLC . 
I 5 OLC A 1 2008 5 OLC OLC . 
J 5 OLC A 1 2009 6 OLC OLC . 
K 5 OLC A 1 2010 7 OLC OLC . 
L 5 OLC A 1 2011 8 OLC OLC . 
M 5 OLC A 1 2012 9 OLC OLC . 
N 5 OLC A 1 2013 10 OLC OLC . 
O 5 OLC A 1 2014 11 OLC OLC . 
P 5 OLC A 1 2015 12 OLC OLC . 
Q 5 OLC A 1 2016 13 OLC OLC . 
R 5 OLC A 1 2017 14 OLC OLC . 
S 5 OLC A 1 2018 15 OLC OLC . 
T 5 OLC A 1 2019 16 OLC OLC . 
U 6 OLA A 1 2020 101 OLA OLA . 
V 6 OLA A 1 2021 102 OLA OLA . 
W 6 OLA A 1 2022 103 OLA OLA . 
X 6 OLA A 1 2023 104 OLA OLA . 
Y 6 OLA A 1 2024 105 OLA OLA . 
Z 6 OLA A 1 2025 106 OLA OLA . 
AA 6 OLA A 1 2026 107 OLA OLA . 
BA 6 OLA A 1 2027 108 OLA OLA . 
CA 6 OLA A 1 2028 109 OLA OLA . 
DA 6 OLA A 1 2029 110 OLA OLA . 
EA 7 1PE A 1 2030 201 1PE 1PE . 
FA 8 HOH A 1 2101 2102 HOH HOH . 
FA 8 HOH A 2 2102 2134 HOH HOH . 
FA 8 HOH A 3 2103 2128 HOH HOH . 
FA 8 HOH A 4 2104 2111 HOH HOH . 
FA 8 HOH A 5 2105 2116 HOH HOH . 
FA 8 HOH A 6 2106 2129 HOH HOH . 
FA 8 HOH A 7 2107 2106 HOH HOH . 
FA 8 HOH A 8 2108 2123 HOH HOH . 
FA 8 HOH A 9 2109 2121 HOH HOH . 
FA 8 HOH A 10 2110 2114 HOH HOH . 
FA 8 HOH A 11 2111 2107 HOH HOH . 
FA 8 HOH A 12 2112 2118 HOH HOH . 
FA 8 HOH A 13 2113 2124 HOH HOH . 
FA 8 HOH A 14 2114 2117 HOH HOH . 
FA 8 HOH A 15 2115 2130 HOH HOH . 
FA 8 HOH A 16 2116 2115 HOH HOH . 
FA 8 HOH A 17 2117 2132 HOH HOH . 
FA 8 HOH A 18 2118 2119 HOH HOH . 
FA 8 HOH A 19 2119 2103 HOH HOH . 
FA 8 HOH A 20 2120 2131 HOH HOH . 
FA 8 HOH A 21 2121 2109 HOH HOH . 
FA 8 HOH A 22 2122 2112 HOH HOH . 
FA 8 HOH A 23 2123 2104 HOH HOH . 
FA 8 HOH A 24 2124 2126 HOH HOH . 
FA 8 HOH A 25 2125 2105 HOH HOH . 
FA 8 HOH A 26 2126 2110 HOH HOH . 
FA 8 HOH A 27 2127 2113 HOH HOH . 
FA 8 HOH A 28 2128 2108 HOH HOH . 
FA 8 HOH A 29 2129 2101 HOH HOH . 
FA 8 HOH A 30 2130 2125 HOH HOH . 
FA 8 HOH A 31 2131 2127 HOH HOH . 
FA 8 HOH A 32 2132 2135 HOH HOH . 
FA 8 HOH A 33 2133 2120 HOH HOH . 
FA 8 HOH A 34 2134 2122 HOH HOH . 
FA 8 HOH A 35 2135 2133 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C9 OLC . . . R 5 -13.533 6.947 -35.127 1 60.25 ? C9 OLC 2017 A 1 
HETATM 2 C C8 OLC . . . R 5 -14.095 8.348 -34.873 1 64.65 ? C8 OLC 2017 A 1 
HETATM 3 C C24 OLC . . . R 5 -14.617 16.851 -42.408 1 109.71 ? C24 OLC 2017 A 1 
HETATM 4 C C7 OLC . . . R 5 -14.599 8.993 -36.167 1 71.92 ? C7 OLC 2017 A 1 
HETATM 5 C C6 OLC . . . R 5 -13.627 10.076 -36.645 1 79.68 ? C6 OLC 2017 A 1 
HETATM 6 C C5 OLC . . . R 5 -14.155 10.786 -37.898 1 86.04 ? C5 OLC 2017 A 1 
HETATM 7 C C4 OLC . . . R 5 -13.078 10.811 -38.99 1 91.24 ? C4 OLC 2017 A 1 
HETATM 8 C C3 OLC . . . R 5 -12.587 12.233 -39.276 1 93.07 ? C3 OLC 2017 A 1 
HETATM 9 C C2 OLC . . . R 5 -12.952 12.653 -40.702 1 96.09 ? C2 OLC 2017 A 1 
HETATM 10 C C21 OLC . . . R 5 -12.342 16.246 -41.563 1 104.17 ? C21 OLC 2017 A 1 
HETATM 11 C C1 OLC . . . R 5 -12.256 13.963 -41.081 1 97.94 ? C1 OLC 2017 A 1 
HETATM 12 C C22 OLC . . . R 5 -13.163 17.302 -42.301 1 107.03 ? C22 OLC 2017 A 1 
HETATM 13 O O19 OLC . . . R 5 -11.114 14.127 -40.82 1 96.86 ? O19 OLC 2017 A 1 
HETATM 14 O O25 OLC . . . R 5 -15.101 17.109 -43.696 1 112.47 ? O25 OLC 2017 A 1 
HETATM 15 O O23 OLC . . . R 5 -13.094 18.517 -41.607 1 107.23 ? O23 OLC 2017 A 1 
HETATM 16 O O20 OLC . . . R 5 -12.936 14.96 -41.732 1 101.1 ? O20 OLC 2017 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           16 
#