data_6RZ7 # _model_server_result.job_id rCs_MAkBMeZbVSLqiTrK8A _model_server_result.datetime_utc '2024-12-23 06:19:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rz7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2001}' # _entry.id 6RZ7 # _exptl.entry_id 6RZ7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 585.02 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2~{S})-8-[[4-[4-(2-chloranyl-5-fluoranyl-phenyl)butoxy]phenyl]carbonylamino]-4-(4-oxidanyl-4-oxidanylidene-butyl)-2,3- dihydro-1,4-benzoxazine-2-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6RZ7 _cell.length_a 81.83 _cell.length_b 142.07 _cell.length_c 171.16 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RZ7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 22 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 15 A CYS 31 1_555 A SG CYS 362 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf2 A SG CYS 95 A CYS 111 1_555 A SG CYS 171 A CYS 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? # _chem_comp.formula 'C30 H30 Cl F N2 O7' _chem_comp.formula_weight 585.02 _chem_comp.id KNW _chem_comp.mon_nstd_flag . _chem_comp.name '(2~{S})-8-[[4-[4-(2-chloranyl-5-fluoranyl-phenyl)butoxy]phenyl]carbonylamino]-4-(4-oxidanyl-4-oxidanylidene-butyl)-2,3- dihydro-1,4-benzoxazine-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ONO-2570366 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3 C7 KNW doub 250 n n C7 O4 KNW sing 251 n n C7 C6 KNW sing 252 n n C4 N1 KNW sing 253 n n C4 C5 KNW sing 254 n n C6 C5 KNW sing 255 n n C9 C10 KNW doub 256 n y C9 C8 KNW sing 257 n y N1 C3 KNW sing 258 n n N1 C8 KNW sing 259 n n C10 C11 KNW sing 260 n y C3 C1 KNW sing 261 n n C8 C30 KNW doub 262 n y O1 C2 KNW doub 263 n n C1 C2 KNW sing 264 n n C1 O7 KNW sing 265 n n C11 C12 KNW doub 266 n y C30 C12 KNW sing 267 n y C30 O7 KNW sing 268 n n C2 O2 KNW sing 269 n n C12 N2 KNW sing 270 n n N2 C13 KNW sing 271 n n O5 C13 KNW doub 272 n n C13 C14 KNW sing 273 n n C14 C15 KNW doub 274 n y C14 C29 KNW sing 275 n y C15 C16 KNW sing 276 n y C29 C28 KNW doub 277 n y C16 C17 KNW doub 278 n y C28 C17 KNW sing 279 n y C17 O6 KNW sing 280 n n O6 C18 KNW sing 281 n n C18 C19 KNW sing 282 n n C19 C20 KNW sing 283 n n C20 C21 KNW sing 284 n n CL1 C27 KNW sing 285 n n C21 C22 KNW sing 286 n n C27 C22 KNW doub 287 n y C27 C26 KNW sing 288 n y C22 C23 KNW sing 289 n y C26 C25 KNW doub 290 n y C23 C24 KNW doub 291 n y C25 C24 KNW sing 292 n y C24 F1 KNW sing 293 n n C4 H1 KNW sing 294 n n C4 H2 KNW sing 295 n n C5 H3 KNW sing 296 n n C5 H4 KNW sing 297 n n C6 H5 KNW sing 298 n n C6 H6 KNW sing 299 n n C11 H7 KNW sing 300 n n C9 H8 KNW sing 301 n n C10 H9 KNW sing 302 n n N2 H10 KNW sing 303 n n C3 H11 KNW sing 304 n n C3 H12 KNW sing 305 n n C1 H13 KNW sing 306 n n C15 H14 KNW sing 307 n n C16 H15 KNW sing 308 n n C18 H16 KNW sing 309 n n C18 H17 KNW sing 310 n n C19 H18 KNW sing 311 n n C19 H19 KNW sing 312 n n C20 H20 KNW sing 313 n n C20 H21 KNW sing 314 n n C21 H22 KNW sing 315 n n C21 H23 KNW sing 316 n n C23 H24 KNW sing 317 n n C25 H25 KNW sing 318 n n C26 H26 KNW sing 319 n n C28 H27 KNW sing 320 n n C29 H28 KNW sing 321 n n O2 H29 KNW sing 322 n n O4 H30 KNW sing 323 n n # _atom_sites.entry_id 6RZ7 _atom_sites.fract_transf_matrix[1][1] 0.01222 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007039 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005842 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KNW A 1 2001 2001 KNW DRG . C 3 CLR A 1 2002 2002 CLR CLR . D 4 OLC A 1 2003 1 OLC OLC . E 4 OLC A 1 2004 2 OLC OLC . F 5 OLA A 1 2005 101 OLA OLA . G 5 OLA A 1 2006 102 OLA OLA . H 5 OLA A 1 2007 103 OLA OLA . I 5 OLA A 1 2008 104 OLA OLA . J 5 OLA A 1 2009 105 OLA OLA . K 5 OLA A 1 2010 106 OLA OLA . L 5 OLA A 1 2011 107 OLA OLA . M 5 OLA A 1 2012 108 OLA OLA . N 5 OLA A 1 2013 109 OLA OLA . O 5 OLA A 1 2014 110 OLA OLA . P 5 OLA A 1 2015 111 OLA OLA . Q 5 OLA A 1 2016 112 OLA OLA . R 5 OLA A 1 2017 113 OLA OLA . S 5 OLA A 1 2018 114 OLA OLA . T 5 OLA A 1 2019 115 OLA OLA . U 5 OLA A 1 2020 116 OLA OLA . V 5 OLA A 1 2021 117 OLA OLA . W 5 OLA A 1 2022 118 OLA OLA . X 5 OLA A 1 2023 120 OLA OLA . Y 5 OLA A 1 2024 121 OLA OLA . Z 5 OLA A 1 2025 122 OLA OLA . AA 6 PGE A 1 2026 201 PGE PGE . BA 7 HOH A 1 2101 2103 HOH HOH . BA 7 HOH A 2 2102 2108 HOH HOH . BA 7 HOH A 3 2103 2110 HOH HOH . BA 7 HOH A 4 2104 2104 HOH HOH . BA 7 HOH A 5 2105 2111 HOH HOH . BA 7 HOH A 6 2106 2109 HOH HOH . BA 7 HOH A 7 2107 2107 HOH HOH . BA 7 HOH A 8 2108 2102 HOH HOH . BA 7 HOH A 9 2109 2119 HOH HOH . BA 7 HOH A 10 2110 2116 HOH HOH . BA 7 HOH A 11 2111 2121 HOH HOH . BA 7 HOH A 12 2112 2114 HOH HOH . BA 7 HOH A 13 2113 2105 HOH HOH . BA 7 HOH A 14 2114 2112 HOH HOH . BA 7 HOH A 15 2115 2115 HOH HOH . BA 7 HOH A 16 2116 2118 HOH HOH . BA 7 HOH A 17 2117 2120 HOH HOH . BA 7 HOH A 18 2118 2101 HOH HOH . BA 7 HOH A 19 2119 2117 HOH HOH . BA 7 HOH A 20 2120 2106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 KNW . . . B 2 -21.206 -19.063 -18.431 1 49.75 ? C4 KNW 2001 A 1 HETATM 2 C C14 KNW . . . B 2 -21.542 -25.946 -13.481 1 48.43 ? C14 KNW 2001 A 1 HETATM 3 C C5 KNW . . . B 2 -21.816 -18.101 -17.426 1 50.18 ? C5 KNW 2001 A 1 HETATM 4 C C6 KNW . . . B 2 -22.35 -16.84 -18.087 1 50.68 ? C6 KNW 2001 A 1 HETATM 5 C C11 KNW . . . B 2 -23.38 -23.272 -16.604 1 48.8 ? C11 KNW 2001 A 1 HETATM 6 C C7 KNW . . . B 2 -21.299 -16.039 -18.835 1 50.03 ? C7 KNW 2001 A 1 HETATM 7 C C8 KNW . . . B 2 -21.604 -21.305 -17.448 1 48.32 ? C8 KNW 2001 A 1 HETATM 8 C C9 KNW . . . B 2 -22.924 -21.339 -17.913 1 48.3 ? C9 KNW 2001 A 1 HETATM 9 C C10 KNW . . . B 2 -23.793 -22.32 -17.501 1 48.1 ? C10 KNW 2001 A 1 HETATM 10 C C12 KNW . . . B 2 -22.09 -23.244 -16.1 1 48.81 ? C12 KNW 2001 A 1 HETATM 11 C C13 KNW . . . B 2 -22.32 -25.212 -14.524 1 49.79 ? C13 KNW 2001 A 1 HETATM 12 N N1 KNW . . . B 2 -20.727 -20.308 -17.807 1 49.01 ? N1 KNW 2001 A 1 HETATM 13 N N2 KNW . . . B 2 -21.651 -24.21 -15.158 1 49.8 ? N2 KNW 2001 A 1 HETATM 14 C C3 KNW . . . B 2 -19.31 -20.371 -17.451 1 48.03 ? C3 KNW 2001 A 1 HETATM 15 C C1 KNW . . . B 2 -18.952 -21.759 -16.949 1 48.47 ? C1 KNW 2001 A 1 HETATM 16 C C15 KNW . . . B 2 -20.262 -25.551 -13.097 1 48.09 ? C15 KNW 2001 A 1 HETATM 17 C C16 KNW . . . B 2 -19.561 -26.246 -12.128 1 47.34 ? C16 KNW 2001 A 1 HETATM 18 C C17 KNW . . . B 2 -20.135 -27.366 -11.539 1 46.77 ? C17 KNW 2001 A 1 HETATM 19 C C18 KNW . . . B 2 -18.261 -27.666 -10.04 1 44.65 ? C18 KNW 2001 A 1 HETATM 20 C C19 KNW . . . B 2 -17.874 -28.654 -8.971 1 44.57 ? C19 KNW 2001 A 1 HETATM 21 C C2 KNW . . . B 2 -17.575 -21.722 -16.314 1 50.32 ? C2 KNW 2001 A 1 HETATM 22 C C20 KNW . . . B 2 -18.997 -28.969 -7.993 1 44.77 ? C20 KNW 2001 A 1 HETATM 23 C C21 KNW . . . B 2 -18.581 -29.977 -6.938 1 45.01 ? C21 KNW 2001 A 1 HETATM 24 C C22 KNW . . . B 2 -19.744 -30.308 -6.048 1 45 ? C22 KNW 2001 A 1 HETATM 25 C C23 KNW . . . B 2 -20.002 -29.601 -4.877 1 44.34 ? C23 KNW 2001 A 1 HETATM 26 C C24 KNW . . . B 2 -21.073 -29.963 -4.095 1 44.41 ? C24 KNW 2001 A 1 HETATM 27 C C25 KNW . . . B 2 -21.904 -31.003 -4.399 1 44.16 ? C25 KNW 2001 A 1 HETATM 28 C C26 KNW . . . B 2 -21.664 -31.713 -5.553 1 45.12 ? C26 KNW 2001 A 1 HETATM 29 C C27 KNW . . . B 2 -20.587 -31.372 -6.354 1 46.37 ? C27 KNW 2001 A 1 HETATM 30 C C28 KNW . . . B 2 -21.408 -27.772 -11.916 1 47.35 ? C28 KNW 2001 A 1 HETATM 31 C C29 KNW . . . B 2 -22.098 -27.071 -12.885 1 47.72 ? C29 KNW 2001 A 1 HETATM 32 C C30 KNW . . . B 2 -21.197 -22.255 -16.513 1 47.78 ? C30 KNW 2001 A 1 HETATM 33 F F1 KNW . . . B 2 -21.315 -29.258 -2.959 1 44.82 ? F1 KNW 2001 A 1 HETATM 34 O O1 KNW . . . B 2 -16.621 -21.362 -16.976 1 50.75 ? O1 KNW 2001 A 1 HETATM 35 O O2 KNW . . . B 2 -17.454 -22.035 -15.151 1 51.14 ? O2 KNW 2001 A 1 HETATM 36 O O3 KNW . . . B 2 -21.449 -15.865 -20.063 1 48.52 ? O3 KNW 2001 A 1 HETATM 37 O O4 KNW . . . B 2 -20.332 -15.596 -18.185 1 50.01 ? O4 KNW 2001 A 1 HETATM 38 O O5 KNW . . . B 2 -23.485 -25.521 -14.755 1 50.51 ? O5 KNW 2001 A 1 HETATM 39 O O6 KNW . . . B 2 -19.508 -28.113 -10.577 1 45.42 ? O6 KNW 2001 A 1 HETATM 40 O O7 KNW . . . B 2 -19.918 -22.255 -16.024 1 47.74 ? O7 KNW 2001 A 1 HETATM 41 CL CL1 KNW . . . B 2 -20.31 -32.314 -7.796 1 48.9 ? CL1 KNW 2001 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 41 #