data_6RZ7 # _model_server_result.job_id gA8XkL1E18vQQRjNu0MmQg _model_server_result.datetime_utc '2024-10-15 11:23:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rz7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"AA","auth_seq_id":2026}' # _entry.id 6RZ7 # _exptl.entry_id 6RZ7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6RZ7 _cell.length_a 81.83 _cell.length_b 142.07 _cell.length_c 171.16 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RZ7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 22 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id AA _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 15 A CYS 31 1_555 A SG CYS 362 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf2 A SG CYS 95 A CYS 111 1_555 A SG CYS 171 A CYS 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 505 n n C1 C2 PGE sing 506 n n C1 H1 PGE sing 507 n n C1 H12 PGE sing 508 n n O1 HO1 PGE sing 509 n n C2 O2 PGE sing 510 n n C2 H2 PGE sing 511 n n C2 H22 PGE sing 512 n n O2 C3 PGE sing 513 n n C3 C4 PGE sing 514 n n C3 H3 PGE sing 515 n n C3 H32 PGE sing 516 n n C4 O3 PGE sing 517 n n C4 H4 PGE sing 518 n n C4 H42 PGE sing 519 n n O4 C6 PGE sing 520 n n O4 HO4 PGE sing 521 n n C6 C5 PGE sing 522 n n C6 H6 PGE sing 523 n n C6 H62 PGE sing 524 n n C5 O3 PGE sing 525 n n C5 H5 PGE sing 526 n n C5 H52 PGE sing 527 n n # _atom_sites.entry_id 6RZ7 _atom_sites.fract_transf_matrix[1][1] 0.01222 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007039 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005842 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KNW A 1 2001 2001 KNW DRG . C 3 CLR A 1 2002 2002 CLR CLR . D 4 OLC A 1 2003 1 OLC OLC . E 4 OLC A 1 2004 2 OLC OLC . F 5 OLA A 1 2005 101 OLA OLA . G 5 OLA A 1 2006 102 OLA OLA . H 5 OLA A 1 2007 103 OLA OLA . I 5 OLA A 1 2008 104 OLA OLA . J 5 OLA A 1 2009 105 OLA OLA . K 5 OLA A 1 2010 106 OLA OLA . L 5 OLA A 1 2011 107 OLA OLA . M 5 OLA A 1 2012 108 OLA OLA . N 5 OLA A 1 2013 109 OLA OLA . O 5 OLA A 1 2014 110 OLA OLA . P 5 OLA A 1 2015 111 OLA OLA . Q 5 OLA A 1 2016 112 OLA OLA . R 5 OLA A 1 2017 113 OLA OLA . S 5 OLA A 1 2018 114 OLA OLA . T 5 OLA A 1 2019 115 OLA OLA . U 5 OLA A 1 2020 116 OLA OLA . V 5 OLA A 1 2021 117 OLA OLA . W 5 OLA A 1 2022 118 OLA OLA . X 5 OLA A 1 2023 120 OLA OLA . Y 5 OLA A 1 2024 121 OLA OLA . Z 5 OLA A 1 2025 122 OLA OLA . AA 6 PGE A 1 2026 201 PGE PGE . BA 7 HOH A 1 2101 2103 HOH HOH . BA 7 HOH A 2 2102 2108 HOH HOH . BA 7 HOH A 3 2103 2110 HOH HOH . BA 7 HOH A 4 2104 2104 HOH HOH . BA 7 HOH A 5 2105 2111 HOH HOH . BA 7 HOH A 6 2106 2109 HOH HOH . BA 7 HOH A 7 2107 2107 HOH HOH . BA 7 HOH A 8 2108 2102 HOH HOH . BA 7 HOH A 9 2109 2119 HOH HOH . BA 7 HOH A 10 2110 2116 HOH HOH . BA 7 HOH A 11 2111 2121 HOH HOH . BA 7 HOH A 12 2112 2114 HOH HOH . BA 7 HOH A 13 2113 2105 HOH HOH . BA 7 HOH A 14 2114 2112 HOH HOH . BA 7 HOH A 15 2115 2115 HOH HOH . BA 7 HOH A 16 2116 2118 HOH HOH . BA 7 HOH A 17 2117 2120 HOH HOH . BA 7 HOH A 18 2118 2101 HOH HOH . BA 7 HOH A 19 2119 2117 HOH HOH . BA 7 HOH A 20 2120 2106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . AA 6 -46.542 -11.636 28.574 1 69.5 ? C1 PGE 2026 A 1 HETATM 2 O O1 PGE . . . AA 6 -47.871 -11.473 28.091 1 68.57 ? O1 PGE 2026 A 1 HETATM 3 C C2 PGE . . . AA 6 -46.167 -10.424 29.403 1 70.82 ? C2 PGE 2026 A 1 HETATM 4 O O2 PGE . . . AA 6 -44.828 -10.547 29.864 1 72.07 ? O2 PGE 2026 A 1 HETATM 5 C C3 PGE . . . AA 6 -43.98 -9.483 29.461 1 72.38 ? C3 PGE 2026 A 1 HETATM 6 C C4 PGE . . . AA 6 -43.105 -9.991 28.326 1 72.39 ? C4 PGE 2026 A 1 HETATM 7 O O4 PGE . . . AA 6 -39.74 -8.207 29.098 1 71.72 ? O4 PGE 2026 A 1 HETATM 8 C C6 PGE . . . AA 6 -39.888 -8.454 27.707 1 71.75 ? C6 PGE 2026 A 1 HETATM 9 C C5 PGE . . . AA 6 -40.95 -9.517 27.527 1 71.93 ? C5 PGE 2026 A 1 HETATM 10 O O3 PGE . . . AA 6 -42.197 -8.982 27.926 1 72.32 ? O3 PGE 2026 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #