data_6RZ9 # _model_server_result.job_id yiNeqMy_DdJXl8M-Anu-bw _model_server_result.datetime_utc '2025-03-01 07:58:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rz9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2002}' # _entry.id 6RZ9 # _exptl.entry_id 6RZ9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6RZ9 _cell.length_a 69.63 _cell.length_b 170.21 _cell.length_c 85.74 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RZ9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 15 A CYS 31 1_555 A SG CYS 362 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 95 A CYS 111 1_555 A SG CYS 171 A CYS 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 107 n n C1 C10 CLR sing 108 n n C1 H11 CLR sing 109 n n C1 H12 CLR sing 110 n n C2 C3 CLR sing 111 n n C2 H21 CLR sing 112 n n C2 H22 CLR sing 113 n n C3 C4 CLR sing 114 n n C3 O1 CLR sing 115 n n C3 H3 CLR sing 116 n n C4 C5 CLR sing 117 n n C4 H41 CLR sing 118 n n C4 H42 CLR sing 119 n n C5 C6 CLR doub 120 n n C5 C10 CLR sing 121 n n C6 C7 CLR sing 122 n n C6 H6 CLR sing 123 n n C7 C8 CLR sing 124 n n C7 H71 CLR sing 125 n n C7 H72 CLR sing 126 n n C8 C9 CLR sing 127 n n C8 C14 CLR sing 128 n n C8 H8 CLR sing 129 n n C9 C10 CLR sing 130 n n C9 C11 CLR sing 131 n n C9 H9 CLR sing 132 n n C10 C19 CLR sing 133 n n C11 C12 CLR sing 134 n n C11 H111 CLR sing 135 n n C11 H112 CLR sing 136 n n C12 C13 CLR sing 137 n n C12 H121 CLR sing 138 n n C12 H122 CLR sing 139 n n C13 C14 CLR sing 140 n n C13 C17 CLR sing 141 n n C13 C18 CLR sing 142 n n C14 C15 CLR sing 143 n n C14 H14 CLR sing 144 n n C15 C16 CLR sing 145 n n C15 H151 CLR sing 146 n n C15 H152 CLR sing 147 n n C16 C17 CLR sing 148 n n C16 H161 CLR sing 149 n n C16 H162 CLR sing 150 n n C17 C20 CLR sing 151 n n C17 H17 CLR sing 152 n n C18 H181 CLR sing 153 n n C18 H182 CLR sing 154 n n C18 H183 CLR sing 155 n n C19 H191 CLR sing 156 n n C19 H192 CLR sing 157 n n C19 H193 CLR sing 158 n n C20 C21 CLR sing 159 n n C20 C22 CLR sing 160 n n C20 H20 CLR sing 161 n n C21 H211 CLR sing 162 n n C21 H212 CLR sing 163 n n C21 H213 CLR sing 164 n n C22 C23 CLR sing 165 n n C22 H221 CLR sing 166 n n C22 H222 CLR sing 167 n n C23 C24 CLR sing 168 n n C23 H231 CLR sing 169 n n C23 H232 CLR sing 170 n n C24 C25 CLR sing 171 n n C24 H241 CLR sing 172 n n C24 H242 CLR sing 173 n n C25 C26 CLR sing 174 n n C25 C27 CLR sing 175 n n C25 H25 CLR sing 176 n n C26 H261 CLR sing 177 n n C26 H262 CLR sing 178 n n C26 H263 CLR sing 179 n n C27 H271 CLR sing 180 n n C27 H272 CLR sing 181 n n C27 H273 CLR sing 182 n n O1 H1 CLR sing 183 n n # _atom_sites.entry_id 6RZ9 _atom_sites.fract_transf_matrix[1][1] 0.014362 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005875 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011663 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KO5 A 1 2001 2001 KO5 DRG . C 3 CLR A 1 2002 2003 CLR CLR . D 4 1PE A 1 2003 2201 1PE 1PE . E 5 OLC A 1 2004 1 OLC OLC . F 5 OLC A 1 2005 2 OLC OLC . G 5 OLC A 1 2006 3 OLC OLC . H 5 OLC A 1 2007 4 OLC OLC . I 5 OLC A 1 2008 5 OLC OLC . J 5 OLC A 1 2009 6 OLC OLC . K 5 OLC A 1 2010 7 OLC OLC . L 5 OLC A 1 2011 8 OLC OLC . M 5 OLC A 1 2012 10 OLC OLC . N 5 OLC A 1 2013 11 OLC OLC . O 5 OLC A 1 2014 12 OLC OLC . P 5 OLC A 1 2015 14 OLC OLC . Q 5 OLC A 1 2016 15 OLC OLC . R 6 OLA A 1 2017 101 OLA OLA . S 6 OLA A 1 2018 102 OLA OLA . T 6 OLA A 1 2019 103 OLA OLA . U 6 OLA A 1 2020 104 OLA OLA . V 6 OLA A 1 2021 107 OLA OLA . W 6 OLA A 1 2022 108 OLA OLA . X 6 OLA A 1 2023 109 OLA OLA . Y 7 HOH A 1 2101 2113 HOH HOH . Y 7 HOH A 2 2102 2102 HOH HOH . Y 7 HOH A 3 2103 2112 HOH HOH . Y 7 HOH A 4 2104 2110 HOH HOH . Y 7 HOH A 5 2105 2103 HOH HOH . Y 7 HOH A 6 2106 2107 HOH HOH . Y 7 HOH A 7 2107 2114 HOH HOH . Y 7 HOH A 8 2108 2108 HOH HOH . Y 7 HOH A 9 2109 2105 HOH HOH . Y 7 HOH A 10 2110 2101 HOH HOH . Y 7 HOH A 11 2111 2106 HOH HOH . Y 7 HOH A 12 2112 2111 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . C 3 -28.514 -11.651 6.033 1 72.17 ? C1 CLR 2002 A 1 HETATM 2 C C2 CLR . . . C 3 -28.934 -12.935 6.735 1 71.39 ? C2 CLR 2002 A 1 HETATM 3 C C3 CLR . . . C 3 -28.482 -14.145 5.931 1 78.23 ? C3 CLR 2002 A 1 HETATM 4 C C4 CLR . . . C 3 -26.96 -14.158 5.925 1 71.64 ? C4 CLR 2002 A 1 HETATM 5 C C5 CLR . . . C 3 -26.45 -12.852 5.358 1 74.63 ? C5 CLR 2002 A 1 HETATM 6 C C6 CLR . . . C 3 -25.502 -12.902 4.408 1 74.77 ? C6 CLR 2002 A 1 HETATM 7 C C7 CLR . . . C 3 -24.982 -11.693 3.668 1 68.57 ? C7 CLR 2002 A 1 HETATM 8 C C8 CLR . . . C 3 -25.244 -10.42 4.451 1 66.9 ? C8 CLR 2002 A 1 HETATM 9 C C9 CLR . . . C 3 -26.687 -10.395 4.941 1 68.54 ? C9 CLR 2002 A 1 HETATM 10 C C10 CLR . . . C 3 -26.999 -11.548 5.887 1 70.62 ? C10 CLR 2002 A 1 HETATM 11 C C11 CLR . . . C 3 -27.029 -9.059 5.601 1 64.79 ? C11 CLR 2002 A 1 HETATM 12 C C12 CLR . . . C 3 -26.704 -7.867 4.704 1 71.72 ? C12 CLR 2002 A 1 HETATM 13 C C13 CLR . . . C 3 -25.239 -7.898 4.292 1 80.81 ? C13 CLR 2002 A 1 HETATM 14 C C14 CLR . . . C 3 -25.021 -9.206 3.561 1 72.26 ? C14 CLR 2002 A 1 HETATM 15 C C15 CLR . . . C 3 -23.654 -9.056 2.913 1 68.13 ? C15 CLR 2002 A 1 HETATM 16 C C16 CLR . . . C 3 -23.613 -7.575 2.535 1 71.45 ? C16 CLR 2002 A 1 HETATM 17 C C17 CLR . . . C 3 -24.799 -6.887 3.226 1 83.03 ? C17 CLR 2002 A 1 HETATM 18 C C18 CLR . . . C 3 -24.312 -7.862 5.511 1 70.16 ? C18 CLR 2002 A 1 HETATM 19 C C19 CLR . . . C 3 -26.365 -11.282 7.249 1 55.81 ? C19 CLR 2002 A 1 HETATM 20 C C20 CLR . . . C 3 -24.466 -5.43 3.601 1 84.44 ? C20 CLR 2002 A 1 HETATM 21 C C21 CLR . . . C 3 -25.375 -4.757 4.626 1 93.91 ? C21 CLR 2002 A 1 HETATM 22 C C22 CLR . . . C 3 -24.554 -4.579 2.339 1 81.29 ? C22 CLR 2002 A 1 HETATM 23 C C23 CLR . . . C 3 -23.204 -4.226 1.728 1 84.74 ? C23 CLR 2002 A 1 HETATM 24 C C24 CLR . . . C 3 -23.304 -4.298 0.207 1 80.69 ? C24 CLR 2002 A 1 HETATM 25 C C25 CLR . . . C 3 -22.816 -3.015 -0.452 1 85.21 ? C25 CLR 2002 A 1 HETATM 26 C C26 CLR . . . C 3 -23.033 -3.066 -1.959 1 82.72 ? C26 CLR 2002 A 1 HETATM 27 C C27 CLR . . . C 3 -23.502 -1.795 0.147 1 95.59 ? C27 CLR 2002 A 1 HETATM 28 O O1 CLR . . . C 3 -28.975 -15.346 6.536 1 87.17 ? O1 CLR 2002 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #