data_6S06 # _model_server_result.job_id DisltOk1wDJCPvKWmdiFfw _model_server_result.datetime_utc '2024-12-12 15:13:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6s06 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 6S06 # _exptl.entry_id 6S06 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6S06 _cell.length_a 44.724 _cell.length_b 68.709 _cell.length_c 80.614 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6S06 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C MG MG . A MG 402 1_555 F O HOH . A HOH 509 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc2 C MG MG . A MG 402 1_555 F O HOH . A HOH 541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc3 C MG MG . A MG 402 1_555 F O HOH . A HOH 550 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc4 C MG MG . A MG 402 1_555 F O HOH . A HOH 594 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc5 C MG MG . A MG 402 1_555 F O HOH . A HOH 691 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc6 C MG MG . A MG 402 1_555 F O HOH . A HOH 713 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc7 D MG MG . A MG 403 1_555 F O HOH . A HOH 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc8 D MG MG . A MG 403 1_555 F O HOH . A HOH 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc9 D MG MG . A MG 403 1_555 F O HOH . A HOH 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc10 D MG MG . A MG 403 1_555 F O HOH . A HOH 689 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc11 D MG MG . A MG 403 1_555 F O HOH . A HOH 705 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc12 D MG MG . A MG 403 1_555 F O HOH . A HOH 732 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc13 E MG MG . A MG 404 1_555 F O HOH . A HOH 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc14 E MG MG . A MG 404 1_555 F O HOH . A HOH 688 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc15 E MG MG . A MG 404 1_555 F O HOH . A HOH 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc16 E MG MG . A MG 404 1_555 F O HOH . A HOH 730 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6S06 _atom_sites.fract_transf_matrix[1][1] 0.022359 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014554 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012405 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 401 1 CL CL . C 3 MG A 1 402 1 MG MG . D 3 MG A 1 403 2 MG MG . E 3 MG A 1 404 3 MG MG . F 4 HOH A 1 501 206 HOH HOH . F 4 HOH A 2 502 86 HOH HOH . F 4 HOH A 3 503 182 HOH HOH . F 4 HOH A 4 504 116 HOH HOH . F 4 HOH A 5 505 227 HOH HOH . F 4 HOH A 6 506 201 HOH HOH . F 4 HOH A 7 507 221 HOH HOH . F 4 HOH A 8 508 198 HOH HOH . F 4 HOH A 9 509 128 HOH HOH . F 4 HOH A 10 510 123 HOH HOH . F 4 HOH A 11 511 109 HOH HOH . F 4 HOH A 12 512 120 HOH HOH . F 4 HOH A 13 513 101 HOH HOH . F 4 HOH A 14 514 58 HOH HOH . F 4 HOH A 15 515 152 HOH HOH . F 4 HOH A 16 516 87 HOH HOH . F 4 HOH A 17 517 103 HOH HOH . F 4 HOH A 18 518 20 HOH HOH . F 4 HOH A 19 519 61 HOH HOH . F 4 HOH A 20 520 108 HOH HOH . F 4 HOH A 21 521 133 HOH HOH . F 4 HOH A 22 522 30 HOH HOH . F 4 HOH A 23 523 122 HOH HOH . F 4 HOH A 24 524 19 HOH HOH . F 4 HOH A 25 525 29 HOH HOH . F 4 HOH A 26 526 44 HOH HOH . F 4 HOH A 27 527 157 HOH HOH . F 4 HOH A 28 528 142 HOH HOH . F 4 HOH A 29 529 25 HOH HOH . F 4 HOH A 30 530 65 HOH HOH . F 4 HOH A 31 531 214 HOH HOH . F 4 HOH A 32 532 32 HOH HOH . F 4 HOH A 33 533 17 HOH HOH . F 4 HOH A 34 534 52 HOH HOH . F 4 HOH A 35 535 77 HOH HOH . F 4 HOH A 36 536 119 HOH HOH . F 4 HOH A 37 537 136 HOH HOH . F 4 HOH A 38 538 188 HOH HOH . F 4 HOH A 39 539 193 HOH HOH . F 4 HOH A 40 540 38 HOH HOH . F 4 HOH A 41 541 124 HOH HOH . F 4 HOH A 42 542 88 HOH HOH . F 4 HOH A 43 543 89 HOH HOH . F 4 HOH A 44 544 178 HOH HOH . F 4 HOH A 45 545 7 HOH HOH . F 4 HOH A 46 546 217 HOH HOH . F 4 HOH A 47 547 53 HOH HOH . F 4 HOH A 48 548 45 HOH HOH . F 4 HOH A 49 549 71 HOH HOH . F 4 HOH A 50 550 126 HOH HOH . F 4 HOH A 51 551 183 HOH HOH . F 4 HOH A 52 552 150 HOH HOH . F 4 HOH A 53 553 99 HOH HOH . F 4 HOH A 54 554 6 HOH HOH . F 4 HOH A 55 555 141 HOH HOH . F 4 HOH A 56 556 181 HOH HOH . F 4 HOH A 57 557 93 HOH HOH . F 4 HOH A 58 558 194 HOH HOH . F 4 HOH A 59 559 10 HOH HOH . F 4 HOH A 60 560 164 HOH HOH . F 4 HOH A 61 561 92 HOH HOH . F 4 HOH A 62 562 96 HOH HOH . F 4 HOH A 63 563 169 HOH HOH . F 4 HOH A 64 564 146 HOH HOH . F 4 HOH A 65 565 113 HOH HOH . F 4 HOH A 66 566 11 HOH HOH . F 4 HOH A 67 567 143 HOH HOH . F 4 HOH A 68 568 159 HOH HOH . F 4 HOH A 69 569 14 HOH HOH . F 4 HOH A 70 570 21 HOH HOH . F 4 HOH A 71 571 27 HOH HOH . F 4 HOH A 72 572 1 HOH HOH . F 4 HOH A 73 573 176 HOH HOH . F 4 HOH A 74 574 81 HOH HOH . F 4 HOH A 75 575 78 HOH HOH . F 4 HOH A 76 576 9 HOH HOH . F 4 HOH A 77 577 132 HOH HOH . F 4 HOH A 78 578 15 HOH HOH . F 4 HOH A 79 579 72 HOH HOH . F 4 HOH A 80 580 84 HOH HOH . F 4 HOH A 81 581 82 HOH HOH . F 4 HOH A 82 582 83 HOH HOH . F 4 HOH A 83 583 24 HOH HOH . F 4 HOH A 84 584 3 HOH HOH . F 4 HOH A 85 585 102 HOH HOH . F 4 HOH A 86 586 54 HOH HOH . F 4 HOH A 87 587 64 HOH HOH . F 4 HOH A 88 588 232 HOH HOH . F 4 HOH A 89 589 189 HOH HOH . F 4 HOH A 90 590 36 HOH HOH . F 4 HOH A 91 591 22 HOH HOH . F 4 HOH A 92 592 66 HOH HOH . F 4 HOH A 93 593 13 HOH HOH . F 4 HOH A 94 594 129 HOH HOH . F 4 HOH A 95 595 195 HOH HOH . F 4 HOH A 96 596 74 HOH HOH . F 4 HOH A 97 597 228 HOH HOH . F 4 HOH A 98 598 55 HOH HOH . F 4 HOH A 99 599 26 HOH HOH . F 4 HOH A 100 600 57 HOH HOH . F 4 HOH A 101 601 137 HOH HOH . F 4 HOH A 102 602 95 HOH HOH . F 4 HOH A 103 603 69 HOH HOH . F 4 HOH A 104 604 46 HOH HOH . F 4 HOH A 105 605 118 HOH HOH . F 4 HOH A 106 606 40 HOH HOH . F 4 HOH A 107 607 67 HOH HOH . F 4 HOH A 108 608 8 HOH HOH . F 4 HOH A 109 609 28 HOH HOH . F 4 HOH A 110 610 60 HOH HOH . F 4 HOH A 111 611 231 HOH HOH . F 4 HOH A 112 612 56 HOH HOH . F 4 HOH A 113 613 43 HOH HOH . F 4 HOH A 114 614 170 HOH HOH . F 4 HOH A 115 615 196 HOH HOH . F 4 HOH A 116 616 35 HOH HOH . F 4 HOH A 117 617 33 HOH HOH . F 4 HOH A 118 618 16 HOH HOH . F 4 HOH A 119 619 2 HOH HOH . F 4 HOH A 120 620 18 HOH HOH . F 4 HOH A 121 621 216 HOH HOH . F 4 HOH A 122 622 213 HOH HOH . F 4 HOH A 123 623 210 HOH HOH . F 4 HOH A 124 624 202 HOH HOH . F 4 HOH A 125 625 59 HOH HOH . F 4 HOH A 126 626 80 HOH HOH . F 4 HOH A 127 627 31 HOH HOH . F 4 HOH A 128 628 111 HOH HOH . F 4 HOH A 129 629 98 HOH HOH . F 4 HOH A 130 630 39 HOH HOH . F 4 HOH A 131 631 115 HOH HOH . F 4 HOH A 132 632 49 HOH HOH . F 4 HOH A 133 633 106 HOH HOH . F 4 HOH A 134 634 70 HOH HOH . F 4 HOH A 135 635 34 HOH HOH . F 4 HOH A 136 636 94 HOH HOH . F 4 HOH A 137 637 230 HOH HOH . F 4 HOH A 138 638 211 HOH HOH . F 4 HOH A 139 639 85 HOH HOH . F 4 HOH A 140 640 68 HOH HOH . F 4 HOH A 141 641 5 HOH HOH . F 4 HOH A 142 642 4 HOH HOH . F 4 HOH A 143 643 48 HOH HOH . F 4 HOH A 144 644 75 HOH HOH . F 4 HOH A 145 645 144 HOH HOH . F 4 HOH A 146 646 208 HOH HOH . F 4 HOH A 147 647 62 HOH HOH . F 4 HOH A 148 648 41 HOH HOH . F 4 HOH A 149 649 51 HOH HOH . F 4 HOH A 150 650 63 HOH HOH . F 4 HOH A 151 651 135 HOH HOH . F 4 HOH A 152 652 174 HOH HOH . F 4 HOH A 153 653 139 HOH HOH . F 4 HOH A 154 654 147 HOH HOH . F 4 HOH A 155 655 107 HOH HOH . F 4 HOH A 156 656 145 HOH HOH . F 4 HOH A 157 657 134 HOH HOH . F 4 HOH A 158 658 73 HOH HOH . F 4 HOH A 159 659 207 HOH HOH . F 4 HOH A 160 660 154 HOH HOH . F 4 HOH A 161 661 23 HOH HOH . F 4 HOH A 162 662 233 HOH HOH . F 4 HOH A 163 663 204 HOH HOH . F 4 HOH A 164 664 160 HOH HOH . F 4 HOH A 165 665 185 HOH HOH . F 4 HOH A 166 666 138 HOH HOH . F 4 HOH A 167 667 153 HOH HOH . F 4 HOH A 168 668 149 HOH HOH . F 4 HOH A 169 669 179 HOH HOH . F 4 HOH A 170 670 37 HOH HOH . F 4 HOH A 171 671 187 HOH HOH . F 4 HOH A 172 672 166 HOH HOH . F 4 HOH A 173 673 200 HOH HOH . F 4 HOH A 174 674 12 HOH HOH . F 4 HOH A 175 675 215 HOH HOH . F 4 HOH A 176 676 155 HOH HOH . F 4 HOH A 177 677 180 HOH HOH . F 4 HOH A 178 678 90 HOH HOH . F 4 HOH A 179 679 42 HOH HOH . F 4 HOH A 180 680 140 HOH HOH . F 4 HOH A 181 681 173 HOH HOH . F 4 HOH A 182 682 114 HOH HOH . F 4 HOH A 183 683 203 HOH HOH . F 4 HOH A 184 684 212 HOH HOH . F 4 HOH A 185 685 47 HOH HOH . F 4 HOH A 186 686 171 HOH HOH . F 4 HOH A 187 687 218 HOH HOH . F 4 HOH A 188 688 117 HOH HOH . F 4 HOH A 189 689 121 HOH HOH . F 4 HOH A 190 690 151 HOH HOH . F 4 HOH A 191 691 125 HOH HOH . F 4 HOH A 192 692 219 HOH HOH . F 4 HOH A 193 693 175 HOH HOH . F 4 HOH A 194 694 110 HOH HOH . F 4 HOH A 195 695 229 HOH HOH . F 4 HOH A 196 696 168 HOH HOH . F 4 HOH A 197 697 184 HOH HOH . F 4 HOH A 198 698 148 HOH HOH . F 4 HOH A 199 699 209 HOH HOH . F 4 HOH A 200 700 165 HOH HOH . F 4 HOH A 201 701 186 HOH HOH . F 4 HOH A 202 702 226 HOH HOH . F 4 HOH A 203 703 76 HOH HOH . F 4 HOH A 204 704 79 HOH HOH . F 4 HOH A 205 705 130 HOH HOH . F 4 HOH A 206 706 100 HOH HOH . F 4 HOH A 207 707 234 HOH HOH . F 4 HOH A 208 708 162 HOH HOH . F 4 HOH A 209 709 163 HOH HOH . F 4 HOH A 210 710 172 HOH HOH . F 4 HOH A 211 711 223 HOH HOH . F 4 HOH A 212 712 190 HOH HOH . F 4 HOH A 213 713 127 HOH HOH . F 4 HOH A 214 714 220 HOH HOH . F 4 HOH A 215 715 158 HOH HOH . F 4 HOH A 216 716 161 HOH HOH . F 4 HOH A 217 717 224 HOH HOH . F 4 HOH A 218 718 112 HOH HOH . F 4 HOH A 219 719 191 HOH HOH . F 4 HOH A 220 720 105 HOH HOH . F 4 HOH A 221 721 222 HOH HOH . F 4 HOH A 222 722 177 HOH HOH . F 4 HOH A 223 723 192 HOH HOH . F 4 HOH A 224 724 91 HOH HOH . F 4 HOH A 225 725 205 HOH HOH . F 4 HOH A 226 726 50 HOH HOH . F 4 HOH A 227 727 199 HOH HOH . F 4 HOH A 228 728 156 HOH HOH . F 4 HOH A 229 729 97 HOH HOH . F 4 HOH A 230 730 104 HOH HOH . F 4 HOH A 231 731 167 HOH HOH . F 4 HOH A 232 732 131 HOH HOH . F 4 HOH A 233 733 225 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -8.965 _atom_site.Cartn_y -10.617 _atom_site.Cartn_z -15.236 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 22.08 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #