data_6S0H
#
_model_server_result.job_id            IaIBtfNBbdei6pu1AWipbQ 
_model_server_result.datetime_utc      '2024-11-25 03:29:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6s0h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":305}' 
#
_entry.id    6S0H 
#
_exptl.entry_id    6S0H 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111.72 
_cell.angle_gamma         90 
_cell.entry_id            6S0H 
_cell.length_a            61.43 
_cell.length_b            72.318 
_cell.length_c            62.933 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6S0H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,Q 1 1 
B,M,N,O,P,R 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 76 A HIS 77 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? 
metalc ? metalc2 A ND1 HIS 78 A HIS 79 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.904 ? 
metalc ? metalc3 A OD2 ASP 80 A ASP 81 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? 
metalc ? metalc4 A NE2 HIS 138 A HIS 139 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? 
metalc ? metalc5 A SG CYS 157 A CYS 158 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? 
metalc ? metalc6 A NE2 HIS 196 A HIS 197 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? 
metalc ? metalc7 C ZN ZN . A ZN 301 1_555 L O4 KQ8 . A KQ8 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? 
metalc ? metalc8 D ZN ZN . A ZN 302 1_555 L O KQ8 . A KQ8 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? 
metalc ? metalc9 D ZN ZN . A ZN 302 1_555 L O3 KQ8 . A KQ8 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.889 ? 
metalc ? metalc10 B NE2 HIS 76 B HIS 77 1_555 N ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? 
metalc ? metalc11 B ND1 HIS 78 B HIS 79 1_555 N ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? 
metalc ? metalc12 B OD2 ASP 80 B ASP 81 1_555 O ZN ZN . B ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? 
metalc ? metalc13 B NE2 HIS 138 B HIS 139 1_555 N ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.95 ? 
metalc ? metalc14 B SG CYS 157 B CYS 158 1_555 O ZN ZN . B ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? 
metalc ? metalc15 B NE2 HIS 196 B HIS 197 1_555 O ZN ZN . B ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? 
metalc ? metalc16 N ZN ZN . B ZN 402 1_555 P O3 KQ8 . B KQ8 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? 
metalc ? metalc17 O ZN ZN . B ZN 403 1_555 P O KQ8 . B KQ8 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6S0H 
_atom_sites.fract_transf_matrix[1][1]    0.016279 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006485 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013828 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017104 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 301 3 ZN ZN . 
D 2 ZN A 1 302 4 ZN ZN . 
E 3 EDO A 1 303 2 EDO EDO . 
F 3 EDO A 1 304 3 EDO EDO . 
G 3 EDO A 1 305 4 EDO EDO . 
H 3 EDO A 1 306 5 EDO EDO . 
I 3 EDO A 1 307 6 EDO EDO . 
J 3 EDO A 1 308 8 EDO EDO . 
K 3 EDO A 1 309 9 EDO EDO . 
L 4 KQ8 A 1 310 2 KQ8 DD2 . 
M 3 EDO B 1 401 401 EDO EDO . 
N 2 ZN B 1 402 1 ZN ZN . 
O 2 ZN B 1 403 2 ZN ZN . 
P 4 KQ8 B 1 404 1 KQ8 DD2 . 
Q 5 HOH A 1 401 24 HOH HOH . 
Q 5 HOH A 2 402 3 HOH HOH . 
Q 5 HOH A 3 403 20 HOH HOH . 
Q 5 HOH A 4 404 27 HOH HOH . 
Q 5 HOH A 5 405 4 HOH HOH . 
Q 5 HOH A 6 406 6 HOH HOH . 
Q 5 HOH A 7 407 28 HOH HOH . 
Q 5 HOH A 8 408 23 HOH HOH . 
Q 5 HOH A 9 409 25 HOH HOH . 
Q 5 HOH A 10 410 10 HOH HOH . 
Q 5 HOH A 11 411 7 HOH HOH . 
Q 5 HOH A 12 412 2 HOH HOH . 
Q 5 HOH A 13 413 1 HOH HOH . 
Q 5 HOH A 14 414 30 HOH HOH . 
R 5 HOH B 1 501 21 HOH HOH . 
R 5 HOH B 2 502 19 HOH HOH . 
R 5 HOH B 3 503 14 HOH HOH . 
R 5 HOH B 4 504 32 HOH HOH . 
R 5 HOH B 5 505 26 HOH HOH . 
R 5 HOH B 6 506 29 HOH HOH . 
R 5 HOH B 7 507 22 HOH HOH . 
R 5 HOH B 8 508 12 HOH HOH . 
R 5 HOH B 9 509 11 HOH HOH . 
R 5 HOH B 10 510 31 HOH HOH . 
R 5 HOH B 11 511 5 HOH HOH . 
R 5 HOH B 12 512 15 HOH HOH . 
R 5 HOH B 13 513 13 HOH HOH . 
R 5 HOH B 14 514 8 HOH HOH . 
R 5 HOH B 15 515 18 HOH HOH . 
R 5 HOH B 16 516 16 HOH HOH . 
R 5 HOH B 17 517 17 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . G 3 19.775 14.176 30.564 1 78.54 ? C1 EDO 305 A 1 
HETATM 2 O O1 EDO . . . G 3 19.672 14.656 31.904 1 71.92 ? O1 EDO 305 A 1 
HETATM 3 C C2 EDO . . . G 3 18.957 12.957 30.272 1 77.32 ? C2 EDO 305 A 1 
HETATM 4 O O2 EDO . . . G 3 17.941 13.141 29.292 1 70.67 ? O2 EDO 305 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           4 
#