data_6S0Q # _model_server_result.job_id FrxR0LU6XlP2kGMZCkT0-w _model_server_result.datetime_utc '2024-11-13 03:00:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6s0q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1209}' # _entry.id 6S0Q # _exptl.entry_id 6S0Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6S0Q _cell.length_a 40.34 _cell.length_b 180.66 _cell.length_c 143.05 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6S0Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 80 A CYS 71 1_555 A SG CYS 168 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf2 A SG CYS 83 A CYS 74 1_555 A SG CYS 155 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf3 A SG CYS 86 A CYS 77 1_555 A SG CYS 175 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 A SG CYS 364 A CYS 259 1_555 A SG CYS 367 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLB _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O19 OLB doub 365 n n C1 O20 OLB sing 366 n n C2 C1 OLB sing 367 n n C3 C2 OLB sing 368 n n C4 C3 OLB sing 369 n n C5 C4 OLB sing 370 n n C5 C6 OLB sing 371 n n O20 C21 OLB sing 372 n n C21 C22 OLB sing 373 n n C22 C24 OLB sing 374 n n O23 C22 OLB sing 375 n n C24 O25 OLB sing 376 n n C6 C7 OLB sing 377 n n C7 C8 OLB sing 378 n n C8 C9 OLB sing 379 n n C9 C10 OLB doub 380 z n C10 C11 OLB sing 381 n n C2 H2 OLB sing 382 n n C2 H2A OLB sing 383 n n C3 H3 OLB sing 384 n n C3 H3A OLB sing 385 n n C4 H4 OLB sing 386 n n C4 H4A OLB sing 387 n n C5 H5 OLB sing 388 n n C5 H5A OLB sing 389 n n C21 H21 OLB sing 390 n n C21 H21A OLB sing 391 n n C22 H22 OLB sing 392 n n O23 HO23 OLB sing 393 n n C24 H24 OLB sing 394 n n C24 H24A OLB sing 395 n n O25 HO25 OLB sing 396 n n C6 H16 OLB sing 397 n n C6 H17 OLB sing 398 n n C7 H18 OLB sing 399 n n C7 H19 OLB sing 400 n n C8 H20 OLB sing 401 n n C8 H211 OLB sing 402 n n C9 H221 OLB sing 403 n n C10 H23 OLB sing 404 n n C11 H241 OLB sing 405 n n C11 H25 OLB sing 406 n n C11 C12 OLB sing 407 n n C12 H26 OLB sing 408 n n C12 C13 OLB sing 409 n n C12 H27 OLB sing 410 n n C13 C14 OLB sing 411 n n C13 H28 OLB sing 412 n n C13 H29 OLB sing 413 n n C14 H30 OLB sing 414 n n C14 H31 OLB sing 415 n n C14 C15 OLB sing 416 n n C15 C16 OLB sing 417 n n C15 H32 OLB sing 418 n n C15 H33 OLB sing 419 n n C16 H34 OLB sing 420 n n C16 H35 OLB sing 421 n n C16 C17 OLB sing 422 n n C17 C18 OLB sing 423 n n C17 H36 OLB sing 424 n n C17 H37 OLB sing 425 n n C18 H38 OLB sing 426 n n C18 H39 OLB sing 427 n n C18 H40 OLB sing 428 n n # _atom_sites.entry_id 6S0Q _atom_sites.fract_transf_matrix[1][1] 0.024789 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005535 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006991 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZMA A 1 1201 1202 ZMA ZMA . C 3 OLA A 1 1202 1203 OLA OLA . D 3 OLA A 1 1203 1204 OLA OLA . E 3 OLA A 1 1204 1205 OLA OLA . F 3 OLA A 1 1205 1206 OLA OLA . G 3 OLA A 1 1206 1211 OLA OLA . H 3 OLA A 1 1207 1212 OLA OLA . I 3 OLA A 1 1208 1213 OLA OLA . J 4 OLB A 1 1209 1218 OLB OLB . K 4 OLB A 1 1210 1219 OLB OLB . L 5 OLC A 1 1211 1220 OLC OLC . M 5 OLC A 1 1212 1221 OLC OLC . N 6 CLR A 1 1213 1222 CLR CLR . O 6 CLR A 1 1214 1223 CLR CLR . P 6 CLR A 1 1215 1224 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLB . . . J 4 -17.718 8.108 116.705 1 97.18 ? C1 OLB 1209 A 1 HETATM 2 C C2 OLB . . . J 4 -17.237 6.892 117.498 1 87.69 ? C2 OLB 1209 A 1 HETATM 3 C C3 OLB . . . J 4 -17.206 5.671 116.577 1 90.2 ? C3 OLB 1209 A 1 HETATM 4 C C4 OLB . . . J 4 -16.986 4.431 117.436 1 94.44 ? C4 OLB 1209 A 1 HETATM 5 C C5 OLB . . . J 4 -17.463 3.199 116.677 1 96.08 ? C5 OLB 1209 A 1 HETATM 6 O O19 OLB . . . J 4 -18.047 7.977 115.573 1 104.86 ? O19 OLB 1209 A 1 HETATM 7 O O20 OLB . . . J 4 -17.768 9.383 117.285 1 98.87 ? O20 OLB 1209 A 1 HETATM 8 C C21 OLB . . . J 4 -18.609 10.277 116.6 1 100.17 ? C21 OLB 1209 A 1 HETATM 9 C C22 OLB . . . J 4 -17.902 11.62 116.432 1 104.95 ? C22 OLB 1209 A 1 HETATM 10 O O23 OLB . . . J 4 -16.888 11.473 115.471 1 109.06 ? O23 OLB 1209 A 1 HETATM 11 C C24 OLB . . . J 4 -18.888 12.705 115.985 1 109.24 ? C24 OLB 1209 A 1 HETATM 12 O O25 OLB . . . J 4 -18.925 13.748 116.923 1 114.96 ? O25 OLB 1209 A 1 HETATM 13 C C6 OLB . . . J 4 -16.52 2.032 116.961 1 99.84 ? C6 OLB 1209 A 1 HETATM 14 C C7 OLB . . . J 4 -17.26 0.728 117.257 1 101.36 ? C7 OLB 1209 A 1 HETATM 15 C C8 OLB . . . J 4 -16.172 -0.314 117.496 1 113.26 ? C8 OLB 1209 A 1 HETATM 16 C C9 OLB . . . J 4 -16.725 -1.597 118.116 1 120.96 ? C9 OLB 1209 A 1 HETATM 17 C C10 OLB . . . J 4 -16.348 -2.751 117.596 1 119.93 ? C10 OLB 1209 A 1 HETATM 18 C C11 OLB . . . J 4 -16.862 -4.06 118.181 1 113.77 ? C11 OLB 1209 A 1 HETATM 19 C C12 OLB . . . J 4 -15.844 -4.516 119.224 1 115.2 ? C12 OLB 1209 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 19 #