data_6S1F # _model_server_result.job_id '_WsSRZtV4Y-mWez2phIq7Q' _model_server_result.datetime_utc '2024-10-18 16:26:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6s1f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":400}' # _entry.id 6S1F # _exptl.entry_id 6S1F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 453.557 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[3-[2-azanyl-5-(4-piperazin-1-ylphenyl)pyridin-3-yl]-5-methoxy-phenyl]methanesulfonamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6S1F _cell.length_a 124.343 _cell.length_b 124.343 _cell.length_c 228.676 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6S1F _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C23 H27 N5 O3 S' _chem_comp.formula_weight 453.557 _chem_comp.id KRE _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[3-[2-azanyl-5-(4-piperazin-1-ylphenyl)pyridin-3-yl]-5-methoxy-phenyl]methanesulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C29 N30 KRE sing 173 n n C29 C28 KRE sing 174 n n N30 C31 KRE sing 175 n n C28 N27 KRE sing 176 n n C31 C32 KRE sing 177 n n N27 C32 KRE sing 178 n n N27 C26 KRE sing 179 n n C25 C26 KRE doub 180 n y C25 C24 KRE sing 181 n y C26 C23 KRE sing 182 n y C24 C21 KRE doub 183 n y C23 C22 KRE doub 184 n y C21 C22 KRE sing 185 n y C21 C20 KRE sing 186 n n C19 C20 KRE doub 187 n y C19 N18 KRE sing 188 n y C20 C17 KRE sing 189 n y N18 C02 KRE doub 190 n y C17 C03 KRE doub 191 n y C02 C03 KRE sing 192 n y C02 N01 KRE sing 193 n n C03 C04 KRE sing 194 n n C04 C16 KRE doub 195 n y C04 C05 KRE sing 196 n y C16 C13 KRE sing 197 n y C05 C06 KRE doub 198 n y C13 O14 KRE sing 199 n n C13 C12 KRE doub 200 n y C06 C12 KRE sing 201 n y C06 N07 KRE sing 202 n n O14 C15 KRE sing 203 n n C10 S08 KRE sing 204 n n O09 S08 KRE doub 205 n n N07 S08 KRE sing 206 n n S08 O11 KRE doub 207 n n C15 H153 KRE sing 208 n n C15 H151 KRE sing 209 n n C15 H152 KRE sing 210 n n C19 H191 KRE sing 211 n n C12 H121 KRE sing 212 n n C16 H161 KRE sing 213 n n C17 H171 KRE sing 214 n n C05 H051 KRE sing 215 n n C10 H101 KRE sing 216 n n C10 H103 KRE sing 217 n n C10 H102 KRE sing 218 n n C22 H221 KRE sing 219 n n C23 H231 KRE sing 220 n n C24 H241 KRE sing 221 n n C25 H251 KRE sing 222 n n C28 H282 KRE sing 223 n n C28 H281 KRE sing 224 n n C29 H291 KRE sing 225 n n C29 H292 KRE sing 226 n n C31 H311 KRE sing 227 n n C31 H312 KRE sing 228 n n C32 H322 KRE sing 229 n n C32 H321 KRE sing 230 n n N01 H011 KRE sing 231 n n N01 H012 KRE sing 232 n n N07 H071 KRE sing 233 n n N30 H301 KRE sing 234 n n # _atom_sites.entry_id 6S1F _atom_sites.fract_transf_matrix[1][1] 0.008042 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008042 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004373 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 KRE A 1 400 400 KRE 7GC . F 2 KRE B 1 400 400 KRE 7GC . G 2 KRE C 1 400 400 KRE 7GC . H 2 KRE D 1 400 400 KRE 7GC . I 3 HOH A 1 501 23 HOH HOH . I 3 HOH A 2 502 3 HOH HOH . I 3 HOH A 3 503 29 HOH HOH . I 3 HOH A 4 504 26 HOH HOH . I 3 HOH A 5 505 5 HOH HOH . I 3 HOH A 6 506 28 HOH HOH . I 3 HOH A 7 507 2 HOH HOH . I 3 HOH A 8 508 25 HOH HOH . I 3 HOH A 9 509 7 HOH HOH . I 3 HOH A 10 510 38 HOH HOH . I 3 HOH A 11 511 27 HOH HOH . I 3 HOH A 12 512 48 HOH HOH . I 3 HOH A 13 513 4 HOH HOH . I 3 HOH A 14 514 24 HOH HOH . I 3 HOH A 15 515 6 HOH HOH . J 3 HOH B 1 501 16 HOH HOH . J 3 HOH B 2 502 13 HOH HOH . J 3 HOH B 3 503 9 HOH HOH . J 3 HOH B 4 504 11 HOH HOH . J 3 HOH B 5 505 12 HOH HOH . J 3 HOH B 6 506 8 HOH HOH . J 3 HOH B 7 507 10 HOH HOH . J 3 HOH B 8 508 17 HOH HOH . J 3 HOH B 9 509 14 HOH HOH . J 3 HOH B 10 510 15 HOH HOH . K 3 HOH C 1 501 43 HOH HOH . K 3 HOH C 2 502 19 HOH HOH . K 3 HOH C 3 503 33 HOH HOH . K 3 HOH C 4 504 44 HOH HOH . K 3 HOH C 5 505 41 HOH HOH . K 3 HOH C 6 506 42 HOH HOH . K 3 HOH C 7 507 32 HOH HOH . K 3 HOH C 8 508 31 HOH HOH . K 3 HOH C 9 509 35 HOH HOH . K 3 HOH C 10 510 18 HOH HOH . L 3 HOH D 1 501 36 HOH HOH . L 3 HOH D 2 502 37 HOH HOH . L 3 HOH D 3 503 46 HOH HOH . L 3 HOH D 4 504 21 HOH HOH . L 3 HOH D 5 505 22 HOH HOH . L 3 HOH D 6 506 47 HOH HOH . L 3 HOH D 7 507 20 HOH HOH . L 3 HOH D 8 508 39 HOH HOH . L 3 HOH D 9 509 45 HOH HOH . L 3 HOH D 10 510 40 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C15 KRE . . . E 2 -9.999 33.219 -28.807 1 31.09 ? C15 KRE 400 A 1 HETATM 2 C C19 KRE . . . E 2 -11.976 36.67 -36.146 1 33.66 ? C19 KRE 400 A 1 HETATM 3 O O11 KRE . . . E 2 -7.121 38.199 -27.7 1 44.3 ? O11 KRE 400 A 1 HETATM 4 C C12 KRE . . . E 2 -9.086 35.84 -29.808 1 41.59 ? C12 KRE 400 A 1 HETATM 5 C C13 KRE . . . E 2 -9.482 34.715 -30.538 1 35.87 ? C13 KRE 400 A 1 HETATM 6 C C16 KRE . . . E 2 -10.029 34.869 -31.81 1 35.13 ? C16 KRE 400 A 1 HETATM 7 C C17 KRE . . . E 2 -10.117 37.108 -34.712 1 32.9 ? C17 KRE 400 A 1 HETATM 8 C C02 KRE . . . E 2 -12.017 35.822 -34.03 1 27 ? C02 KRE 400 A 1 HETATM 9 C C03 KRE . . . E 2 -10.781 36.369 -33.75 1 30.41 ? C03 KRE 400 A 1 HETATM 10 C C04 KRE . . . E 2 -10.177 36.15 -32.347 1 35.52 ? C04 KRE 400 A 1 HETATM 11 C C05 KRE . . . E 2 -9.787 37.263 -31.631 1 51.32 ? C05 KRE 400 A 1 HETATM 12 C C06 KRE . . . E 2 -9.246 37.114 -30.359 1 44.99 ? C06 KRE 400 A 1 HETATM 13 C C10 KRE . . . E 2 -6.533 40.013 -29.675 1 74.6 ? C10 KRE 400 A 1 HETATM 14 C C20 KRE . . . E 2 -10.736 37.262 -35.942 1 35.23 ? C20 KRE 400 A 1 HETATM 15 C C21 KRE . . . E 2 -10.04 38.07 -37.035 1 43.84 ? C21 KRE 400 A 1 HETATM 16 C C22 KRE . . . E 2 -9.031 38.946 -36.654 1 58.34 ? C22 KRE 400 A 1 HETATM 17 C C23 KRE . . . E 2 -8.364 39.699 -37.61 1 59.16 ? C23 KRE 400 A 1 HETATM 18 C C24 KRE . . . E 2 -10.392 37.945 -38.365 1 45.6 ? C24 KRE 400 A 1 HETATM 19 C C25 KRE . . . E 2 -9.727 38.695 -39.325 1 49.93 ? C25 KRE 400 A 1 HETATM 20 C C26 KRE . . . E 2 -8.712 39.573 -38.94 1 54.72 ? C26 KRE 400 A 1 HETATM 21 C C28 KRE . . . E 2 -8.719 41.172 -40.967 1 61.81 ? C28 KRE 400 A 1 HETATM 22 C C29 KRE . . . E 2 -7.812 41.504 -42.152 1 74.54 ? C29 KRE 400 A 1 HETATM 23 C C31 KRE . . . E 2 -5.898 41.485 -40.757 1 78.17 ? C31 KRE 400 A 1 HETATM 24 C C32 KRE . . . E 2 -6.77 41.136 -39.549 1 65.73 ? C32 KRE 400 A 1 HETATM 25 N N01 KRE . . . E 2 -12.696 35.059 -33 1 27.04 ? N01 KRE 400 A 1 HETATM 26 N N07 KRE . . . E 2 -8.845 38.307 -29.632 1 45.81 ? N07 KRE 400 A 1 HETATM 27 N N18 KRE . . . E 2 -12.574 35.977 -35.2 1 32.18 ? N18 KRE 400 A 1 HETATM 28 N N27 KRE . . . E 2 -7.992 40.372 -39.941 1 63.03 ? N27 KRE 400 A 1 HETATM 29 N N30 KRE . . . E 2 -6.619 42.171 -41.76 1 92.44 ? N30 KRE 400 A 1 HETATM 30 O O09 KRE . . . E 2 -6.499 37.264 -29.635 1 63.4 ? O09 KRE 400 A 1 HETATM 31 O O14 KRE . . . E 2 -9.344 33.412 -30.029 1 32.13 ? O14 KRE 400 A 1 HETATM 32 S S08 KRE . . . E 2 -7.232 38.43 -29.134 1 85.08 ? S08 KRE 400 A 1 HETATM 33 H H153 KRE . . . E 2 -9.675 32.404 -28.392 1 2.18 ? H153 KRE 400 A 1 HETATM 34 H H151 KRE . . . E 2 -10.954 33.147 -28.96 1 2.18 ? H151 KRE 400 A 1 HETATM 35 H H152 KRE . . . E 2 -9.821 33.972 -28.223 1 2.18 ? H152 KRE 400 A 1 HETATM 36 H H191 KRE . . . E 2 -12.395 36.766 -36.971 1 5.27 ? H191 KRE 400 A 1 HETATM 37 H H121 KRE . . . E 2 -8.719 35.741 -28.959 1 14.78 ? H121 KRE 400 A 1 HETATM 38 H H161 KRE . . . E 2 -10.293 34.123 -32.299 1 7.03 ? H161 KRE 400 A 1 HETATM 39 H H171 KRE . . . E 2 -9.286 37.488 -34.539 1 4.36 ? H171 KRE 400 A 1 HETATM 40 H H051 KRE . . . E 2 -9.886 38.111 -31.999 1 26.46 ? H051 KRE 400 A 1 HETATM 41 H H101 KRE . . . E 2 -6.561 40.065 -30.643 1 54.4 ? H101 KRE 400 A 1 HETATM 42 H H103 KRE . . . E 2 -5.613 40.08 -29.374 1 54.4 ? H103 KRE 400 A 1 HETATM 43 H H102 KRE . . . E 2 -7.05 40.741 -29.297 1 54.4 ? H102 KRE 400 A 1 HETATM 44 H H221 KRE . . . E 2 -8.803 39.028 -35.757 1 34.88 ? H221 KRE 400 A 1 HETATM 45 H H231 KRE . . . E 2 -7.687 40.284 -37.356 1 35.87 ? H231 KRE 400 A 1 HETATM 46 H H241 KRE . . . E 2 -11.07 37.361 -38.616 1 19.59 ? H241 KRE 400 A 1 HETATM 47 H H251 KRE . . . E 2 -9.957 38.613 -40.222 1 24.79 ? H251 KRE 400 A 1 HETATM 48 H H282 KRE . . . E 2 -9.482 40.664 -41.284 1 39.05 ? H282 KRE 400 A 1 HETATM 49 H H281 KRE . . . E 2 -9.03 41.998 -40.565 1 39.05 ? H281 KRE 400 A 1 HETATM 50 H H291 KRE . . . E 2 -7.574 40.678 -42.602 1 54.32 ? H291 KRE 400 A 1 HETATM 51 H H292 KRE . . . E 2 -8.3 42.073 -42.767 1 54.32 ? H292 KRE 400 A 1 HETATM 52 H H311 KRE . . . E 2 -5.163 42.044 -40.462 1 58.69 ? H311 KRE 400 A 1 HETATM 53 H H312 KRE . . . E 2 -5.543 40.664 -41.134 1 58.69 ? H312 KRE 400 A 1 HETATM 54 H H322 KRE . . . E 2 -7.04 41.957 -39.109 1 43.76 ? H322 KRE 400 A 1 HETATM 55 H H321 KRE . . . E 2 -6.249 40.6 -38.931 1 43.76 ? H321 KRE 400 A 1 HETATM 56 H H011 KRE . . . E 2 -13.044 34.297 -33.19 1 27.32 ? H011 KRE 400 A 1 HETATM 57 H H012 KRE . . . E 2 -12.749 35.37 -32.2 1 27.32 ? H012 KRE 400 A 1 HETATM 58 H H071 KRE . . . E 2 -9.41 38.932 -29.459 1 19.85 ? H071 KRE 400 A 1 HETATM 59 H H301 KRE . . . E 2 -6.823 42.987 -41.467 1 75.81 ? H301 KRE 400 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 59 #