data_6S24 # _model_server_result.job_id UHX44orG4KJ-FGUJE2buwA _model_server_result.datetime_utc '2024-11-16 07:57:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6s24 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":706}' # _entry.id 6S24 # _exptl.entry_id 6S24 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 16 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6S24 _cell.length_a 50.655 _cell.length_b 104.661 _cell.length_c 143.186 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6S24 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 R N N ? 4 W N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 95 A CYS 95 1_555 A SG CYS 179 A CYS 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 A SG CYS 171 A CYS 171 1_555 A SG CYS 408 A CYS 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf3 A SG CYS 399 A CYS 399 1_555 A SG CYS 480 A CYS 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 A SG CYS 515 A CYS 515 1_555 A SG CYS 533 A CYS 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? disulf ? disulf5 A SG CYS 559 A CYS 559 1_555 A SG CYS 572 A CYS 572 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? disulf ? disulf6 A SG CYS 603 A CYS 603 1_555 A SG CYS 616 A CYS 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? covale ? covale1 A ND2 ASN 482 A ASN 482 1_555 U C1 NAG . A NAG 719 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale2 B OG1 THR 2 F THR 3 1_555 V C1 NGA . F NGA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? metalc ? metalc1 A OD2 ASP 275 A ASP 275 1_555 T MN MN . A MN 718 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc2 A NE2 HIS 277 A HIS 277 1_555 T MN MN . A MN 718 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc3 A NE2 HIS 413 A HIS 413 1_555 T MN MN . A MN 718 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc4 S O2A UDP . A UDP 717 1_555 T MN MN . A MN 718 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc5 S O3B UDP . A UDP 717 1_555 T MN MN . A MN 718 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc6 T MN MN . A MN 718 1_555 X O HOH . A HOH 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 320 n n P O2 PO4 sing 321 n n P O3 PO4 sing 322 n n P O4 PO4 sing 323 n n # _atom_sites.entry_id 6S24 _atom_sites.fract_transf_matrix[1][1] 0.019741 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009555 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006984 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 TAM A 1 701 1 TAM TAM . D 4 PO4 A 1 702 2 PO4 PO4 . E 4 PO4 A 1 703 3 PO4 PO4 . F 4 PO4 A 1 704 4 PO4 PO4 . G 4 PO4 A 1 705 5 PO4 PO4 . H 4 PO4 A 1 706 6 PO4 PO4 . I 4 PO4 A 1 707 7 PO4 PO4 . J 4 PO4 A 1 708 9 PO4 PO4 . K 4 PO4 A 1 709 10 PO4 PO4 . L 4 PO4 A 1 710 11 PO4 PO4 . M 4 PO4 A 1 711 12 PO4 PO4 . N 4 PO4 A 1 712 13 PO4 PO4 . O 4 PO4 A 1 713 14 PO4 PO4 . P 4 PO4 A 1 714 15 PO4 PO4 . Q 4 PO4 A 1 715 16 PO4 PO4 . R 4 PO4 A 1 716 17 PO4 PO4 . S 5 UDP A 1 717 1570 UDP UDP . T 6 MN A 1 718 1572 MN MN . U 7 NAG A 1 719 636 NAG NAG . V 8 NGA F 1 101 2 NGA NGA . W 4 PO4 F 1 102 1 PO4 PO4 . X 9 HOH A 1 801 275 HOH HOH . X 9 HOH A 2 802 81 HOH HOH . X 9 HOH A 3 803 157 HOH HOH . X 9 HOH A 4 804 76 HOH HOH . X 9 HOH A 5 805 46 HOH HOH . X 9 HOH A 6 806 177 HOH HOH . X 9 HOH A 7 807 251 HOH HOH . X 9 HOH A 8 808 266 HOH HOH . X 9 HOH A 9 809 155 HOH HOH . X 9 HOH A 10 810 77 HOH HOH . X 9 HOH A 11 811 95 HOH HOH . X 9 HOH A 12 812 15 HOH HOH . X 9 HOH A 13 813 310 HOH HOH . X 9 HOH A 14 814 94 HOH HOH . X 9 HOH A 15 815 37 HOH HOH . X 9 HOH A 16 816 150 HOH HOH . X 9 HOH A 17 817 257 HOH HOH . X 9 HOH A 18 818 49 HOH HOH . X 9 HOH A 19 819 74 HOH HOH . X 9 HOH A 20 820 194 HOH HOH . X 9 HOH A 21 821 195 HOH HOH . X 9 HOH A 22 822 44 HOH HOH . X 9 HOH A 23 823 114 HOH HOH . X 9 HOH A 24 824 243 HOH HOH . X 9 HOH A 25 825 65 HOH HOH . X 9 HOH A 26 826 3 HOH HOH . X 9 HOH A 27 827 43 HOH HOH . X 9 HOH A 28 828 198 HOH HOH . X 9 HOH A 29 829 131 HOH HOH . X 9 HOH A 30 830 271 HOH HOH . X 9 HOH A 31 831 39 HOH HOH . X 9 HOH A 32 832 31 HOH HOH . X 9 HOH A 33 833 59 HOH HOH . X 9 HOH A 34 834 72 HOH HOH . X 9 HOH A 35 835 68 HOH HOH . X 9 HOH A 36 836 29 HOH HOH . X 9 HOH A 37 837 218 HOH HOH . X 9 HOH A 38 838 142 HOH HOH . X 9 HOH A 39 839 17 HOH HOH . X 9 HOH A 40 840 62 HOH HOH . X 9 HOH A 41 841 47 HOH HOH . X 9 HOH A 42 842 5 HOH HOH . X 9 HOH A 43 843 12 HOH HOH . X 9 HOH A 44 844 34 HOH HOH . X 9 HOH A 45 845 156 HOH HOH . X 9 HOH A 46 846 45 HOH HOH . X 9 HOH A 47 847 269 HOH HOH . X 9 HOH A 48 848 282 HOH HOH . X 9 HOH A 49 849 126 HOH HOH . X 9 HOH A 50 850 283 HOH HOH . X 9 HOH A 51 851 169 HOH HOH . X 9 HOH A 52 852 148 HOH HOH . X 9 HOH A 53 853 238 HOH HOH . X 9 HOH A 54 854 304 HOH HOH . X 9 HOH A 55 855 158 HOH HOH . X 9 HOH A 56 856 242 HOH HOH . X 9 HOH A 57 857 161 HOH HOH . X 9 HOH A 58 858 300 HOH HOH . X 9 HOH A 59 859 260 HOH HOH . X 9 HOH A 60 860 138 HOH HOH . X 9 HOH A 61 861 52 HOH HOH . X 9 HOH A 62 862 50 HOH HOH . X 9 HOH A 63 863 231 HOH HOH . X 9 HOH A 64 864 6 HOH HOH . X 9 HOH A 65 865 132 HOH HOH . X 9 HOH A 66 866 80 HOH HOH . X 9 HOH A 67 867 25 HOH HOH . X 9 HOH A 68 868 63 HOH HOH . X 9 HOH A 69 869 1 HOH HOH . X 9 HOH A 70 870 23 HOH HOH . X 9 HOH A 71 871 20 HOH HOH . X 9 HOH A 72 872 22 HOH HOH . X 9 HOH A 73 873 118 HOH HOH . X 9 HOH A 74 874 97 HOH HOH . X 9 HOH A 75 875 88 HOH HOH . X 9 HOH A 76 876 206 HOH HOH . X 9 HOH A 77 877 54 HOH HOH . X 9 HOH A 78 878 60 HOH HOH . X 9 HOH A 79 879 30 HOH HOH . X 9 HOH A 80 880 115 HOH HOH . X 9 HOH A 81 881 48 HOH HOH . X 9 HOH A 82 882 298 HOH HOH . X 9 HOH A 83 883 11 HOH HOH . X 9 HOH A 84 884 102 HOH HOH . X 9 HOH A 85 885 13 HOH HOH . X 9 HOH A 86 886 99 HOH HOH . X 9 HOH A 87 887 21 HOH HOH . X 9 HOH A 88 888 41 HOH HOH . X 9 HOH A 89 889 4 HOH HOH . X 9 HOH A 90 890 92 HOH HOH . X 9 HOH A 91 891 18 HOH HOH . X 9 HOH A 92 892 7 HOH HOH . X 9 HOH A 93 893 237 HOH HOH . X 9 HOH A 94 894 28 HOH HOH . X 9 HOH A 95 895 302 HOH HOH . X 9 HOH A 96 896 186 HOH HOH . X 9 HOH A 97 897 51 HOH HOH . X 9 HOH A 98 898 66 HOH HOH . X 9 HOH A 99 899 24 HOH HOH . X 9 HOH A 100 900 112 HOH HOH . X 9 HOH A 101 901 57 HOH HOH . X 9 HOH A 102 902 139 HOH HOH . X 9 HOH A 103 903 36 HOH HOH . X 9 HOH A 104 904 40 HOH HOH . X 9 HOH A 105 905 179 HOH HOH . X 9 HOH A 106 906 32 HOH HOH . X 9 HOH A 107 907 270 HOH HOH . X 9 HOH A 108 908 149 HOH HOH . X 9 HOH A 109 909 33 HOH HOH . X 9 HOH A 110 910 110 HOH HOH . X 9 HOH A 111 911 261 HOH HOH . X 9 HOH A 112 912 291 HOH HOH . X 9 HOH A 113 913 71 HOH HOH . X 9 HOH A 114 914 272 HOH HOH . X 9 HOH A 115 915 70 HOH HOH . X 9 HOH A 116 916 124 HOH HOH . X 9 HOH A 117 917 56 HOH HOH . X 9 HOH A 118 918 61 HOH HOH . X 9 HOH A 119 919 104 HOH HOH . X 9 HOH A 120 920 208 HOH HOH . X 9 HOH A 121 921 199 HOH HOH . X 9 HOH A 122 922 281 HOH HOH . X 9 HOH A 123 923 285 HOH HOH . X 9 HOH A 124 924 69 HOH HOH . X 9 HOH A 125 925 136 HOH HOH . X 9 HOH A 126 926 53 HOH HOH . X 9 HOH A 127 927 171 HOH HOH . X 9 HOH A 128 928 19 HOH HOH . X 9 HOH A 129 929 212 HOH HOH . X 9 HOH A 130 930 133 HOH HOH . X 9 HOH A 131 931 228 HOH HOH . X 9 HOH A 132 932 288 HOH HOH . X 9 HOH A 133 933 35 HOH HOH . X 9 HOH A 134 934 100 HOH HOH . X 9 HOH A 135 935 160 HOH HOH . X 9 HOH A 136 936 236 HOH HOH . X 9 HOH A 137 937 252 HOH HOH . X 9 HOH A 138 938 295 HOH HOH . X 9 HOH A 139 939 16 HOH HOH . X 9 HOH A 140 940 182 HOH HOH . X 9 HOH A 141 941 306 HOH HOH . X 9 HOH A 142 942 309 HOH HOH . X 9 HOH A 143 943 262 HOH HOH . X 9 HOH A 144 944 58 HOH HOH . X 9 HOH A 145 945 305 HOH HOH . X 9 HOH A 146 946 253 HOH HOH . X 9 HOH A 147 947 239 HOH HOH . X 9 HOH A 148 948 79 HOH HOH . X 9 HOH A 149 949 85 HOH HOH . X 9 HOH A 150 950 286 HOH HOH . X 9 HOH A 151 951 122 HOH HOH . X 9 HOH A 152 952 26 HOH HOH . X 9 HOH A 153 953 290 HOH HOH . X 9 HOH A 154 954 86 HOH HOH . X 9 HOH A 155 955 263 HOH HOH . X 9 HOH A 156 956 297 HOH HOH . X 9 HOH A 157 957 146 HOH HOH . X 9 HOH A 158 958 267 HOH HOH . X 9 HOH A 159 959 234 HOH HOH . X 9 HOH A 160 960 226 HOH HOH . X 9 HOH A 161 961 303 HOH HOH . X 9 HOH A 162 962 197 HOH HOH . X 9 HOH A 163 963 307 HOH HOH . X 9 HOH A 164 964 232 HOH HOH . X 9 HOH A 165 965 250 HOH HOH . X 9 HOH A 166 966 256 HOH HOH . X 9 HOH A 167 967 292 HOH HOH . X 9 HOH A 168 968 249 HOH HOH . X 9 HOH A 169 969 227 HOH HOH . X 9 HOH A 170 970 255 HOH HOH . X 9 HOH A 171 971 308 HOH HOH . X 9 HOH A 172 972 9 HOH HOH . X 9 HOH A 173 973 293 HOH HOH . X 9 HOH A 174 974 240 HOH HOH . X 9 HOH A 175 975 147 HOH HOH . X 9 HOH A 176 976 289 HOH HOH . X 9 HOH A 177 977 273 HOH HOH . X 9 HOH A 178 978 264 HOH HOH . X 9 HOH A 179 979 301 HOH HOH . X 9 HOH A 180 980 296 HOH HOH . X 9 HOH A 181 981 224 HOH HOH . X 9 HOH A 182 982 259 HOH HOH . X 9 HOH A 183 983 101 HOH HOH . X 9 HOH A 184 984 294 HOH HOH . X 9 HOH A 185 985 258 HOH HOH . X 9 HOH A 186 986 225 HOH HOH . X 9 HOH A 187 987 154 HOH HOH . X 9 HOH A 188 988 190 HOH HOH . X 9 HOH A 189 989 233 HOH HOH . X 9 HOH A 190 990 265 HOH HOH . X 9 HOH A 191 991 254 HOH HOH . X 9 HOH A 192 992 268 HOH HOH . X 9 HOH A 193 993 229 HOH HOH . X 9 HOH A 194 994 277 HOH HOH . X 9 HOH A 195 995 244 HOH HOH . X 9 HOH A 196 996 274 HOH HOH . X 9 HOH A 197 997 299 HOH HOH . X 9 HOH A 198 998 235 HOH HOH . X 9 HOH A 199 999 276 HOH HOH . X 9 HOH A 200 1000 230 HOH HOH . Y 9 HOH F 1 201 163 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . H 4 -55.15 1.587 -31.3 1 65.5 ? P PO4 706 A 1 HETATM 2 O O1 PO4 . . . H 4 -55.138 1.86 -32.832 1 55.56 ? O1 PO4 706 A 1 HETATM 3 O O2 PO4 . . . H 4 -56.567 1.442 -30.778 1 61.2 ? O2 PO4 706 A 1 HETATM 4 O O3 PO4 . . . H 4 -54.412 0.29 -31.024 1 74.77 ? O3 PO4 706 A 1 HETATM 5 O O4 PO4 . . . H 4 -54.462 2.737 -30.588 1 62.17 ? O4 PO4 706 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #