data_6S2V
#
_model_server_result.job_id            oFuZc17kHB4VBY1Xns-bww 
_model_server_result.datetime_utc      '2025-03-12 04:35:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6s2v 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    6S2V 
#
_exptl.entry_id    6S2V 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6S2V 
_cell.length_a            105.737 
_cell.length_b            105.737 
_cell.length_c            241.455 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6S2V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,O 1 1 
B,F,G,H,P 2 1 
C,I,J,K,L,M,N,Q 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 F N N 
? 2 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 53 A HIS 52 1_555 D MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
metalc ? metalc2 A NE2 HIS 77 A HIS 76 1_555 D MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? 
metalc ? metalc3 A OD2 ASP 78 A ASP 77 1_555 D MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? 
metalc ? metalc4 A OD2 ASP 147 A ASP 146 1_555 D MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
metalc ? metalc5 B NE2 HIS 53 B HIS 52 1_555 F MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? 
metalc ? metalc6 B NE2 HIS 77 B HIS 76 1_555 F MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? 
metalc ? metalc7 B OD2 ASP 78 B ASP 77 1_555 F MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.782 ? 
metalc ? metalc8 B OD1 ASP 147 B ASP 146 1_555 F MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? 
metalc ? metalc9 B OD2 ASP 147 B ASP 146 1_555 F MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.772 ? 
metalc ? metalc10 C O ARG 25 C ARG 24 1_555 N NA NA . C NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.83 ? 
metalc ? metalc11 C NE2 HIS 53 C HIS 52 1_555 I MN MN . C MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? 
metalc ? metalc12 C NE2 HIS 77 C HIS 76 1_555 I MN MN . C MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? 
metalc ? metalc13 C OD2 ASP 78 C ASP 77 1_555 I MN MN . C MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? 
metalc ? metalc14 C OD1 ASP 147 C ASP 146 1_555 I MN MN . C MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6S2V 
_atom_sites.fract_transf_matrix[1][1]    0.009457 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009457 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004142 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 MN A 1 401 3 MN MN . 
E 3 CL A 1 402 2 CL CL . 
F 2 MN B 1 401 4 MN MN . 
G 4 PO4 B 1 402 1 PO4 PO4 . 
H 3 CL B 1 403 7 CL CL . 
I 2 MN C 1 401 1 MN MN . 
J 3 CL C 1 402 1 CL CL . 
K 3 CL C 1 403 3 CL CL . 
L 3 CL C 1 404 5 CL CL . 
M 3 CL C 1 405 6 CL CL . 
N 5 NA C 1 406 1 NA NA . 
O 6 HOH A 1 501 61 HOH HOH . 
O 6 HOH A 2 502 23 HOH HOH . 
O 6 HOH A 3 503 6 HOH HOH . 
O 6 HOH A 4 504 11 HOH HOH . 
O 6 HOH A 5 505 60 HOH HOH . 
O 6 HOH A 6 506 13 HOH HOH . 
O 6 HOH A 7 507 10 HOH HOH . 
O 6 HOH A 8 508 59 HOH HOH . 
O 6 HOH A 9 509 5 HOH HOH . 
O 6 HOH A 10 510 21 HOH HOH . 
O 6 HOH A 11 511 47 HOH HOH . 
O 6 HOH A 12 512 14 HOH HOH . 
O 6 HOH A 13 513 7 HOH HOH . 
O 6 HOH A 14 514 12 HOH HOH . 
O 6 HOH A 15 515 20 HOH HOH . 
O 6 HOH A 16 516 62 HOH HOH . 
O 6 HOH A 17 517 17 HOH HOH . 
O 6 HOH A 18 518 16 HOH HOH . 
O 6 HOH A 19 519 19 HOH HOH . 
O 6 HOH A 20 520 31 HOH HOH . 
O 6 HOH A 21 521 32 HOH HOH . 
O 6 HOH A 22 522 8 HOH HOH . 
O 6 HOH A 23 523 9 HOH HOH . 
O 6 HOH A 24 524 18 HOH HOH . 
O 6 HOH A 25 525 15 HOH HOH . 
O 6 HOH A 26 526 63 HOH HOH . 
O 6 HOH A 27 527 56 HOH HOH . 
P 6 HOH B 1 501 33 HOH HOH . 
P 6 HOH B 2 502 41 HOH HOH . 
P 6 HOH B 3 503 45 HOH HOH . 
P 6 HOH B 4 504 57 HOH HOH . 
P 6 HOH B 5 505 58 HOH HOH . 
P 6 HOH B 6 506 46 HOH HOH . 
P 6 HOH B 7 507 24 HOH HOH . 
P 6 HOH B 8 508 34 HOH HOH . 
P 6 HOH B 9 509 22 HOH HOH . 
P 6 HOH B 10 510 36 HOH HOH . 
P 6 HOH B 11 511 35 HOH HOH . 
Q 6 HOH C 1 501 64 HOH HOH . 
Q 6 HOH C 2 502 49 HOH HOH . 
Q 6 HOH C 3 503 40 HOH HOH . 
Q 6 HOH C 4 504 48 HOH HOH . 
Q 6 HOH C 5 505 28 HOH HOH . 
Q 6 HOH C 6 506 53 HOH HOH . 
Q 6 HOH C 7 507 4 HOH HOH . 
Q 6 HOH C 8 508 2 HOH HOH . 
Q 6 HOH C 9 509 3 HOH HOH . 
Q 6 HOH C 10 510 42 HOH HOH . 
Q 6 HOH C 11 511 51 HOH HOH . 
Q 6 HOH C 12 512 52 HOH HOH . 
Q 6 HOH C 13 513 38 HOH HOH . 
Q 6 HOH C 14 514 1 HOH HOH . 
Q 6 HOH C 15 515 26 HOH HOH . 
Q 6 HOH C 16 516 27 HOH HOH . 
Q 6 HOH C 17 517 55 HOH HOH . 
Q 6 HOH C 18 518 44 HOH HOH . 
Q 6 HOH C 19 519 37 HOH HOH . 
Q 6 HOH C 20 520 30 HOH HOH . 
Q 6 HOH C 21 521 25 HOH HOH . 
Q 6 HOH C 22 522 43 HOH HOH . 
Q 6 HOH C 23 523 39 HOH HOH . 
Q 6 HOH C 24 524 29 HOH HOH . 
Q 6 HOH C 25 525 54 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               17.802 
_atom_site.Cartn_y               27.081 
_atom_site.Cartn_z               -21.865 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        98.7 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              111 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           256 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#