data_6S38 # _model_server_result.job_id LOiymE_YrO5kEQJWpET4Bw _model_server_result.datetime_utc '2024-11-05 11:01:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6s38 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 6S38 # _exptl.entry_id 6S38 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.167 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1S,3R,4S,5R)-1,3,4,5-tetrahydroxycyclohexanecarboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6S38 _cell.length_a 44.563 _cell.length_b 67.394 _cell.length_c 96.7 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6S38 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C7 H12 O6' _chem_comp.formula_weight 192.167 _chem_comp.id QIC _chem_comp.mon_nstd_flag . _chem_comp.name '(1S,3R,4S,5R)-1,3,4,5-tetrahydroxycyclohexanecarboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Quinic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C7 C1 QIC sing 277 n n O1 C1 QIC sing 278 n n C1 C2 QIC sing 279 n n C1 C6 QIC sing 280 n n O1 HO1 QIC sing 281 n n C2 C3 QIC sing 282 n n C2 H2 QIC sing 283 n n C2 H2A QIC sing 284 n n O2 C3 QIC sing 285 n n O2 HO2 QIC sing 286 n n C3 C4 QIC sing 287 n n C3 H3 QIC sing 288 n n C4 O3 QIC sing 289 n n O3 HO3 QIC sing 290 n n C5 C4 QIC sing 291 n n C4 H4 QIC sing 292 n n C5 O4 QIC sing 293 n n O4 HO4 QIC sing 294 n n C6 C5 QIC sing 295 n n C5 H5 QIC sing 296 n n O5 C7 QIC doub 297 n n C6 H6 QIC sing 298 n n C6 H6A QIC sing 299 n n C7 O6 QIC sing 300 n n O6 HO6 QIC sing 301 n n # _atom_sites.entry_id 6S38 _atom_sites.fract_transf_matrix[1][1] 0.02244 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014838 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010341 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 QIC A 1 601 201 QIC QIC . D 2 QIC B 1 601 201 QIC QIC . E 3 HOH A 1 701 12 HOH HOH . E 3 HOH A 2 702 18 HOH HOH . E 3 HOH A 3 703 28 HOH HOH . E 3 HOH A 4 704 22 HOH HOH . E 3 HOH A 5 705 6 HOH HOH . E 3 HOH A 6 706 27 HOH HOH . E 3 HOH A 7 707 26 HOH HOH . E 3 HOH A 8 708 9 HOH HOH . E 3 HOH A 9 709 30 HOH HOH . E 3 HOH A 10 710 19 HOH HOH . E 3 HOH A 11 711 25 HOH HOH . F 3 HOH B 1 701 16 HOH HOH . F 3 HOH B 2 702 21 HOH HOH . F 3 HOH B 3 703 17 HOH HOH . F 3 HOH B 4 704 5 HOH HOH . F 3 HOH B 5 705 1 HOH HOH . F 3 HOH B 6 706 10 HOH HOH . F 3 HOH B 7 707 8 HOH HOH . F 3 HOH B 8 708 4 HOH HOH . F 3 HOH B 9 709 20 HOH HOH . F 3 HOH B 10 710 7 HOH HOH . F 3 HOH B 11 711 3 HOH HOH . F 3 HOH B 12 712 23 HOH HOH . F 3 HOH B 13 713 24 HOH HOH . F 3 HOH B 14 714 11 HOH HOH . F 3 HOH B 15 715 2 HOH HOH . F 3 HOH B 16 716 14 HOH HOH . F 3 HOH B 17 717 31 HOH HOH . F 3 HOH B 18 718 13 HOH HOH . F 3 HOH B 19 719 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 QIC . . . C 2 22.937 52.932 40.9 1 49.76 ? C1 QIC 601 A 1 HETATM 2 O O1 QIC . . . C 2 24.15 52.623 40.283 1 51.3 ? O1 QIC 601 A 1 HETATM 3 C C2 QIC . . . C 2 22.811 54.145 41.784 1 48.5 ? C2 QIC 601 A 1 HETATM 4 O O2 QIC . . . C 2 23.445 55.696 40.08 1 49.67 ? O2 QIC 601 A 1 HETATM 5 C C3 QIC . . . C 2 22.311 55.183 40.752 1 52.37 ? C3 QIC 601 A 1 HETATM 6 O O3 QIC . . . C 2 20.387 55.511 39.228 1 43.9 ? O3 QIC 601 A 1 HETATM 7 C C4 QIC . . . C 2 21.491 54.663 39.54 1 46.91 ? C4 QIC 601 A 1 HETATM 8 O O4 QIC . . . C 2 19.846 52.918 38.959 1 40.92 ? O4 QIC 601 A 1 HETATM 9 C C5 QIC . . . C 2 21.175 53.142 39.382 1 44.47 ? C5 QIC 601 A 1 HETATM 10 O O5 QIC . . . C 2 24.373 51.241 41.938 1 47.61 ? O5 QIC 601 A 1 HETATM 11 C C6 QIC . . . C 2 21.632 52.242 40.558 1 44.14 ? C6 QIC 601 A 1 HETATM 12 O O6 QIC . . . C 2 22.602 51.733 43.053 1 50.79 ? O6 QIC 601 A 1 HETATM 13 C C7 QIC . . . C 2 23.312 51.927 42.026 1 53.52 ? C7 QIC 601 A 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 13 #