data_6S3N # _model_server_result.job_id hM9kbsMdaIEJUdWtosxL9w _model_server_result.datetime_utc '2024-10-19 20:16:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6s3n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1002}' # _entry.id 6S3N # _exptl.entry_id 6S3N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6S3N _cell.length_a 88.093 _cell.length_b 102.955 _cell.length_c 249.697 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6S3N _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,K 1 1 B,D,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 35 A THR 98 1_555 F MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc2 E O2B ADP . A ADP 1001 1_555 F MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc3 F MG MG . A MG 1002 1_555 G O4 VO4 . A VO4 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc4 F MG MG . A MG 1002 1_555 K O HOH . A HOH 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc5 F MG MG . A MG 1002 1_555 K O HOH . A HOH 1108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc6 F MG MG . A MG 1002 1_555 K O HOH . A HOH 1109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc7 B OG1 THR 35 B THR 98 1_555 I MG MG . B MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc8 H O3B ADP . B ADP 1001 1_555 I MG MG . B MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? metalc ? metalc9 I MG MG . B MG 1002 1_555 J O4 VO4 . B VO4 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc10 I MG MG . B MG 1002 1_555 L O HOH . B HOH 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.82 ? metalc ? metalc11 I MG MG . B MG 1002 1_555 L O HOH . B HOH 1107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.723 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6S3N _atom_sites.fract_transf_matrix[1][1] 0.011352 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009713 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004005 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 ADP A 1 1001 1001 ADP ADP . F 5 MG A 1 1002 1002 MG MG . G 6 VO4 A 1 1003 1101 VO4 VO4 . H 4 ADP B 1 1001 1001 ADP ADP . I 5 MG B 1 1002 1002 MG MG . J 6 VO4 B 1 1003 1003 VO4 VO4 . K 7 HOH A 1 1101 10 HOH HOH . K 7 HOH A 2 1102 19 HOH HOH . K 7 HOH A 3 1103 12 HOH HOH . K 7 HOH A 4 1104 25 HOH HOH . K 7 HOH A 5 1105 21 HOH HOH . K 7 HOH A 6 1106 27 HOH HOH . K 7 HOH A 7 1107 18 HOH HOH . K 7 HOH A 8 1108 23 HOH HOH . K 7 HOH A 9 1109 26 HOH HOH . K 7 HOH A 10 1110 7 HOH HOH . K 7 HOH A 11 1111 22 HOH HOH . K 7 HOH A 12 1112 14 HOH HOH . K 7 HOH A 13 1113 3 HOH HOH . K 7 HOH A 14 1114 1 HOH HOH . K 7 HOH A 15 1115 5 HOH HOH . K 7 HOH A 16 1116 32 HOH HOH . K 7 HOH A 17 1117 2 HOH HOH . K 7 HOH A 18 1118 11 HOH HOH . K 7 HOH A 19 1119 9 HOH HOH . K 7 HOH A 20 1120 13 HOH HOH . K 7 HOH A 21 1121 17 HOH HOH . K 7 HOH A 22 1122 29 HOH HOH . K 7 HOH A 23 1123 28 HOH HOH . K 7 HOH A 24 1124 31 HOH HOH . L 7 HOH B 1 1101 33 HOH HOH . L 7 HOH B 2 1102 20 HOH HOH . L 7 HOH B 3 1103 15 HOH HOH . L 7 HOH B 4 1104 4 HOH HOH . L 7 HOH B 5 1105 34 HOH HOH . L 7 HOH B 6 1106 6 HOH HOH . L 7 HOH B 7 1107 35 HOH HOH . L 7 HOH B 8 1108 8 HOH HOH . L 7 HOH B 9 1109 24 HOH HOH . L 7 HOH B 10 1110 30 HOH HOH . L 7 HOH B 11 1111 16 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 5 _atom_site.Cartn_x 47.755 _atom_site.Cartn_y -23.144 _atom_site.Cartn_z -6.904 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 95.33 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1002 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #