data_6S3Q
#
_model_server_result.job_id            ETJFcBQdrLOd9YnDNBzjHw 
_model_server_result.datetime_utc      '2025-04-01 13:56:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6s3q 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":503}' 
#
_entry.id    6S3Q 
#
_exptl.entry_id    6S3Q 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6S3Q 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6S3Q 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 M N N 
? 3 T N N 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 563 n n 
CBA CAB Y01 sing 564 n n 
CBA CAN Y01 sing 565 n n 
CAN CAJ Y01 sing 566 n n 
CAJ CAO Y01 sing 567 n n 
CAO CBB Y01 sing 568 n n 
CBB CAC Y01 sing 569 n n 
CBB CBE Y01 sing 570 n n 
CBE CAP Y01 sing 571 n n 
CBE CBI Y01 sing 572 n n 
CAP CAQ Y01 sing 573 n n 
CAQ CBG Y01 sing 574 n n 
CBG CBI Y01 sing 575 n n 
CBG CBD Y01 sing 576 n n 
CBI CAE Y01 sing 577 n n 
CBI CAU Y01 sing 578 n n 
CAU CAS Y01 sing 579 n n 
CAS CBF Y01 sing 580 n n 
CBF CBD Y01 sing 581 n n 
CBF CBH Y01 sing 582 n n 
CBD CAK Y01 sing 583 n n 
CAK CAI Y01 sing 584 n n 
CAI CAZ Y01 doub 585 n n 
CAZ CAV Y01 sing 586 n n 
CAZ CBH Y01 sing 587 n n 
CAV CBC Y01 sing 588 n n 
CBH CAD Y01 sing 589 n n 
CBH CAT Y01 sing 590 n n 
CAT CAR Y01 sing 591 n n 
CAR CBC Y01 sing 592 n n 
CBC OAW Y01 sing 593 n n 
OAW CAY Y01 sing 594 n n 
CAY OAG Y01 doub 595 n n 
CAY CAM Y01 sing 596 n n 
CAM CAL Y01 sing 597 n n 
CAL CAX Y01 sing 598 n n 
CAX OAH Y01 sing 599 n n 
CAX OAF Y01 doub 600 n n 
CAA HAA1 Y01 sing 601 n n 
CAA HAA2 Y01 sing 602 n n 
CAA HAA3 Y01 sing 603 n n 
CBA HBA Y01 sing 604 n n 
CAB HAB1 Y01 sing 605 n n 
CAB HAB2 Y01 sing 606 n n 
CAB HAB3 Y01 sing 607 n n 
CAN HAN1 Y01 sing 608 n n 
CAN HAN2 Y01 sing 609 n n 
CAJ HAJ1 Y01 sing 610 n n 
CAJ HAJ2 Y01 sing 611 n n 
CAO HAO1 Y01 sing 612 n n 
CAO HAO2 Y01 sing 613 n n 
CBB HBB Y01 sing 614 n n 
CAC HAC1 Y01 sing 615 n n 
CAC HAC2 Y01 sing 616 n n 
CAC HAC3 Y01 sing 617 n n 
CBE HBE Y01 sing 618 n n 
CAP HAP1 Y01 sing 619 n n 
CAP HAP2 Y01 sing 620 n n 
CAQ HAQ1 Y01 sing 621 n n 
CAQ HAQ2 Y01 sing 622 n n 
CBG HBG Y01 sing 623 n n 
CBD HBD Y01 sing 624 n n 
CAE HAE1 Y01 sing 625 n n 
CAE HAE2 Y01 sing 626 n n 
CAE HAE3 Y01 sing 627 n n 
CAU HAU1 Y01 sing 628 n n 
CAU HAU2 Y01 sing 629 n n 
CAS HAS1 Y01 sing 630 n n 
CAS HAS2 Y01 sing 631 n n 
CBF HBF Y01 sing 632 n n 
CAK HAK1 Y01 sing 633 n n 
CAK HAK2 Y01 sing 634 n n 
CAI HAI Y01 sing 635 n n 
CAV HAV1 Y01 sing 636 n n 
CAV HAV2 Y01 sing 637 n n 
CBC HBC Y01 sing 638 n n 
CAD HAD1 Y01 sing 639 n n 
CAD HAD2 Y01 sing 640 n n 
CAD HAD3 Y01 sing 641 n n 
CAT HAT1 Y01 sing 642 n n 
CAT HAT2 Y01 sing 643 n n 
CAR HAR1 Y01 sing 644 n n 
CAR HAR2 Y01 sing 645 n n 
CAM HAM1 Y01 sing 646 n n 
CAM HAM2 Y01 sing 647 n n 
CAL HAL1 Y01 sing 648 n n 
CAL HAL2 Y01 sing 649 n n 
OAH HAH Y01 sing 650 n n 
#
_atom_sites.entry_id                     6S3Q 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 7O9 A 1 601 601 7O9 7O9 . 
E 3 Y01 A 1 602 610 Y01 Y01 . 
F 4 PC1 A 1 603 611 PC1 PC1 . 
G 4 PC1 A 1 604 612 PC1 PC1 . 
H 4 PC1 A 1 605 613 PC1 PC1 . 
I 4 PC1 A 1 606 615 PC1 PC1 . 
J 4 PC1 A 1 607 614 PC1 PC1 . 
K 4 PC1 B 1 501 614 PC1 PC1 . 
L 2 7O9 B 1 502 601 7O9 7O9 . 
M 3 Y01 B 1 503 610 Y01 Y01 . 
N 4 PC1 B 1 504 611 PC1 PC1 . 
O 4 PC1 B 1 505 612 PC1 PC1 . 
P 4 PC1 B 1 506 613 PC1 PC1 . 
Q 4 PC1 B 1 507 615 PC1 PC1 . 
R 4 PC1 C 1 501 614 PC1 PC1 . 
S 2 7O9 C 1 502 601 7O9 7O9 . 
T 3 Y01 C 1 503 610 Y01 Y01 . 
U 4 PC1 C 1 504 611 PC1 PC1 . 
V 4 PC1 C 1 505 612 PC1 PC1 . 
W 4 PC1 C 1 506 613 PC1 PC1 . 
X 4 PC1 C 1 507 615 PC1 PC1 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . M 3 144.125 81.728 103.496 1 64 ? CAA Y01 503 B 1 
HETATM 2 C CBA Y01 . . . M 3 143.382 83.05 103.552 1 64 ? CBA Y01 503 B 1 
HETATM 3 C CAB Y01 . . . M 3 143.527 83.671 104.929 1 64 ? CAB Y01 503 B 1 
HETATM 4 C CAN Y01 . . . M 3 141.914 82.877 103.18 1 64 ? CAN Y01 503 B 1 
HETATM 5 C CAJ Y01 . . . M 3 141.656 82.072 101.933 1 64 ? CAJ Y01 503 B 1 
HETATM 6 C CAO Y01 . . . M 3 140.254 82.216 101.4 1 64 ? CAO Y01 503 B 1 
HETATM 7 C CBB Y01 . . . M 3 139.908 81.253 100.256 1 64 ? CBB Y01 503 B 1 
HETATM 8 C CAC Y01 . . . M 3 139.755 79.844 100.822 1 64 ? CAC Y01 503 B 1 
HETATM 9 C CBE Y01 . . . M 3 138.692 81.764 99.451 1 64 ? CBE Y01 503 B 1 
HETATM 10 C CAP Y01 . . . M 3 138.787 83.286 99.142 1 64 ? CAP Y01 503 B 1 
HETATM 11 C CAQ Y01 . . . M 3 138.424 83.465 97.659 1 64 ? CAQ Y01 503 B 1 
HETATM 12 C CBG Y01 . . . M 3 137.527 82.262 97.419 1 64 ? CBG Y01 503 B 1 
HETATM 13 C CBI Y01 . . . M 3 138.31 81.111 98.082 1 64 ? CBI Y01 503 B 1 
HETATM 14 C CAE Y01 . . . M 3 139.582 80.771 97.285 1 64 ? CAE Y01 503 B 1 
HETATM 15 C CAU Y01 . . . M 3 137.353 79.914 98.136 1 64 ? CAU Y01 503 B 1 
HETATM 16 C CAS Y01 . . . M 3 136.791 79.553 96.757 1 64 ? CAS Y01 503 B 1 
HETATM 17 C CBF Y01 . . . M 3 136.098 80.742 96.074 1 64 ? CBF Y01 503 B 1 
HETATM 18 C CBD Y01 . . . M 3 137.034 81.962 96.009 1 64 ? CBD Y01 503 B 1 
HETATM 19 C CAK Y01 . . . M 3 136.307 83.168 95.425 1 64 ? CAK Y01 503 B 1 
HETATM 20 C CAI Y01 . . . M 3 135.441 82.822 94.257 1 64 ? CAI Y01 503 B 1 
HETATM 21 C CAZ Y01 . . . M 3 135.027 81.603 93.947 1 64 ? CAZ Y01 503 B 1 
HETATM 22 C CAV Y01 . . . M 3 134.071 81.388 92.792 1 64 ? CAV Y01 503 B 1 
HETATM 23 C CBH Y01 . . . M 3 135.45 80.355 94.715 1 64 ? CBH Y01 503 B 1 
HETATM 24 C CAD Y01 . . . M 3 136.414 79.556 93.82 1 64 ? CAD Y01 503 B 1 
HETATM 25 C CAT Y01 . . . M 3 134.194 79.508 95.022 1 64 ? CAT Y01 503 B 1 
HETATM 26 C CAR Y01 . . . M 3 133.27 79.289 93.825 1 64 ? CAR Y01 503 B 1 
HETATM 27 C CBC Y01 . . . M 3 132.852 80.603 93.225 1 64 ? CBC Y01 503 B 1 
HETATM 28 O OAW Y01 . . . M 3 131.92 80.42 92.107 1 64 ? OAW Y01 503 B 1 
HETATM 29 C CAY Y01 . . . M 3 132.134 79.519 91.132 1 64 ? CAY Y01 503 B 1 
HETATM 30 O OAG Y01 . . . M 3 133.197 79.244 90.651 1 64 ? OAG Y01 503 B 1 
HETATM 31 C CAM Y01 . . . M 3 130.855 78.869 90.703 1 64 ? CAM Y01 503 B 1 
HETATM 32 C CAL Y01 . . . M 3 129.78 79.769 90.148 1 64 ? CAL Y01 503 B 1 
HETATM 33 C CAX Y01 . . . M 3 128.633 79.018 89.499 1 64 ? CAX Y01 503 B 1 
HETATM 34 O OAH Y01 . . . M 3 127.526 79.025 90.068 1 64 ? OAH Y01 503 B 1 
HETATM 35 O OAF Y01 . . . M 3 128.851 78.43 88.422 1 64 ? OAF Y01 503 B 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           446 
_model_server_stats.encode_time_ms          14 
_model_server_stats.element_count           35 
#