data_6S3Q # _model_server_result.job_id ODEL0HheZ3yt84fxS7Ling _model_server_result.datetime_utc '2025-04-01 05:00:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6s3q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":504}' # _entry.id 6S3Q # _exptl.entry_id 6S3Q _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 790.145 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE _entity.pdbx_number_of_molecules 15 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6S3Q _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6S3Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 R N N ? 4 U N N ? 4 V N N ? 4 W N N ? 4 X N N # _chem_comp.formula 'C44 H88 N O8 P' _chem_comp.formula_weight 790.145 _chem_comp.id PC1 _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 3-SN-PHOSPHATIDYLCHOLINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O12 P PC1 sing 283 n n P O14 PC1 doub 284 n n P O13 PC1 sing 285 n n P O11 PC1 sing 286 n n O13 C11 PC1 sing 287 n n C11 C12 PC1 sing 288 n n C11 H111 PC1 sing 289 n n C11 H112 PC1 sing 290 n n C12 N PC1 sing 291 n n C12 H121 PC1 sing 292 n n C12 H122 PC1 sing 293 n n N C13 PC1 sing 294 n n N C14 PC1 sing 295 n n N C15 PC1 sing 296 n n C13 H131 PC1 sing 297 n n C13 H132 PC1 sing 298 n n C13 H133 PC1 sing 299 n n C14 H141 PC1 sing 300 n n C14 H142 PC1 sing 301 n n C14 H143 PC1 sing 302 n n C15 H151 PC1 sing 303 n n C15 H152 PC1 sing 304 n n C15 H153 PC1 sing 305 n n O11 C1 PC1 sing 306 n n C1 C2 PC1 sing 307 n n C1 H11 PC1 sing 308 n n C1 H12 PC1 sing 309 n n C2 O21 PC1 sing 310 n n C2 C3 PC1 sing 311 n n C2 H2 PC1 sing 312 n n O21 C21 PC1 sing 313 n n C21 O22 PC1 doub 314 n n C21 C22 PC1 sing 315 n n C22 C23 PC1 sing 316 n n C22 H221 PC1 sing 317 n n C22 H222 PC1 sing 318 n n C23 C24 PC1 sing 319 n n C23 H231 PC1 sing 320 n n C23 H232 PC1 sing 321 n n C24 C25 PC1 sing 322 n n C24 H241 PC1 sing 323 n n C24 H242 PC1 sing 324 n n C25 C26 PC1 sing 325 n n C25 H251 PC1 sing 326 n n C25 H252 PC1 sing 327 n n C26 C27 PC1 sing 328 n n C26 H261 PC1 sing 329 n n C26 H262 PC1 sing 330 n n C27 C28 PC1 sing 331 n n C27 H271 PC1 sing 332 n n C27 H272 PC1 sing 333 n n C28 C29 PC1 sing 334 n n C28 H281 PC1 sing 335 n n C28 H282 PC1 sing 336 n n C29 C2A PC1 sing 337 n n C29 H291 PC1 sing 338 n n C29 H292 PC1 sing 339 n n C2A C2B PC1 sing 340 n n C2A H2A1 PC1 sing 341 n n C2A H2A2 PC1 sing 342 n n C2B C2C PC1 sing 343 n n C2B H2B1 PC1 sing 344 n n C2B H2B2 PC1 sing 345 n n C2C C2D PC1 sing 346 n n C2C H2C1 PC1 sing 347 n n C2C H2C2 PC1 sing 348 n n C2D C2E PC1 sing 349 n n C2D H2D1 PC1 sing 350 n n C2D H2D2 PC1 sing 351 n n C2E C2F PC1 sing 352 n n C2E H2E1 PC1 sing 353 n n C2E H2E2 PC1 sing 354 n n C2F C2G PC1 sing 355 n n C2F H2F1 PC1 sing 356 n n C2F H2F2 PC1 sing 357 n n C2G C2H PC1 sing 358 n n C2G H2G1 PC1 sing 359 n n C2G H2G2 PC1 sing 360 n n C2H C2I PC1 sing 361 n n C2H H2H1 PC1 sing 362 n n C2H H2H2 PC1 sing 363 n n C2I H2I1 PC1 sing 364 n n C2I H2I2 PC1 sing 365 n n C2I H2I3 PC1 sing 366 n n C3 O31 PC1 sing 367 n n C3 H31 PC1 sing 368 n n C3 H32 PC1 sing 369 n n O31 C31 PC1 sing 370 n n C31 O32 PC1 doub 371 n n C31 C32 PC1 sing 372 n n C32 C33 PC1 sing 373 n n C32 H321 PC1 sing 374 n n C32 H322 PC1 sing 375 n n C33 C34 PC1 sing 376 n n C33 H331 PC1 sing 377 n n C33 H332 PC1 sing 378 n n C34 C35 PC1 sing 379 n n C34 H341 PC1 sing 380 n n C34 H342 PC1 sing 381 n n C35 C36 PC1 sing 382 n n C35 H351 PC1 sing 383 n n C35 H352 PC1 sing 384 n n C36 C37 PC1 sing 385 n n C36 H361 PC1 sing 386 n n C36 H362 PC1 sing 387 n n C37 C38 PC1 sing 388 n n C37 H371 PC1 sing 389 n n C37 H372 PC1 sing 390 n n C38 C39 PC1 sing 391 n n C38 H381 PC1 sing 392 n n C38 H382 PC1 sing 393 n n C39 C3A PC1 sing 394 n n C39 H391 PC1 sing 395 n n C39 H392 PC1 sing 396 n n C3A C3B PC1 sing 397 n n C3A H3A1 PC1 sing 398 n n C3A H3A2 PC1 sing 399 n n C3B C3C PC1 sing 400 n n C3B H3B1 PC1 sing 401 n n C3B H3B2 PC1 sing 402 n n C3C C3D PC1 sing 403 n n C3C H3C1 PC1 sing 404 n n C3C H3C2 PC1 sing 405 n n C3D C3E PC1 sing 406 n n C3D H3D1 PC1 sing 407 n n C3D H3D2 PC1 sing 408 n n C3E C3F PC1 sing 409 n n C3E H3E1 PC1 sing 410 n n C3E H3E2 PC1 sing 411 n n C3F C3G PC1 sing 412 n n C3F H3F1 PC1 sing 413 n n C3F H3F2 PC1 sing 414 n n C3G C3H PC1 sing 415 n n C3G H3G1 PC1 sing 416 n n C3G H3G2 PC1 sing 417 n n C3H C3I PC1 sing 418 n n C3H H3H1 PC1 sing 419 n n C3H H3H2 PC1 sing 420 n n C3I H3I1 PC1 sing 421 n n C3I H3I2 PC1 sing 422 n n C3I H3I3 PC1 sing 423 n n # _atom_sites.entry_id 6S3Q _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 7O9 A 1 601 601 7O9 7O9 . E 3 Y01 A 1 602 610 Y01 Y01 . F 4 PC1 A 1 603 611 PC1 PC1 . G 4 PC1 A 1 604 612 PC1 PC1 . H 4 PC1 A 1 605 613 PC1 PC1 . I 4 PC1 A 1 606 615 PC1 PC1 . J 4 PC1 A 1 607 614 PC1 PC1 . K 4 PC1 B 1 501 614 PC1 PC1 . L 2 7O9 B 1 502 601 7O9 7O9 . M 3 Y01 B 1 503 610 Y01 Y01 . N 4 PC1 B 1 504 611 PC1 PC1 . O 4 PC1 B 1 505 612 PC1 PC1 . P 4 PC1 B 1 506 613 PC1 PC1 . Q 4 PC1 B 1 507 615 PC1 PC1 . R 4 PC1 C 1 501 614 PC1 PC1 . S 2 7O9 C 1 502 601 7O9 7O9 . T 3 Y01 C 1 503 610 Y01 Y01 . U 4 PC1 C 1 504 611 PC1 PC1 . V 4 PC1 C 1 505 612 PC1 PC1 . W 4 PC1 C 1 506 613 PC1 PC1 . X 4 PC1 C 1 507 615 PC1 PC1 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O12 PC1 . . . U 4 82.058 107.111 87.091 1 56.69 ? O12 PC1 504 C 1 HETATM 2 P P PC1 . . . U 4 82.755 107.657 88.274 1 56.69 ? P PC1 504 C 1 HETATM 3 O O14 PC1 . . . U 4 84.006 108.424 88.074 1 56.69 ? O14 PC1 504 C 1 HETATM 4 O O13 PC1 . . . U 4 81.703 108.541 89.083 1 56.69 ? O13 PC1 504 C 1 HETATM 5 O O11 PC1 . . . U 4 83.043 106.435 89.255 1 56.69 ? O11 PC1 504 C 1 HETATM 6 C C1 PC1 . . . U 4 83.928 106.591 90.382 1 56.69 ? C1 PC1 504 C 1 HETATM 7 C C2 PC1 . . . U 4 83.366 105.859 91.571 1 56.69 ? C2 PC1 504 C 1 HETATM 8 O O21 PC1 . . . U 4 84.401 104.962 92.077 1 56.69 ? O21 PC1 504 C 1 HETATM 9 C C21 PC1 . . . U 4 84.683 105.058 93.379 1 56.69 ? C21 PC1 504 C 1 HETATM 10 O O22 PC1 . . . U 4 84.057 105.736 94.143 1 56.69 ? O22 PC1 504 C 1 HETATM 11 C C22 PC1 . . . U 4 85.885 104.245 93.742 1 56.69 ? C22 PC1 504 C 1 HETATM 12 C C23 PC1 . . . U 4 85.633 103.239 94.852 1 56.69 ? C23 PC1 504 C 1 HETATM 13 C C24 PC1 . . . U 4 85.593 103.827 96.25 1 56.69 ? C24 PC1 504 C 1 HETATM 14 C C25 PC1 . . . U 4 85.21 102.789 97.279 1 56.69 ? C25 PC1 504 C 1 HETATM 15 C C26 PC1 . . . U 4 85.086 103.281 98.703 1 56.69 ? C26 PC1 504 C 1 HETATM 16 C C27 PC1 . . . U 4 84.725 102.158 99.661 1 56.69 ? C27 PC1 504 C 1 HETATM 17 C C28 PC1 . . . U 4 84.537 102.577 101.104 1 56.69 ? C28 PC1 504 C 1 HETATM 18 C C29 PC1 . . . U 4 84.141 101.429 102.016 1 56.69 ? C29 PC1 504 C 1 HETATM 19 C C2A PC1 . . . U 4 83.913 101.84 103.459 1 56.69 ? C2A PC1 504 C 1 HETATM 20 C C2B PC1 . . . U 4 83.351 100.736 104.338 1 56.69 ? C2B PC1 504 C 1 HETATM 21 C C3 PC1 . . . U 4 82.13 105.062 91.248 1 56.69 ? C3 PC1 504 C 1 HETATM 22 O O31 PC1 . . . U 4 81.487 104.623 92.469 1 56.69 ? O31 PC1 504 C 1 HETATM 23 C C31 PC1 . . . U 4 80.529 105.401 92.983 1 56.69 ? C31 PC1 504 C 1 HETATM 24 O O32 PC1 . . . U 4 80.23 106.475 92.54 1 56.69 ? O32 PC1 504 C 1 HETATM 25 C C32 PC1 . . . U 4 79.87 104.76 94.166 1 56.69 ? C32 PC1 504 C 1 HETATM 26 C C33 PC1 . . . U 4 80.652 104.902 95.466 1 56.69 ? C33 PC1 504 C 1 HETATM 27 C C34 PC1 . . . U 4 81.208 103.581 95.989 1 56.69 ? C34 PC1 504 C 1 HETATM 28 C C35 PC1 . . . U 4 80.567 103.082 97.277 1 56.69 ? C35 PC1 504 C 1 HETATM 29 C C36 PC1 . . . U 4 79.085 102.791 97.154 1 56.69 ? C36 PC1 504 C 1 HETATM 30 C C37 PC1 . . . U 4 78.499 101.968 98.279 1 56.69 ? C37 PC1 504 C 1 HETATM 31 C C38 PC1 . . . U 4 78.254 102.73 99.559 1 56.69 ? C38 PC1 504 C 1 HETATM 32 C C39 PC1 . . . U 4 77.575 101.898 100.636 1 56.69 ? C39 PC1 504 C 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 32 #