data_6S4B
#
_model_server_result.job_id            fvQneRxErtjGQ2iwQjH-zQ 
_model_server_result.datetime_utc      '2024-10-19 03:39:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6s4b 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    6S4B 
#
_exptl.entry_id    6S4B 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              90.121 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (R,R)-2,3-BUTANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6S4B 
_cell.length_a            41.238 
_cell.length_b            46.748 
_cell.length_c            57.08 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6S4B 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASN 20 A ASN 61 1_555 D CA CA . A CA 303 3_645 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? 
metalc ? metalc2 A OE1 GLN 23 A GLN 64 1_555 D CA CA . A CA 303 3_645 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? 
metalc ? metalc3 A O TYR 96 A TYR 137 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc4 A O ASN 99 A ASN 140 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? 
metalc ? metalc5 D CA CA . A CA 303 1_555 E O HOH . A HOH 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.01 ? 
metalc ? metalc6 D CA CA . A CA 303 1_555 E O HOH . A HOH 466 3_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? 
#
_chem_comp.formula           'C4 H10 O2' 
_chem_comp.formula_weight    90.121 
_chem_comp.id                BU3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (R,R)-2,3-BUTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O6 C3 BU3 sing 70 n n 
O6 HO6 BU3 sing 71 n n 
C3 C4 BU3 sing 72 n n 
C3 C2 BU3 sing 73 n n 
C3 H3 BU3 sing 74 n n 
C4 H41 BU3 sing 75 n n 
C4 H42 BU3 sing 76 n n 
C4 H43 BU3 sing 77 n n 
C2 O5 BU3 sing 78 n n 
C2 C1 BU3 sing 79 n n 
C2 H2 BU3 sing 80 n n 
O5 HO5 BU3 sing 81 n n 
C1 H11 BU3 sing 82 n n 
C1 H12 BU3 sing 83 n n 
C1 H13 BU3 sing 84 n n 
#
_atom_sites.entry_id                     6S4B 
_atom_sites.fract_transf_matrix[1][1]    0.024249 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021391 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017519 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 BU3 A 1 301 301 BU3 BU3 . 
C 3 KUH A 1 302 401 KUH BX1 . 
D 4 CA A 1 303 1 CA CA . 
E 5 HOH A 1 401 67 HOH HOH . 
E 5 HOH A 2 402 86 HOH HOH . 
E 5 HOH A 3 403 23 HOH HOH . 
E 5 HOH A 4 404 79 HOH HOH . 
E 5 HOH A 5 405 106 HOH HOH . 
E 5 HOH A 6 406 88 HOH HOH . 
E 5 HOH A 7 407 97 HOH HOH . 
E 5 HOH A 8 408 76 HOH HOH . 
E 5 HOH A 9 409 14 HOH HOH . 
E 5 HOH A 10 410 90 HOH HOH . 
E 5 HOH A 11 411 111 HOH HOH . 
E 5 HOH A 12 412 80 HOH HOH . 
E 5 HOH A 13 413 51 HOH HOH . 
E 5 HOH A 14 414 18 HOH HOH . 
E 5 HOH A 15 415 50 HOH HOH . 
E 5 HOH A 16 416 54 HOH HOH . 
E 5 HOH A 17 417 73 HOH HOH . 
E 5 HOH A 18 418 56 HOH HOH . 
E 5 HOH A 19 419 82 HOH HOH . 
E 5 HOH A 20 420 1 HOH HOH . 
E 5 HOH A 21 421 20 HOH HOH . 
E 5 HOH A 22 422 103 HOH HOH . 
E 5 HOH A 23 423 62 HOH HOH . 
E 5 HOH A 24 424 26 HOH HOH . 
E 5 HOH A 25 425 29 HOH HOH . 
E 5 HOH A 26 426 3 HOH HOH . 
E 5 HOH A 27 427 8 HOH HOH . 
E 5 HOH A 28 428 70 HOH HOH . 
E 5 HOH A 29 429 66 HOH HOH . 
E 5 HOH A 30 430 84 HOH HOH . 
E 5 HOH A 31 431 47 HOH HOH . 
E 5 HOH A 32 432 114 HOH HOH . 
E 5 HOH A 33 433 87 HOH HOH . 
E 5 HOH A 34 434 9 HOH HOH . 
E 5 HOH A 35 435 43 HOH HOH . 
E 5 HOH A 36 436 13 HOH HOH . 
E 5 HOH A 37 437 65 HOH HOH . 
E 5 HOH A 38 438 11 HOH HOH . 
E 5 HOH A 39 439 45 HOH HOH . 
E 5 HOH A 40 440 33 HOH HOH . 
E 5 HOH A 41 441 37 HOH HOH . 
E 5 HOH A 42 442 63 HOH HOH . 
E 5 HOH A 43 443 6 HOH HOH . 
E 5 HOH A 44 444 100 HOH HOH . 
E 5 HOH A 45 445 35 HOH HOH . 
E 5 HOH A 46 446 12 HOH HOH . 
E 5 HOH A 47 447 77 HOH HOH . 
E 5 HOH A 48 448 16 HOH HOH . 
E 5 HOH A 49 449 2 HOH HOH . 
E 5 HOH A 50 450 48 HOH HOH . 
E 5 HOH A 51 451 49 HOH HOH . 
E 5 HOH A 52 452 81 HOH HOH . 
E 5 HOH A 53 453 25 HOH HOH . 
E 5 HOH A 54 454 28 HOH HOH . 
E 5 HOH A 55 455 44 HOH HOH . 
E 5 HOH A 56 456 55 HOH HOH . 
E 5 HOH A 57 457 24 HOH HOH . 
E 5 HOH A 58 458 112 HOH HOH . 
E 5 HOH A 59 459 60 HOH HOH . 
E 5 HOH A 60 460 5 HOH HOH . 
E 5 HOH A 61 461 89 HOH HOH . 
E 5 HOH A 62 462 74 HOH HOH . 
E 5 HOH A 63 463 7 HOH HOH . 
E 5 HOH A 64 464 64 HOH HOH . 
E 5 HOH A 65 465 17 HOH HOH . 
E 5 HOH A 66 466 59 HOH HOH . 
E 5 HOH A 67 467 22 HOH HOH . 
E 5 HOH A 68 468 58 HOH HOH . 
E 5 HOH A 69 469 52 HOH HOH . 
E 5 HOH A 70 470 78 HOH HOH . 
E 5 HOH A 71 471 99 HOH HOH . 
E 5 HOH A 72 472 4 HOH HOH . 
E 5 HOH A 73 473 91 HOH HOH . 
E 5 HOH A 74 474 57 HOH HOH . 
E 5 HOH A 75 475 21 HOH HOH . 
E 5 HOH A 76 476 30 HOH HOH . 
E 5 HOH A 77 477 93 HOH HOH . 
E 5 HOH A 78 478 107 HOH HOH . 
E 5 HOH A 79 479 46 HOH HOH . 
E 5 HOH A 80 480 41 HOH HOH . 
E 5 HOH A 81 481 72 HOH HOH . 
E 5 HOH A 82 482 83 HOH HOH . 
E 5 HOH A 83 483 110 HOH HOH . 
E 5 HOH A 84 484 95 HOH HOH . 
E 5 HOH A 85 485 32 HOH HOH . 
E 5 HOH A 86 486 15 HOH HOH . 
E 5 HOH A 87 487 31 HOH HOH . 
E 5 HOH A 88 488 116 HOH HOH . 
E 5 HOH A 89 489 38 HOH HOH . 
E 5 HOH A 90 490 10 HOH HOH . 
E 5 HOH A 91 491 105 HOH HOH . 
E 5 HOH A 92 492 42 HOH HOH . 
E 5 HOH A 93 493 69 HOH HOH . 
E 5 HOH A 94 494 109 HOH HOH . 
E 5 HOH A 95 495 19 HOH HOH . 
E 5 HOH A 96 496 102 HOH HOH . 
E 5 HOH A 97 497 98 HOH HOH . 
E 5 HOH A 98 498 85 HOH HOH . 
E 5 HOH A 99 499 36 HOH HOH . 
E 5 HOH A 100 500 75 HOH HOH . 
E 5 HOH A 101 501 108 HOH HOH . 
E 5 HOH A 102 502 53 HOH HOH . 
E 5 HOH A 103 503 34 HOH HOH . 
E 5 HOH A 104 504 68 HOH HOH . 
E 5 HOH A 105 505 96 HOH HOH . 
E 5 HOH A 106 506 71 HOH HOH . 
E 5 HOH A 107 507 113 HOH HOH . 
E 5 HOH A 108 508 92 HOH HOH . 
E 5 HOH A 109 509 94 HOH HOH . 
E 5 HOH A 110 510 101 HOH HOH . 
E 5 HOH A 111 511 40 HOH HOH . 
E 5 HOH A 112 512 104 HOH HOH . 
E 5 HOH A 113 513 39 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O6 BU3 . . . B 2 6.932 7.957 28.767 1 64.65 ? O6 BU3 301 A 1 
HETATM 2 C C3 BU3 . . . B 2 6.77 7.286 27.517 1 56.01 ? C3 BU3 301 A 1 
HETATM 3 C C4 BU3 . . . B 2 8.066 6.618 27.111 1 52.08 ? C4 BU3 301 A 1 
HETATM 4 C C2 BU3 . . . B 2 6.429 8.391 26.503 1 50.6 ? C2 BU3 301 A 1 
HETATM 5 O O5 BU3 . . . B 2 5.388 9.226 27.013 1 70.29 ? O5 BU3 301 A 1 
HETATM 6 C C1 BU3 . . . B 2 6.039 7.795 25.166 1 44.24 ? C1 BU3 301 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           329 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#