data_6S4B # _model_server_result.job_id '_ddIdq83GMwG8N7owFSGhQ' _model_server_result.datetime_utc '2024-10-19 03:49:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6s4b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 6S4B # _exptl.entry_id 6S4B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6S4B _cell.length_a 41.238 _cell.length_b 46.748 _cell.length_c 57.08 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6S4B _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 20 A ASN 61 1_555 D CA CA . A CA 303 3_645 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc2 A OE1 GLN 23 A GLN 64 1_555 D CA CA . A CA 303 3_645 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc3 A O TYR 96 A TYR 137 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc4 A O ASN 99 A ASN 140 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc5 D CA CA . A CA 303 1_555 E O HOH . A HOH 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.01 ? metalc ? metalc6 D CA CA . A CA 303 1_555 E O HOH . A HOH 466 3_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6S4B _atom_sites.fract_transf_matrix[1][1] 0.024249 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021391 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017519 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BU3 A 1 301 301 BU3 BU3 . C 3 KUH A 1 302 401 KUH BX1 . D 4 CA A 1 303 1 CA CA . E 5 HOH A 1 401 67 HOH HOH . E 5 HOH A 2 402 86 HOH HOH . E 5 HOH A 3 403 23 HOH HOH . E 5 HOH A 4 404 79 HOH HOH . E 5 HOH A 5 405 106 HOH HOH . E 5 HOH A 6 406 88 HOH HOH . E 5 HOH A 7 407 97 HOH HOH . E 5 HOH A 8 408 76 HOH HOH . E 5 HOH A 9 409 14 HOH HOH . E 5 HOH A 10 410 90 HOH HOH . E 5 HOH A 11 411 111 HOH HOH . E 5 HOH A 12 412 80 HOH HOH . E 5 HOH A 13 413 51 HOH HOH . E 5 HOH A 14 414 18 HOH HOH . E 5 HOH A 15 415 50 HOH HOH . E 5 HOH A 16 416 54 HOH HOH . E 5 HOH A 17 417 73 HOH HOH . E 5 HOH A 18 418 56 HOH HOH . E 5 HOH A 19 419 82 HOH HOH . E 5 HOH A 20 420 1 HOH HOH . E 5 HOH A 21 421 20 HOH HOH . E 5 HOH A 22 422 103 HOH HOH . E 5 HOH A 23 423 62 HOH HOH . E 5 HOH A 24 424 26 HOH HOH . E 5 HOH A 25 425 29 HOH HOH . E 5 HOH A 26 426 3 HOH HOH . E 5 HOH A 27 427 8 HOH HOH . E 5 HOH A 28 428 70 HOH HOH . E 5 HOH A 29 429 66 HOH HOH . E 5 HOH A 30 430 84 HOH HOH . E 5 HOH A 31 431 47 HOH HOH . E 5 HOH A 32 432 114 HOH HOH . E 5 HOH A 33 433 87 HOH HOH . E 5 HOH A 34 434 9 HOH HOH . E 5 HOH A 35 435 43 HOH HOH . E 5 HOH A 36 436 13 HOH HOH . E 5 HOH A 37 437 65 HOH HOH . E 5 HOH A 38 438 11 HOH HOH . E 5 HOH A 39 439 45 HOH HOH . E 5 HOH A 40 440 33 HOH HOH . E 5 HOH A 41 441 37 HOH HOH . E 5 HOH A 42 442 63 HOH HOH . E 5 HOH A 43 443 6 HOH HOH . E 5 HOH A 44 444 100 HOH HOH . E 5 HOH A 45 445 35 HOH HOH . E 5 HOH A 46 446 12 HOH HOH . E 5 HOH A 47 447 77 HOH HOH . E 5 HOH A 48 448 16 HOH HOH . E 5 HOH A 49 449 2 HOH HOH . E 5 HOH A 50 450 48 HOH HOH . E 5 HOH A 51 451 49 HOH HOH . E 5 HOH A 52 452 81 HOH HOH . E 5 HOH A 53 453 25 HOH HOH . E 5 HOH A 54 454 28 HOH HOH . E 5 HOH A 55 455 44 HOH HOH . E 5 HOH A 56 456 55 HOH HOH . E 5 HOH A 57 457 24 HOH HOH . E 5 HOH A 58 458 112 HOH HOH . E 5 HOH A 59 459 60 HOH HOH . E 5 HOH A 60 460 5 HOH HOH . E 5 HOH A 61 461 89 HOH HOH . E 5 HOH A 62 462 74 HOH HOH . E 5 HOH A 63 463 7 HOH HOH . E 5 HOH A 64 464 64 HOH HOH . E 5 HOH A 65 465 17 HOH HOH . E 5 HOH A 66 466 59 HOH HOH . E 5 HOH A 67 467 22 HOH HOH . E 5 HOH A 68 468 58 HOH HOH . E 5 HOH A 69 469 52 HOH HOH . E 5 HOH A 70 470 78 HOH HOH . E 5 HOH A 71 471 99 HOH HOH . E 5 HOH A 72 472 4 HOH HOH . E 5 HOH A 73 473 91 HOH HOH . E 5 HOH A 74 474 57 HOH HOH . E 5 HOH A 75 475 21 HOH HOH . E 5 HOH A 76 476 30 HOH HOH . E 5 HOH A 77 477 93 HOH HOH . E 5 HOH A 78 478 107 HOH HOH . E 5 HOH A 79 479 46 HOH HOH . E 5 HOH A 80 480 41 HOH HOH . E 5 HOH A 81 481 72 HOH HOH . E 5 HOH A 82 482 83 HOH HOH . E 5 HOH A 83 483 110 HOH HOH . E 5 HOH A 84 484 95 HOH HOH . E 5 HOH A 85 485 32 HOH HOH . E 5 HOH A 86 486 15 HOH HOH . E 5 HOH A 87 487 31 HOH HOH . E 5 HOH A 88 488 116 HOH HOH . E 5 HOH A 89 489 38 HOH HOH . E 5 HOH A 90 490 10 HOH HOH . E 5 HOH A 91 491 105 HOH HOH . E 5 HOH A 92 492 42 HOH HOH . E 5 HOH A 93 493 69 HOH HOH . E 5 HOH A 94 494 109 HOH HOH . E 5 HOH A 95 495 19 HOH HOH . E 5 HOH A 96 496 102 HOH HOH . E 5 HOH A 97 497 98 HOH HOH . E 5 HOH A 98 498 85 HOH HOH . E 5 HOH A 99 499 36 HOH HOH . E 5 HOH A 100 500 75 HOH HOH . E 5 HOH A 101 501 108 HOH HOH . E 5 HOH A 102 502 53 HOH HOH . E 5 HOH A 103 503 34 HOH HOH . E 5 HOH A 104 504 68 HOH HOH . E 5 HOH A 105 505 96 HOH HOH . E 5 HOH A 106 506 71 HOH HOH . E 5 HOH A 107 507 113 HOH HOH . E 5 HOH A 108 508 92 HOH HOH . E 5 HOH A 109 509 94 HOH HOH . E 5 HOH A 110 510 101 HOH HOH . E 5 HOH A 111 511 40 HOH HOH . E 5 HOH A 112 512 104 HOH HOH . E 5 HOH A 113 513 39 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 11.261 _atom_site.Cartn_y 20.997 _atom_site.Cartn_z 23.845 _atom_site.occupancy 0.4 _atom_site.B_iso_or_equiv 43.13 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 303 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #