data_6S4F
#
_model_server_result.job_id            hyHkUziS_bkoWgj8X4tFbQ 
_model_server_result.datetime_utc      '2024-11-06 22:48:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6s4f 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":405}' 
#
_entry.id    6S4F 
#
_exptl.entry_id    6S4F 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6S4F 
_cell.length_a            116.895 
_cell.length_b            116.895 
_cell.length_c            112.965 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6S4F 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 J N N 
? 5 O N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 173 n n 
C1 C2 GOL sing 174 n n 
C1 H11 GOL sing 175 n n 
C1 H12 GOL sing 176 n n 
O1 HO1 GOL sing 177 n n 
C2 O2 GOL sing 178 n n 
C2 C3 GOL sing 179 n n 
C2 H2 GOL sing 180 n n 
O2 HO2 GOL sing 181 n n 
C3 O3 GOL sing 182 n n 
C3 H31 GOL sing 183 n n 
C3 H32 GOL sing 184 n n 
O3 HO3 GOL sing 185 n n 
#
_atom_sites.entry_id                     6S4F 
_atom_sites.fract_transf_matrix[1][1]    0.008555 
_atom_sites.fract_transf_matrix[1][2]    0.004939 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009878 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008852 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 KUN A 1 401 2 KUN LIG . 
D 3 PO4 A 1 402 2 PO4 PO4 . 
E 3 PO4 A 1 403 3 PO4 PO4 . 
F 3 PO4 A 1 404 4 PO4 PO4 . 
G 3 PO4 A 1 405 7 PO4 PO4 . 
H 3 PO4 A 1 406 9 PO4 PO4 . 
I 4 ADP A 1 407 1 ADP ADP . 
J 5 GOL A 1 408 1 GOL GOL . 
K 2 KUN B 1 401 1 KUN LIG . 
L 3 PO4 B 1 402 5 PO4 PO4 . 
M 3 PO4 B 1 403 6 PO4 PO4 . 
N 3 PO4 B 1 404 8 PO4 PO4 . 
O 5 GOL B 1 405 2 GOL GOL . 
P 6 HOH A 1 501 6 HOH HOH . 
P 6 HOH A 2 502 38 HOH HOH . 
P 6 HOH A 3 503 79 HOH HOH . 
P 6 HOH A 4 504 77 HOH HOH . 
P 6 HOH A 5 505 58 HOH HOH . 
P 6 HOH A 6 506 34 HOH HOH . 
P 6 HOH A 7 507 24 HOH HOH . 
P 6 HOH A 8 508 69 HOH HOH . 
P 6 HOH A 9 509 10 HOH HOH . 
P 6 HOH A 10 510 28 HOH HOH . 
P 6 HOH A 11 511 20 HOH HOH . 
P 6 HOH A 12 512 129 HOH HOH . 
P 6 HOH A 13 513 19 HOH HOH . 
P 6 HOH A 14 514 124 HOH HOH . 
P 6 HOH A 15 515 122 HOH HOH . 
P 6 HOH A 16 516 135 HOH HOH . 
P 6 HOH A 17 517 162 HOH HOH . 
P 6 HOH A 18 518 133 HOH HOH . 
P 6 HOH A 19 519 53 HOH HOH . 
P 6 HOH A 20 520 130 HOH HOH . 
P 6 HOH A 21 521 18 HOH HOH . 
P 6 HOH A 22 522 22 HOH HOH . 
P 6 HOH A 23 523 107 HOH HOH . 
P 6 HOH A 24 524 16 HOH HOH . 
P 6 HOH A 25 525 42 HOH HOH . 
P 6 HOH A 26 526 105 HOH HOH . 
P 6 HOH A 27 527 131 HOH HOH . 
P 6 HOH A 28 528 123 HOH HOH . 
P 6 HOH A 29 529 27 HOH HOH . 
P 6 HOH A 30 530 7 HOH HOH . 
P 6 HOH A 31 531 17 HOH HOH . 
P 6 HOH A 32 532 47 HOH HOH . 
P 6 HOH A 33 533 5 HOH HOH . 
P 6 HOH A 34 534 102 HOH HOH . 
P 6 HOH A 35 535 147 HOH HOH . 
P 6 HOH A 36 536 45 HOH HOH . 
P 6 HOH A 37 537 91 HOH HOH . 
P 6 HOH A 38 538 13 HOH HOH . 
P 6 HOH A 39 539 90 HOH HOH . 
P 6 HOH A 40 540 8 HOH HOH . 
P 6 HOH A 41 541 80 HOH HOH . 
P 6 HOH A 42 542 60 HOH HOH . 
P 6 HOH A 43 543 43 HOH HOH . 
P 6 HOH A 44 544 125 HOH HOH . 
P 6 HOH A 45 545 108 HOH HOH . 
P 6 HOH A 46 546 142 HOH HOH . 
P 6 HOH A 47 547 96 HOH HOH . 
P 6 HOH A 48 548 136 HOH HOH . 
P 6 HOH A 49 549 71 HOH HOH . 
P 6 HOH A 50 550 85 HOH HOH . 
P 6 HOH A 51 551 138 HOH HOH . 
P 6 HOH A 52 552 82 HOH HOH . 
P 6 HOH A 53 553 132 HOH HOH . 
P 6 HOH A 54 554 145 HOH HOH . 
P 6 HOH A 55 555 83 HOH HOH . 
P 6 HOH A 56 556 35 HOH HOH . 
P 6 HOH A 57 557 59 HOH HOH . 
P 6 HOH A 58 558 140 HOH HOH . 
P 6 HOH A 59 559 106 HOH HOH . 
P 6 HOH A 60 560 139 HOH HOH . 
P 6 HOH A 61 561 87 HOH HOH . 
P 6 HOH A 62 562 50 HOH HOH . 
P 6 HOH A 63 563 21 HOH HOH . 
P 6 HOH A 64 564 81 HOH HOH . 
P 6 HOH A 65 565 36 HOH HOH . 
P 6 HOH A 66 566 93 HOH HOH . 
P 6 HOH A 67 567 23 HOH HOH . 
P 6 HOH A 68 568 103 HOH HOH . 
P 6 HOH A 69 569 52 HOH HOH . 
P 6 HOH A 70 570 134 HOH HOH . 
P 6 HOH A 71 571 48 HOH HOH . 
P 6 HOH A 72 572 149 HOH HOH . 
P 6 HOH A 73 573 141 HOH HOH . 
P 6 HOH A 74 574 86 HOH HOH . 
P 6 HOH A 75 575 150 HOH HOH . 
P 6 HOH A 76 576 39 HOH HOH . 
P 6 HOH A 77 577 37 HOH HOH . 
P 6 HOH A 78 578 114 HOH HOH . 
P 6 HOH A 79 579 143 HOH HOH . 
P 6 HOH A 80 580 46 HOH HOH . 
P 6 HOH A 81 581 92 HOH HOH . 
P 6 HOH A 82 582 137 HOH HOH . 
P 6 HOH A 83 583 84 HOH HOH . 
Q 6 HOH B 1 501 127 HOH HOH . 
Q 6 HOH B 2 502 119 HOH HOH . 
Q 6 HOH B 3 503 56 HOH HOH . 
Q 6 HOH B 4 504 65 HOH HOH . 
Q 6 HOH B 5 505 9 HOH HOH . 
Q 6 HOH B 6 506 75 HOH HOH . 
Q 6 HOH B 7 507 26 HOH HOH . 
Q 6 HOH B 8 508 70 HOH HOH . 
Q 6 HOH B 9 509 109 HOH HOH . 
Q 6 HOH B 10 510 76 HOH HOH . 
Q 6 HOH B 11 511 67 HOH HOH . 
Q 6 HOH B 12 512 51 HOH HOH . 
Q 6 HOH B 13 513 3 HOH HOH . 
Q 6 HOH B 14 514 11 HOH HOH . 
Q 6 HOH B 15 515 12 HOH HOH . 
Q 6 HOH B 16 516 66 HOH HOH . 
Q 6 HOH B 17 517 1 HOH HOH . 
Q 6 HOH B 18 518 73 HOH HOH . 
Q 6 HOH B 19 519 41 HOH HOH . 
Q 6 HOH B 20 520 155 HOH HOH . 
Q 6 HOH B 21 521 126 HOH HOH . 
Q 6 HOH B 22 522 57 HOH HOH . 
Q 6 HOH B 23 523 113 HOH HOH . 
Q 6 HOH B 24 524 89 HOH HOH . 
Q 6 HOH B 25 525 153 HOH HOH . 
Q 6 HOH B 26 526 55 HOH HOH . 
Q 6 HOH B 27 527 121 HOH HOH . 
Q 6 HOH B 28 528 148 HOH HOH . 
Q 6 HOH B 29 529 68 HOH HOH . 
Q 6 HOH B 30 530 2 HOH HOH . 
Q 6 HOH B 31 531 4 HOH HOH . 
Q 6 HOH B 32 532 25 HOH HOH . 
Q 6 HOH B 33 533 40 HOH HOH . 
Q 6 HOH B 34 534 44 HOH HOH . 
Q 6 HOH B 35 535 62 HOH HOH . 
Q 6 HOH B 36 536 29 HOH HOH . 
Q 6 HOH B 37 537 152 HOH HOH . 
Q 6 HOH B 38 538 63 HOH HOH . 
Q 6 HOH B 39 539 128 HOH HOH . 
Q 6 HOH B 40 540 104 HOH HOH . 
Q 6 HOH B 41 541 156 HOH HOH . 
Q 6 HOH B 42 542 159 HOH HOH . 
Q 6 HOH B 43 543 120 HOH HOH . 
Q 6 HOH B 44 544 158 HOH HOH . 
Q 6 HOH B 45 545 101 HOH HOH . 
Q 6 HOH B 46 546 30 HOH HOH . 
Q 6 HOH B 47 547 33 HOH HOH . 
Q 6 HOH B 48 548 72 HOH HOH . 
Q 6 HOH B 49 549 98 HOH HOH . 
Q 6 HOH B 50 550 151 HOH HOH . 
Q 6 HOH B 51 551 15 HOH HOH . 
Q 6 HOH B 52 552 100 HOH HOH . 
Q 6 HOH B 53 553 117 HOH HOH . 
Q 6 HOH B 54 554 144 HOH HOH . 
Q 6 HOH B 55 555 61 HOH HOH . 
Q 6 HOH B 56 556 146 HOH HOH . 
Q 6 HOH B 57 557 64 HOH HOH . 
Q 6 HOH B 58 558 111 HOH HOH . 
Q 6 HOH B 59 559 49 HOH HOH . 
Q 6 HOH B 60 560 161 HOH HOH . 
Q 6 HOH B 61 561 160 HOH HOH . 
Q 6 HOH B 62 562 32 HOH HOH . 
Q 6 HOH B 63 563 115 HOH HOH . 
Q 6 HOH B 64 564 110 HOH HOH . 
Q 6 HOH B 65 565 99 HOH HOH . 
Q 6 HOH B 66 566 88 HOH HOH . 
Q 6 HOH B 67 567 157 HOH HOH . 
Q 6 HOH B 68 568 74 HOH HOH . 
Q 6 HOH B 69 569 118 HOH HOH . 
Q 6 HOH B 70 570 154 HOH HOH . 
Q 6 HOH B 71 571 78 HOH HOH . 
Q 6 HOH B 72 572 116 HOH HOH . 
Q 6 HOH B 73 573 31 HOH HOH . 
Q 6 HOH B 74 574 95 HOH HOH . 
Q 6 HOH B 75 575 97 HOH HOH . 
Q 6 HOH B 76 576 54 HOH HOH . 
Q 6 HOH B 77 577 94 HOH HOH . 
Q 6 HOH B 78 578 112 HOH HOH . 
Q 6 HOH B 79 579 14 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . O 5 51.655 9.326 29.168 1 66.17 ? C1 GOL 405 B 1 
HETATM 2 O O1 GOL . . . O 5 51.061 10.363 28.343 1 73.37 ? O1 GOL 405 B 1 
HETATM 3 C C2 GOL . . . O 5 52.827 9.965 29.88 1 79.2 ? C2 GOL 405 B 1 
HETATM 4 O O2 GOL . . . O 5 52.346 11.197 30.418 1 78.76 ? O2 GOL 405 B 1 
HETATM 5 C C3 GOL . . . O 5 53.399 9.109 30.997 1 78.3 ? C3 GOL 405 B 1 
HETATM 6 O O3 GOL . . . O 5 52.985 9.715 32.218 1 82.28 ? O3 GOL 405 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#