data_6S4M
#
_model_server_result.job_id            MRlrFMqvNWArTEMJIJ5hvA 
_model_server_result.datetime_utc      '2025-07-05 06:41:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6s4m 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":502}' 
#
_entry.id    6S4M 
#
_exptl.entry_id    6S4M 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          115.45 
_cell.angle_gamma         90 
_cell.entry_id            6S4M 
_cell.length_a            55.994 
_cell.length_b            70.375 
_cell.length_c            63.44 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6S4M 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 257 n n 
C10 C9 OLC doub 258 n n 
C10 C11 OLC sing 259 n n 
C9 C8 OLC sing 260 n n 
C17 C16 OLC sing 261 z n 
C11 C12 OLC sing 262 n n 
C8 C7 OLC sing 263 n n 
C24 C22 OLC sing 264 n n 
C24 O25 OLC sing 265 n n 
C16 C15 OLC sing 266 n n 
C12 C13 OLC sing 267 n n 
C7 C6 OLC sing 268 n n 
C15 C14 OLC sing 269 n n 
C13 C14 OLC sing 270 n n 
C6 C5 OLC sing 271 n n 
C5 C4 OLC sing 272 n n 
C4 C3 OLC sing 273 n n 
C3 C2 OLC sing 274 n n 
C2 C1 OLC sing 275 n n 
C21 C22 OLC sing 276 n n 
C21 O20 OLC sing 277 n n 
C1 O19 OLC doub 278 n n 
C1 O20 OLC sing 279 n n 
C22 O23 OLC sing 280 n n 
C18 H18 OLC sing 281 n n 
C18 H18A OLC sing 282 n n 
C18 H18B OLC sing 283 n n 
C10 H10 OLC sing 284 n n 
C9 H9 OLC sing 285 n n 
C17 H17 OLC sing 286 n n 
C17 H17A OLC sing 287 n n 
C11 H11 OLC sing 288 n n 
C11 H11A OLC sing 289 n n 
C8 H8 OLC sing 290 n n 
C8 H8A OLC sing 291 n n 
C24 H24 OLC sing 292 n n 
C24 H24A OLC sing 293 n n 
C16 H16 OLC sing 294 n n 
C16 H16A OLC sing 295 n n 
C12 H12 OLC sing 296 n n 
C12 H12A OLC sing 297 n n 
C7 H7 OLC sing 298 n n 
C7 H7A OLC sing 299 n n 
C15 H15 OLC sing 300 n n 
C15 H15A OLC sing 301 n n 
C13 H13 OLC sing 302 n n 
C13 H13A OLC sing 303 n n 
C6 H6 OLC sing 304 n n 
C6 H6A OLC sing 305 n n 
C14 H14 OLC sing 306 n n 
C14 H14A OLC sing 307 n n 
C5 H5 OLC sing 308 n n 
C5 H5A OLC sing 309 n n 
C4 H4 OLC sing 310 n n 
C4 H4A OLC sing 311 n n 
C3 H3 OLC sing 312 n n 
C3 H3A OLC sing 313 n n 
C2 H2 OLC sing 314 n n 
C2 H2A OLC sing 315 n n 
C21 H21 OLC sing 316 n n 
C21 H21A OLC sing 317 n n 
C22 H22 OLC sing 318 n n 
O25 HO25 OLC sing 319 n n 
O23 HO23 OLC sing 320 n n 
#
_atom_sites.entry_id                     6S4M 
_atom_sites.fract_transf_matrix[1][1]    0.017859 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.008498 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01421 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017457 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 OLC A 1 501 501 OLC OLC . 
C 2 OLC A 1 502 502 OLC OLC . 
D 3 CIT A 1 503 701 CIT CIT . 
E 4 HOH A 1 601 601 HOH HOH . 
E 4 HOH A 2 602 603 HOH HOH . 
E 4 HOH A 3 603 602 HOH HOH . 
E 4 HOH A 4 604 604 HOH HOH . 
E 4 HOH A 5 605 606 HOH HOH . 
E 4 HOH A 6 606 609 HOH HOH . 
E 4 HOH A 7 607 607 HOH HOH . 
E 4 HOH A 8 608 605 HOH HOH . 
E 4 HOH A 9 609 612 HOH HOH . 
E 4 HOH A 10 610 608 HOH HOH . 
E 4 HOH A 11 611 614 HOH HOH . 
E 4 HOH A 12 612 658 HOH HOH . 
E 4 HOH A 13 613 616 HOH HOH . 
E 4 HOH A 14 614 613 HOH HOH . 
E 4 HOH A 15 615 624 HOH HOH . 
E 4 HOH A 16 616 627 HOH HOH . 
E 4 HOH A 17 617 620 HOH HOH . 
E 4 HOH A 18 618 610 HOH HOH . 
E 4 HOH A 19 619 618 HOH HOH . 
E 4 HOH A 20 620 617 HOH HOH . 
E 4 HOH A 21 621 615 HOH HOH . 
E 4 HOH A 22 622 623 HOH HOH . 
E 4 HOH A 23 623 659 HOH HOH . 
E 4 HOH A 24 624 631 HOH HOH . 
E 4 HOH A 25 625 621 HOH HOH . 
E 4 HOH A 26 626 622 HOH HOH . 
E 4 HOH A 27 627 611 HOH HOH . 
E 4 HOH A 28 628 625 HOH HOH . 
E 4 HOH A 29 629 619 HOH HOH . 
E 4 HOH A 30 630 626 HOH HOH . 
E 4 HOH A 31 631 628 HOH HOH . 
E 4 HOH A 32 632 634 HOH HOH . 
E 4 HOH A 33 633 636 HOH HOH . 
E 4 HOH A 34 634 629 HOH HOH . 
E 4 HOH A 35 635 630 HOH HOH . 
E 4 HOH A 36 636 637 HOH HOH . 
E 4 HOH A 37 637 633 HOH HOH . 
E 4 HOH A 38 638 655 HOH HOH . 
E 4 HOH A 39 639 642 HOH HOH . 
E 4 HOH A 40 640 639 HOH HOH . 
E 4 HOH A 41 641 638 HOH HOH . 
E 4 HOH A 42 642 640 HOH HOH . 
E 4 HOH A 43 643 632 HOH HOH . 
E 4 HOH A 44 644 641 HOH HOH . 
E 4 HOH A 45 645 643 HOH HOH . 
E 4 HOH A 46 646 635 HOH HOH . 
E 4 HOH A 47 647 648 HOH HOH . 
E 4 HOH A 48 648 646 HOH HOH . 
E 4 HOH A 49 649 647 HOH HOH . 
E 4 HOH A 50 650 645 HOH HOH . 
E 4 HOH A 51 651 644 HOH HOH . 
E 4 HOH A 52 652 651 HOH HOH . 
E 4 HOH A 53 653 653 HOH HOH . 
E 4 HOH A 54 654 650 HOH HOH . 
E 4 HOH A 55 655 652 HOH HOH . 
E 4 HOH A 56 656 657 HOH HOH . 
E 4 HOH A 57 657 649 HOH HOH . 
E 4 HOH A 58 658 654 HOH HOH . 
E 4 HOH A 59 659 660 HOH HOH . 
E 4 HOH A 60 660 656 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 OLC . . . C 2 19.557 22.141 -25.458 1 59.55 ? C10 OLC 502 A 1 
HETATM 2 C C9 OLC . . . C 2 20.657 22.601 -24.902 1 59.16 ? C9 OLC 502 A 1 
HETATM 3 C C11 OLC . . . C 2 19.407 20.856 -26.218 1 57.48 ? C11 OLC 502 A 1 
HETATM 4 C C8 OLC . . . C 2 21.967 21.883 -24.798 1 62.31 ? C8 OLC 502 A 1 
HETATM 5 C C24 OLC . . . C 2 30.457 16.226 -23.277 1 77.52 ? C24 OLC 502 A 1 
HETATM 6 C C12 OLC . . . C 2 18.158 20.794 -27.05 1 55.47 ? C12 OLC 502 A 1 
HETATM 7 C C7 OLC . . . C 2 23.066 22.478 -25.631 1 62.51 ? C7 OLC 502 A 1 
HETATM 8 C C15 OLC . . . C 2 16.076 19.335 -29.486 1 53.43 ? C15 OLC 502 A 1 
HETATM 9 C C13 OLC . . . C 2 18.221 19.808 -28.21 1 55.06 ? C13 OLC 502 A 1 
HETATM 10 C C6 OLC . . . C 2 24.398 21.746 -25.51 1 63.37 ? C6 OLC 502 A 1 
HETATM 11 C C14 OLC . . . C 2 17 18.927 -28.367 1 54.43 ? C14 OLC 502 A 1 
HETATM 12 C C5 OLC . . . C 2 25.144 22.03 -24.225 1 67.36 ? C5 OLC 502 A 1 
HETATM 13 C C4 OLC . . . C 2 26.023 20.899 -23.731 1 72.17 ? C4 OLC 502 A 1 
HETATM 14 C C3 OLC . . . C 2 26.399 20.995 -22.253 1 77.29 ? C3 OLC 502 A 1 
HETATM 15 C C2 OLC . . . C 2 27.772 20.435 -21.937 1 82.61 ? C2 OLC 502 A 1 
HETATM 16 C C21 OLC . . . C 2 29.942 18.119 -21.684 1 82.05 ? C21 OLC 502 A 1 
HETATM 17 C C1 OLC . . . C 2 27.757 19.021 -21.396 1 86.73 ? C1 OLC 502 A 1 
HETATM 18 C C22 OLC . . . C 2 29.407 16.914 -22.43 1 79.39 ? C22 OLC 502 A 1 
HETATM 19 O O19 OLC . . . C 2 26.816 18.273 -21.448 1 89.31 ? O19 OLC 502 A 1 
HETATM 20 O O25 OLC . . . C 2 29.878 15.212 -24.094 1 74.95 ? O25 OLC 502 A 1 
HETATM 21 O O23 OLC . . . C 2 28.847 15.975 -21.513 1 74.81 ? O23 OLC 502 A 1 
HETATM 22 O O20 OLC . . . C 2 28.918 18.684 -20.83 1 86.83 ? O20 OLC 502 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           337 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           22 
#