data_6S63 # _model_server_result.job_id 47nBowIjIS9CyZHBqbpT3A _model_server_result.datetime_utc '2025-08-05 21:04:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6s63 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6S63 # _exptl.entry_id 6S63 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 226.441 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEXADECANE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6S63 _cell.length_a 45.91 _cell.length_b 48.351 _cell.length_c 105.364 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6S63 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PCA 1 A PCA 7 1_555 A N ALA 2 A ALA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale2 A NZ LYS 220 A LYS 226 1_555 B C15 RET . A RET 300 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.27 ? covale ? covale3 A NZ LYS 220 A LYS 226 1_555 B C15 RET . A RET 300 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.27 ? metalc ? metalc1 A OD2 ASP 5 A ASP 11 1_555 L CA CA . A CA 713 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc2 A OD1 ASP 5 A ASP 11 1_555 M NA NA . A NA 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc3 A OD1 ASP 9 A ASP 15 1_555 M NA NA . A NA 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? metalc ? metalc4 A O ARG 11 A ARG 17 1_555 M NA NA . A NA 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.137 ? metalc ? metalc5 A OG1 THR 14 A THR 20 1_555 M NA NA . A NA 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? metalc ? metalc6 A OD1 ASP 40 A ASP 46 1_555 L CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.816 ? metalc ? metalc7 A OD2 ASP 40 A ASP 46 1_555 L CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc8 A OD2 ASP 42 A ASP 48 1_555 L CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc9 A O LEU 234 A LEU 240 1_555 L CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc10 Q O HOH . A HOH 586 1_555 L CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc11 Q O HOH . A HOH 589 1_555 L CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? # _chem_comp.formula 'C16 H34' _chem_comp.formula_weight 226.441 _chem_comp.id R16 _chem_comp.mon_nstd_flag . _chem_comp.name HEXADECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C27 C28 R16 sing 321 n n C27 H271 R16 sing 322 n n C27 H272 R16 sing 323 n n C27 H273 R16 sing 324 n n C28 C29 R16 sing 325 n n C28 H281 R16 sing 326 n n C28 H282 R16 sing 327 n n C29 C30 R16 sing 328 n n C29 H291 R16 sing 329 n n C29 H292 R16 sing 330 n n C30 C31 R16 sing 331 n n C30 H301 R16 sing 332 n n C30 H302 R16 sing 333 n n C31 C32 R16 sing 334 n n C31 H311 R16 sing 335 n n C31 H312 R16 sing 336 n n C32 C33 R16 sing 337 n n C32 H321 R16 sing 338 n n C32 H322 R16 sing 339 n n C33 C34 R16 sing 340 n n C33 H331 R16 sing 341 n n C33 H332 R16 sing 342 n n C34 C35 R16 sing 343 n n C34 H341 R16 sing 344 n n C34 H342 R16 sing 345 n n C35 C36 R16 sing 346 n n C35 H351 R16 sing 347 n n C35 H352 R16 sing 348 n n C36 C37 R16 sing 349 n n C36 H361 R16 sing 350 n n C36 H362 R16 sing 351 n n C37 C38 R16 sing 352 n n C37 H371 R16 sing 353 n n C37 H372 R16 sing 354 n n C38 C39 R16 sing 355 n n C38 H381 R16 sing 356 n n C38 H382 R16 sing 357 n n C39 C40 R16 sing 358 n n C39 H391 R16 sing 359 n n C39 H392 R16 sing 360 n n C40 C41 R16 sing 361 n n C40 H401 R16 sing 362 n n C40 H402 R16 sing 363 n n C41 C42 R16 sing 364 n n C41 H411 R16 sing 365 n n C41 H412 R16 sing 366 n n C42 H421 R16 sing 367 n n C42 H422 R16 sing 368 n n C42 H423 R16 sing 369 n n # _atom_sites.entry_id 6S63 _atom_sites.fract_transf_matrix[1][1] 0.021782 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020682 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009491 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET A 1 300 300 RET RET . C 3 R16 A 1 302 302 R16 R16 . D 3 R16 A 1 303 303 R16 R16 . E 3 R16 A 1 304 304 R16 R16 . F 3 R16 A 1 305 305 R16 R16 . G 4 DD9 A 1 308 308 DD9 DD9 . H 4 DD9 A 1 309 309 DD9 DD9 . I 4 DD9 A 1 310 310 DD9 DD9 . J 4 DD9 A 1 311 311 DD9 DD9 . K 4 DD9 A 1 312 312 DD9 DD9 . L 5 CA A 1 713 713 CA CA . M 6 NA A 1 714 714 NA NA . N 7 CL A 1 715 715 CL CL . O 7 CL A 1 716 716 CL CL . P 7 CL A 1 717 717 CL CL . Q 8 HOH A 1 401 401 HOH HOH . Q 8 HOH A 2 402 402 HOH HOH . Q 8 HOH A 3 404 404 HOH HOH . Q 8 HOH A 4 406 406 HOH HOH . Q 8 HOH A 5 407 407 HOH HOH . Q 8 HOH A 6 411 411 HOH HOH . Q 8 HOH A 7 501 501 HOH HOH . Q 8 HOH A 8 512 512 HOH HOH . Q 8 HOH A 9 513 513 HOH HOH . Q 8 HOH A 10 520 520 HOH HOH . Q 8 HOH A 11 523 523 HOH HOH . Q 8 HOH A 12 525 525 HOH HOH . Q 8 HOH A 13 527 527 HOH HOH . Q 8 HOH A 14 528 528 HOH HOH . Q 8 HOH A 15 531 531 HOH HOH . Q 8 HOH A 16 534 534 HOH HOH . Q 8 HOH A 17 536 536 HOH HOH . Q 8 HOH A 18 538 538 HOH HOH . Q 8 HOH A 19 541 541 HOH HOH . Q 8 HOH A 20 544 544 HOH HOH . Q 8 HOH A 21 545 545 HOH HOH . Q 8 HOH A 22 546 546 HOH HOH . Q 8 HOH A 23 547 547 HOH HOH . Q 8 HOH A 24 549 549 HOH HOH . Q 8 HOH A 25 553 553 HOH HOH . Q 8 HOH A 26 554 554 HOH HOH . Q 8 HOH A 27 555 555 HOH HOH . Q 8 HOH A 28 556 556 HOH HOH . Q 8 HOH A 29 558 558 HOH HOH . Q 8 HOH A 30 561 561 HOH HOH . Q 8 HOH A 31 567 567 HOH HOH . Q 8 HOH A 32 575 575 HOH HOH . Q 8 HOH A 33 576 576 HOH HOH . Q 8 HOH A 34 578 578 HOH HOH . Q 8 HOH A 35 580 580 HOH HOH . Q 8 HOH A 36 582 582 HOH HOH . Q 8 HOH A 37 583 583 HOH HOH . Q 8 HOH A 38 584 584 HOH HOH . Q 8 HOH A 39 586 586 HOH HOH . Q 8 HOH A 40 587 587 HOH HOH . Q 8 HOH A 41 588 588 HOH HOH . Q 8 HOH A 42 589 589 HOH HOH . Q 8 HOH A 43 590 590 HOH HOH . Q 8 HOH A 44 591 591 HOH HOH . Q 8 HOH A 45 592 592 HOH HOH . Q 8 HOH A 46 593 593 HOH HOH . Q 8 HOH A 47 594 594 HOH HOH . Q 8 HOH A 48 595 595 HOH HOH . Q 8 HOH A 49 596 596 HOH HOH . Q 8 HOH A 50 598 598 HOH HOH . Q 8 HOH A 51 599 599 HOH HOH . Q 8 HOH A 52 600 600 HOH HOH . Q 8 HOH A 53 601 601 HOH HOH . Q 8 HOH A 54 602 602 HOH HOH . Q 8 HOH A 55 603 603 HOH HOH . Q 8 HOH A 56 604 604 HOH HOH . Q 8 HOH A 57 622 622 HOH HOH . Q 8 HOH A 58 625 625 HOH HOH . Q 8 HOH A 59 626 626 HOH HOH . Q 8 HOH A 60 627 627 HOH HOH . Q 8 HOH A 61 629 629 HOH HOH . Q 8 HOH A 62 630 630 HOH HOH . Q 8 HOH A 63 632 632 HOH HOH . Q 8 HOH A 64 633 633 HOH HOH . Q 8 HOH A 65 634 634 HOH HOH . Q 8 HOH A 66 635 635 HOH HOH . Q 8 HOH A 67 636 636 HOH HOH . Q 8 HOH A 68 637 637 HOH HOH . Q 8 HOH A 69 638 638 HOH HOH . Q 8 HOH A 70 641 641 HOH HOH . Q 8 HOH A 71 642 642 HOH HOH . Q 8 HOH A 72 645 645 HOH HOH . Q 8 HOH A 73 649 649 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C27 R16 . . . C 3 10.181 -10.293 -26.27 1 35.16 ? C27 R16 302 A 1 HETATM 2 C C28 R16 . . . C 3 11.242 -10.699 -25.278 1 34.9 ? C28 R16 302 A 1 HETATM 3 C C29 R16 . . . C 3 10.707 -11.433 -24.087 1 36.86 ? C29 R16 302 A 1 HETATM 4 C C30 R16 . . . C 3 11.639 -11.432 -22.912 1 37.76 ? C30 R16 302 A 1 HETATM 5 C C31 R16 . . . C 3 11.163 -12.268 -21.765 1 32.29 ? C31 R16 302 A 1 HETATM 6 C C32 R16 . . . C 3 11.87 -11.99 -20.461 1 33.72 ? C32 R16 302 A 1 HETATM 7 C C33 R16 . . . C 3 13.015 -12.927 -20.143 1 32.86 ? C33 R16 302 A 1 HETATM 8 C C34 R16 . . . C 3 13.491 -12.846 -18.709 1 37.02 ? C34 R16 302 A 1 HETATM 9 C C35 R16 . . . C 3 13.978 -14.141 -18.125 1 36.3 ? C35 R16 302 A 1 HETATM 10 C C36 R16 . . . C 3 13.87 -14.219 -16.617 1 34.24 ? C36 R16 302 A 1 HETATM 11 C C37 R16 . . . C 3 14.961 -13.493 -15.858 1 38.46 ? C37 R16 302 A 1 HETATM 12 C C38 R16 . . . C 3 14.702 -13.384 -14.377 1 36.27 ? C38 R16 302 A 1 HETATM 13 C C39 R16 . . . C 3 15.839 -12.798 -13.571 1 40.95 ? C39 R16 302 A 1 HETATM 14 C C40 R16 . . . C 3 15.661 -12.923 -12.073 1 43.47 ? C40 R16 302 A 1 HETATM 15 C C41 R16 . . . C 3 16.858 -12.503 -11.259 1 51.41 ? C41 R16 302 A 1 HETATM 16 C C42 R16 . . . C 3 16.725 -12.796 -9.782 1 49.88 ? C42 R16 302 A 1 HETATM 17 H H271 R16 . . . C 3 9.69 -11.081 -26.56 1 42.34 ? H271 R16 302 A 1 HETATM 18 H H272 R16 . . . C 3 10.599 -9.871 -27.041 1 42.34 ? H272 R16 302 A 1 HETATM 19 H H273 R16 . . . C 3 9.567 -9.666 -25.851 1 42.34 ? H273 R16 302 A 1 HETATM 20 H H281 R16 . . . C 3 11.71 -9.893 -24.966 1 42.02 ? H281 R16 302 A 1 HETATM 21 H H282 R16 . . . C 3 11.9 -11.27 -25.731 1 42.02 ? H282 R16 302 A 1 HETATM 22 H H291 R16 . . . C 3 9.859 -11.023 -23.818 1 44.38 ? H291 R16 302 A 1 HETATM 23 H H292 R16 . . . C 3 10.523 -12.362 -24.345 1 44.38 ? H292 R16 302 A 1 HETATM 24 H H301 R16 . . . C 3 11.757 -10.508 -22.604 1 45.46 ? H301 R16 302 A 1 HETATM 25 H H302 R16 . . . C 3 12.515 -11.764 -23.203 1 45.46 ? H302 R16 302 A 1 HETATM 26 H H311 R16 . . . C 3 10.203 -12.112 -21.641 1 38.89 ? H311 R16 302 A 1 HETATM 27 H H312 R16 . . . C 3 11.283 -13.214 -21.995 1 38.89 ? H312 R16 302 A 1 HETATM 28 H H321 R16 . . . C 3 12.214 -11.072 -20.478 1 40.61 ? H321 R16 302 A 1 HETATM 29 H H322 R16 . . . C 3 11.212 -12.044 -19.735 1 40.61 ? H322 R16 302 A 1 HETATM 30 H H331 R16 . . . C 3 12.731 -13.847 -20.331 1 39.57 ? H331 R16 302 A 1 HETATM 31 H H332 R16 . . . C 3 13.767 -12.719 -20.737 1 39.57 ? H332 R16 302 A 1 HETATM 32 H H341 R16 . . . C 3 12.756 -12.513 -18.155 1 44.56 ? H341 R16 302 A 1 HETATM 33 H H342 R16 . . . C 3 14.218 -12.189 -18.659 1 44.56 ? H342 R16 302 A 1 HETATM 34 H H351 R16 . . . C 3 13.461 -14.879 -18.514 1 43.7 ? H351 R16 302 A 1 HETATM 35 H H352 R16 . . . C 3 14.916 -14.269 -18.38 1 43.7 ? H352 R16 302 A 1 HETATM 36 H H361 R16 . . . C 3 13.002 -13.85 -16.345 1 41.23 ? H361 R16 302 A 1 HETATM 37 H H362 R16 . . . C 3 13.883 -15.164 -16.352 1 41.23 ? H362 R16 302 A 1 HETATM 38 H H371 R16 . . . C 3 15.058 -12.59 -16.229 1 46.3 ? H371 R16 302 A 1 HETATM 39 H H372 R16 . . . C 3 15.81 -13.965 -15.996 1 46.3 ? H372 R16 302 A 1 HETATM 40 H H381 R16 . . . C 3 13.905 -12.829 -14.24 1 43.66 ? H381 R16 302 A 1 HETATM 41 H H382 R16 . . . C 3 14.502 -14.279 -14.029 1 43.66 ? H382 R16 302 A 1 HETATM 42 H H391 R16 . . . C 3 15.932 -11.849 -13.799 1 49.28 ? H391 R16 302 A 1 HETATM 43 H H392 R16 . . . C 3 16.672 -13.249 -13.828 1 49.28 ? H392 R16 302 A 1 HETATM 44 H H401 R16 . . . C 3 14.892 -12.378 -11.802 1 52.31 ? H401 R16 302 A 1 HETATM 45 H H402 R16 . . . C 3 15.453 -13.857 -11.86 1 52.31 ? H402 R16 302 A 1 HETATM 46 H H411 R16 . . . C 3 17.652 -12.967 -11.604 1 61.84 ? H411 R16 302 A 1 HETATM 47 H H412 R16 . . . C 3 16.999 -11.539 -11.38 1 61.84 ? H412 R16 302 A 1 HETATM 48 H H421 R16 . . . C 3 17.575 -12.628 -9.339 1 59.99 ? H421 R16 302 A 1 HETATM 49 H H422 R16 . . . C 3 16.473 -13.727 -9.655 1 59.99 ? H422 R16 302 A 1 HETATM 50 H H423 R16 . . . C 3 16.042 -12.221 -9.397 1 59.99 ? H423 R16 302 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 50 #