data_6S63 # _model_server_result.job_id cOR3xzwGcMUoV28oJw1e-g _model_server_result.datetime_utc '2024-11-17 01:59:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6s63 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 6S63 # _exptl.entry_id 6S63 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 226.441 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEXADECANE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6S63 _cell.length_a 45.91 _cell.length_b 48.351 _cell.length_c 105.364 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6S63 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PCA 1 A PCA 7 1_555 A N ALA 2 A ALA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale2 A NZ LYS 220 A LYS 226 1_555 B C15 RET . A RET 300 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.27 ? covale ? covale3 A NZ LYS 220 A LYS 226 1_555 B C15 RET . A RET 300 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.27 ? metalc ? metalc1 A OD2 ASP 5 A ASP 11 1_555 L CA CA . A CA 713 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc2 A OD1 ASP 5 A ASP 11 1_555 M NA NA . A NA 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc3 A OD1 ASP 9 A ASP 15 1_555 M NA NA . A NA 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? metalc ? metalc4 A O ARG 11 A ARG 17 1_555 M NA NA . A NA 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.137 ? metalc ? metalc5 A OG1 THR 14 A THR 20 1_555 M NA NA . A NA 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? metalc ? metalc6 A OD1 ASP 40 A ASP 46 1_555 L CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.816 ? metalc ? metalc7 A OD2 ASP 40 A ASP 46 1_555 L CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc8 A OD2 ASP 42 A ASP 48 1_555 L CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc9 A O LEU 234 A LEU 240 1_555 L CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc10 Q O HOH . A HOH 586 1_555 L CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc11 Q O HOH . A HOH 589 1_555 L CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? # _chem_comp.formula 'C16 H34' _chem_comp.formula_weight 226.441 _chem_comp.id R16 _chem_comp.mon_nstd_flag . _chem_comp.name HEXADECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C27 C28 R16 sing 321 n n C27 H271 R16 sing 322 n n C27 H272 R16 sing 323 n n C27 H273 R16 sing 324 n n C28 C29 R16 sing 325 n n C28 H281 R16 sing 326 n n C28 H282 R16 sing 327 n n C29 C30 R16 sing 328 n n C29 H291 R16 sing 329 n n C29 H292 R16 sing 330 n n C30 C31 R16 sing 331 n n C30 H301 R16 sing 332 n n C30 H302 R16 sing 333 n n C31 C32 R16 sing 334 n n C31 H311 R16 sing 335 n n C31 H312 R16 sing 336 n n C32 C33 R16 sing 337 n n C32 H321 R16 sing 338 n n C32 H322 R16 sing 339 n n C33 C34 R16 sing 340 n n C33 H331 R16 sing 341 n n C33 H332 R16 sing 342 n n C34 C35 R16 sing 343 n n C34 H341 R16 sing 344 n n C34 H342 R16 sing 345 n n C35 C36 R16 sing 346 n n C35 H351 R16 sing 347 n n C35 H352 R16 sing 348 n n C36 C37 R16 sing 349 n n C36 H361 R16 sing 350 n n C36 H362 R16 sing 351 n n C37 C38 R16 sing 352 n n C37 H371 R16 sing 353 n n C37 H372 R16 sing 354 n n C38 C39 R16 sing 355 n n C38 H381 R16 sing 356 n n C38 H382 R16 sing 357 n n C39 C40 R16 sing 358 n n C39 H391 R16 sing 359 n n C39 H392 R16 sing 360 n n C40 C41 R16 sing 361 n n C40 H401 R16 sing 362 n n C40 H402 R16 sing 363 n n C41 C42 R16 sing 364 n n C41 H411 R16 sing 365 n n C41 H412 R16 sing 366 n n C42 H421 R16 sing 367 n n C42 H422 R16 sing 368 n n C42 H423 R16 sing 369 n n # _atom_sites.entry_id 6S63 _atom_sites.fract_transf_matrix[1][1] 0.021782 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020682 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009491 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET A 1 300 300 RET RET . C 3 R16 A 1 302 302 R16 R16 . D 3 R16 A 1 303 303 R16 R16 . E 3 R16 A 1 304 304 R16 R16 . F 3 R16 A 1 305 305 R16 R16 . G 4 DD9 A 1 308 308 DD9 DD9 . H 4 DD9 A 1 309 309 DD9 DD9 . I 4 DD9 A 1 310 310 DD9 DD9 . J 4 DD9 A 1 311 311 DD9 DD9 . K 4 DD9 A 1 312 312 DD9 DD9 . L 5 CA A 1 713 713 CA CA . M 6 NA A 1 714 714 NA NA . N 7 CL A 1 715 715 CL CL . O 7 CL A 1 716 716 CL CL . P 7 CL A 1 717 717 CL CL . Q 8 HOH A 1 401 401 HOH HOH . Q 8 HOH A 2 402 402 HOH HOH . Q 8 HOH A 3 404 404 HOH HOH . Q 8 HOH A 4 406 406 HOH HOH . Q 8 HOH A 5 407 407 HOH HOH . Q 8 HOH A 6 411 411 HOH HOH . Q 8 HOH A 7 501 501 HOH HOH . Q 8 HOH A 8 512 512 HOH HOH . Q 8 HOH A 9 513 513 HOH HOH . Q 8 HOH A 10 520 520 HOH HOH . Q 8 HOH A 11 523 523 HOH HOH . Q 8 HOH A 12 525 525 HOH HOH . Q 8 HOH A 13 527 527 HOH HOH . Q 8 HOH A 14 528 528 HOH HOH . Q 8 HOH A 15 531 531 HOH HOH . Q 8 HOH A 16 534 534 HOH HOH . Q 8 HOH A 17 536 536 HOH HOH . Q 8 HOH A 18 538 538 HOH HOH . Q 8 HOH A 19 541 541 HOH HOH . Q 8 HOH A 20 544 544 HOH HOH . Q 8 HOH A 21 545 545 HOH HOH . Q 8 HOH A 22 546 546 HOH HOH . Q 8 HOH A 23 547 547 HOH HOH . Q 8 HOH A 24 549 549 HOH HOH . Q 8 HOH A 25 553 553 HOH HOH . Q 8 HOH A 26 554 554 HOH HOH . Q 8 HOH A 27 555 555 HOH HOH . Q 8 HOH A 28 556 556 HOH HOH . Q 8 HOH A 29 558 558 HOH HOH . Q 8 HOH A 30 561 561 HOH HOH . Q 8 HOH A 31 567 567 HOH HOH . Q 8 HOH A 32 575 575 HOH HOH . Q 8 HOH A 33 576 576 HOH HOH . Q 8 HOH A 34 578 578 HOH HOH . Q 8 HOH A 35 580 580 HOH HOH . Q 8 HOH A 36 582 582 HOH HOH . Q 8 HOH A 37 583 583 HOH HOH . Q 8 HOH A 38 584 584 HOH HOH . Q 8 HOH A 39 586 586 HOH HOH . Q 8 HOH A 40 587 587 HOH HOH . Q 8 HOH A 41 588 588 HOH HOH . Q 8 HOH A 42 589 589 HOH HOH . Q 8 HOH A 43 590 590 HOH HOH . Q 8 HOH A 44 591 591 HOH HOH . Q 8 HOH A 45 592 592 HOH HOH . Q 8 HOH A 46 593 593 HOH HOH . Q 8 HOH A 47 594 594 HOH HOH . Q 8 HOH A 48 595 595 HOH HOH . Q 8 HOH A 49 596 596 HOH HOH . Q 8 HOH A 50 598 598 HOH HOH . Q 8 HOH A 51 599 599 HOH HOH . Q 8 HOH A 52 600 600 HOH HOH . Q 8 HOH A 53 601 601 HOH HOH . Q 8 HOH A 54 602 602 HOH HOH . Q 8 HOH A 55 603 603 HOH HOH . Q 8 HOH A 56 604 604 HOH HOH . Q 8 HOH A 57 622 622 HOH HOH . Q 8 HOH A 58 625 625 HOH HOH . Q 8 HOH A 59 626 626 HOH HOH . Q 8 HOH A 60 627 627 HOH HOH . Q 8 HOH A 61 629 629 HOH HOH . Q 8 HOH A 62 630 630 HOH HOH . Q 8 HOH A 63 632 632 HOH HOH . Q 8 HOH A 64 633 633 HOH HOH . Q 8 HOH A 65 634 634 HOH HOH . Q 8 HOH A 66 635 635 HOH HOH . Q 8 HOH A 67 636 636 HOH HOH . Q 8 HOH A 68 637 637 HOH HOH . Q 8 HOH A 69 638 638 HOH HOH . Q 8 HOH A 70 641 641 HOH HOH . Q 8 HOH A 71 642 642 HOH HOH . Q 8 HOH A 72 645 645 HOH HOH . Q 8 HOH A 73 649 649 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C27 R16 . . . E 3 7.861 -11.722 -33.48 1 44.87 ? C27 R16 304 A 1 HETATM 2 C C28 R16 . . . E 3 9.191 -11.005 -33.353 1 44.08 ? C28 R16 304 A 1 HETATM 3 C C29 R16 . . . E 3 9.407 -10.322 -32.024 1 38.47 ? C29 R16 304 A 1 HETATM 4 C C30 R16 . . . E 3 10.396 -9.166 -32.068 1 35.69 ? C30 R16 304 A 1 HETATM 5 C C31 R16 . . . E 3 11.55 -9.278 -31.088 1 46 ? C31 R16 304 A 1 HETATM 6 C C32 R16 . . . E 3 12.902 -8.915 -31.672 1 50.81 ? C32 R16 304 A 1 HETATM 7 C C33 R16 . . . E 3 13.836 -8.2 -30.718 1 43.91 ? C33 R16 304 A 1 HETATM 8 C C34 R16 . . . E 3 14.152 -6.769 -31.107 1 40.65 ? C34 R16 304 A 1 HETATM 9 C C35 R16 . . . E 3 15.461 -6.585 -31.857 1 42.92 ? C35 R16 304 A 1 HETATM 10 C C36 R16 . . . E 3 15.345 -6.572 -33.365 1 41.09 ? C36 R16 304 A 1 HETATM 11 C C37 R16 . . . E 3 16.665 -6.372 -34.082 1 36.72 ? C37 R16 304 A 1 HETATM 12 C C38 R16 . . . E 3 16.874 -7.246 -35.296 1 46.57 ? C38 R16 304 A 1 HETATM 13 C C39 R16 . . . E 3 18.323 -7.424 -35.689 1 41.53 ? C39 R16 304 A 1 HETATM 14 C C40 R16 . . . E 3 18.607 -8.683 -36.482 1 48.5 ? C40 R16 304 A 1 HETATM 15 C C41 R16 . . . E 3 17.708 -8.896 -37.676 1 48.62 ? C41 R16 304 A 1 HETATM 16 C C42 R16 . . . E 3 18.204 -9.946 -38.638 1 42.6 ? C42 R16 304 A 1 HETATM 17 H H271 R16 . . . E 3 7.806 -12.155 -34.35 1 53.98 ? H271 R16 304 A 1 HETATM 18 H H272 R16 . . . E 3 7.135 -11.08 -33.392 1 53.98 ? H272 R16 304 A 1 HETATM 19 H H273 R16 . . . E 3 7.785 -12.394 -32.78 1 53.98 ? H273 R16 304 A 1 HETATM 20 H H281 R16 . . . E 3 9.914 -11.654 -33.493 1 53.03 ? H281 R16 304 A 1 HETATM 21 H H282 R16 . . . E 3 9.253 -10.333 -34.066 1 53.03 ? H282 R16 304 A 1 HETATM 22 H H291 R16 . . . E 3 9.724 -10.988 -31.378 1 46.3 ? H291 R16 304 A 1 HETATM 23 H H292 R16 . . . E 3 8.544 -9.984 -31.702 1 46.3 ? H292 R16 304 A 1 HETATM 24 H H301 R16 . . . E 3 10.76 -9.1 -32.976 1 42.97 ? H301 R16 304 A 1 HETATM 25 H H302 R16 . . . E 3 9.91 -8.334 -31.884 1 42.97 ? H302 R16 304 A 1 HETATM 26 H H311 R16 . . . E 3 11.593 -10.198 -30.751 1 55.34 ? H311 R16 304 A 1 HETATM 27 H H312 R16 . . . E 3 11.369 -8.691 -30.324 1 55.34 ? H312 R16 304 A 1 HETATM 28 H H321 R16 . . . E 3 12.762 -8.347 -32.46 1 61.11 ? H321 R16 304 A 1 HETATM 29 H H322 R16 . . . E 3 13.34 -9.738 -31.978 1 61.11 ? H322 R16 304 A 1 HETATM 30 H H331 R16 . . . E 3 14.674 -8.706 -30.664 1 52.84 ? H331 R16 304 A 1 HETATM 31 H H332 R16 . . . E 3 13.434 -8.199 -29.823 1 52.84 ? H332 R16 304 A 1 HETATM 32 H H341 R16 . . . E 3 14.182 -6.225 -30.292 1 48.92 ? H341 R16 304 A 1 HETATM 33 H H342 R16 . . . E 3 13.422 -6.426 -31.663 1 48.92 ? H342 R16 304 A 1 HETATM 34 H H351 R16 . . . E 3 15.864 -5.739 -31.569 1 51.64 ? H351 R16 304 A 1 HETATM 35 H H352 R16 . . . E 3 16.074 -7.305 -31.598 1 51.64 ? H352 R16 304 A 1 HETATM 36 H H361 R16 . . . E 3 14.732 -5.853 -33.628 1 49.45 ? H361 R16 304 A 1 HETATM 37 H H362 R16 . . . E 3 14.95 -7.421 -33.658 1 49.45 ? H362 R16 304 A 1 HETATM 38 H H371 R16 . . . E 3 16.729 -5.433 -34.36 1 44.21 ? H371 R16 304 A 1 HETATM 39 H H372 R16 . . . E 3 17.393 -6.54 -33.446 1 44.21 ? H372 R16 304 A 1 HETATM 40 H H381 R16 . . . E 3 16.487 -8.129 -35.119 1 56.02 ? H381 R16 304 A 1 HETATM 41 H H382 R16 . . . E 3 16.388 -6.854 -36.053 1 56.02 ? H382 R16 304 A 1 HETATM 42 H H391 R16 . . . E 3 18.602 -6.649 -36.222 1 49.98 ? H391 R16 304 A 1 HETATM 43 H H392 R16 . . . E 3 18.872 -7.437 -34.876 1 49.98 ? H392 R16 304 A 1 HETATM 44 H H401 R16 . . . E 3 18.52 -9.456 -35.884 1 58.34 ? H401 R16 304 A 1 HETATM 45 H H402 R16 . . . E 3 19.537 -8.653 -36.794 1 58.34 ? H402 R16 304 A 1 HETATM 46 H H411 R16 . . . E 3 16.817 -9.157 -37.356 1 58.49 ? H411 R16 304 A 1 HETATM 47 H H412 R16 . . . E 3 17.616 -8.045 -38.156 1 58.49 ? H412 R16 304 A 1 HETATM 48 H H421 R16 . . . E 3 17.559 -10.059 -39.358 1 51.26 ? H421 R16 304 A 1 HETATM 49 H H422 R16 . . . E 3 19.059 -9.669 -39.011 1 51.26 ? H422 R16 304 A 1 HETATM 50 H H423 R16 . . . E 3 18.315 -10.791 -38.169 1 51.26 ? H423 R16 304 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 50 #