data_6S63 # _model_server_result.job_id nKQgUwRJhF4PLYg83hmJaw _model_server_result.datetime_utc '2024-11-17 02:07:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6s63 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 6S63 # _exptl.entry_id 6S63 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 226.441 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEXADECANE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6S63 _cell.length_a 45.91 _cell.length_b 48.351 _cell.length_c 105.364 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6S63 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PCA 1 A PCA 7 1_555 A N ALA 2 A ALA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale2 A NZ LYS 220 A LYS 226 1_555 B C15 RET . A RET 300 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.27 ? covale ? covale3 A NZ LYS 220 A LYS 226 1_555 B C15 RET . A RET 300 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.27 ? metalc ? metalc1 A OD2 ASP 5 A ASP 11 1_555 L CA CA . A CA 713 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc2 A OD1 ASP 5 A ASP 11 1_555 M NA NA . A NA 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc3 A OD1 ASP 9 A ASP 15 1_555 M NA NA . A NA 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? metalc ? metalc4 A O ARG 11 A ARG 17 1_555 M NA NA . A NA 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.137 ? metalc ? metalc5 A OG1 THR 14 A THR 20 1_555 M NA NA . A NA 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? metalc ? metalc6 A OD1 ASP 40 A ASP 46 1_555 L CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.816 ? metalc ? metalc7 A OD2 ASP 40 A ASP 46 1_555 L CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc8 A OD2 ASP 42 A ASP 48 1_555 L CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc9 A O LEU 234 A LEU 240 1_555 L CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc10 Q O HOH . A HOH 586 1_555 L CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc11 Q O HOH . A HOH 589 1_555 L CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? # _chem_comp.formula 'C16 H34' _chem_comp.formula_weight 226.441 _chem_comp.id R16 _chem_comp.mon_nstd_flag . _chem_comp.name HEXADECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C27 C28 R16 sing 321 n n C27 H271 R16 sing 322 n n C27 H272 R16 sing 323 n n C27 H273 R16 sing 324 n n C28 C29 R16 sing 325 n n C28 H281 R16 sing 326 n n C28 H282 R16 sing 327 n n C29 C30 R16 sing 328 n n C29 H291 R16 sing 329 n n C29 H292 R16 sing 330 n n C30 C31 R16 sing 331 n n C30 H301 R16 sing 332 n n C30 H302 R16 sing 333 n n C31 C32 R16 sing 334 n n C31 H311 R16 sing 335 n n C31 H312 R16 sing 336 n n C32 C33 R16 sing 337 n n C32 H321 R16 sing 338 n n C32 H322 R16 sing 339 n n C33 C34 R16 sing 340 n n C33 H331 R16 sing 341 n n C33 H332 R16 sing 342 n n C34 C35 R16 sing 343 n n C34 H341 R16 sing 344 n n C34 H342 R16 sing 345 n n C35 C36 R16 sing 346 n n C35 H351 R16 sing 347 n n C35 H352 R16 sing 348 n n C36 C37 R16 sing 349 n n C36 H361 R16 sing 350 n n C36 H362 R16 sing 351 n n C37 C38 R16 sing 352 n n C37 H371 R16 sing 353 n n C37 H372 R16 sing 354 n n C38 C39 R16 sing 355 n n C38 H381 R16 sing 356 n n C38 H382 R16 sing 357 n n C39 C40 R16 sing 358 n n C39 H391 R16 sing 359 n n C39 H392 R16 sing 360 n n C40 C41 R16 sing 361 n n C40 H401 R16 sing 362 n n C40 H402 R16 sing 363 n n C41 C42 R16 sing 364 n n C41 H411 R16 sing 365 n n C41 H412 R16 sing 366 n n C42 H421 R16 sing 367 n n C42 H422 R16 sing 368 n n C42 H423 R16 sing 369 n n # _atom_sites.entry_id 6S63 _atom_sites.fract_transf_matrix[1][1] 0.021782 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020682 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009491 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET A 1 300 300 RET RET . C 3 R16 A 1 302 302 R16 R16 . D 3 R16 A 1 303 303 R16 R16 . E 3 R16 A 1 304 304 R16 R16 . F 3 R16 A 1 305 305 R16 R16 . G 4 DD9 A 1 308 308 DD9 DD9 . H 4 DD9 A 1 309 309 DD9 DD9 . I 4 DD9 A 1 310 310 DD9 DD9 . J 4 DD9 A 1 311 311 DD9 DD9 . K 4 DD9 A 1 312 312 DD9 DD9 . L 5 CA A 1 713 713 CA CA . M 6 NA A 1 714 714 NA NA . N 7 CL A 1 715 715 CL CL . O 7 CL A 1 716 716 CL CL . P 7 CL A 1 717 717 CL CL . Q 8 HOH A 1 401 401 HOH HOH . Q 8 HOH A 2 402 402 HOH HOH . Q 8 HOH A 3 404 404 HOH HOH . Q 8 HOH A 4 406 406 HOH HOH . Q 8 HOH A 5 407 407 HOH HOH . Q 8 HOH A 6 411 411 HOH HOH . Q 8 HOH A 7 501 501 HOH HOH . Q 8 HOH A 8 512 512 HOH HOH . Q 8 HOH A 9 513 513 HOH HOH . Q 8 HOH A 10 520 520 HOH HOH . Q 8 HOH A 11 523 523 HOH HOH . Q 8 HOH A 12 525 525 HOH HOH . Q 8 HOH A 13 527 527 HOH HOH . Q 8 HOH A 14 528 528 HOH HOH . Q 8 HOH A 15 531 531 HOH HOH . Q 8 HOH A 16 534 534 HOH HOH . Q 8 HOH A 17 536 536 HOH HOH . Q 8 HOH A 18 538 538 HOH HOH . Q 8 HOH A 19 541 541 HOH HOH . Q 8 HOH A 20 544 544 HOH HOH . Q 8 HOH A 21 545 545 HOH HOH . Q 8 HOH A 22 546 546 HOH HOH . Q 8 HOH A 23 547 547 HOH HOH . Q 8 HOH A 24 549 549 HOH HOH . Q 8 HOH A 25 553 553 HOH HOH . Q 8 HOH A 26 554 554 HOH HOH . Q 8 HOH A 27 555 555 HOH HOH . Q 8 HOH A 28 556 556 HOH HOH . Q 8 HOH A 29 558 558 HOH HOH . Q 8 HOH A 30 561 561 HOH HOH . Q 8 HOH A 31 567 567 HOH HOH . Q 8 HOH A 32 575 575 HOH HOH . Q 8 HOH A 33 576 576 HOH HOH . Q 8 HOH A 34 578 578 HOH HOH . Q 8 HOH A 35 580 580 HOH HOH . Q 8 HOH A 36 582 582 HOH HOH . Q 8 HOH A 37 583 583 HOH HOH . Q 8 HOH A 38 584 584 HOH HOH . Q 8 HOH A 39 586 586 HOH HOH . Q 8 HOH A 40 587 587 HOH HOH . Q 8 HOH A 41 588 588 HOH HOH . Q 8 HOH A 42 589 589 HOH HOH . Q 8 HOH A 43 590 590 HOH HOH . Q 8 HOH A 44 591 591 HOH HOH . Q 8 HOH A 45 592 592 HOH HOH . Q 8 HOH A 46 593 593 HOH HOH . Q 8 HOH A 47 594 594 HOH HOH . Q 8 HOH A 48 595 595 HOH HOH . Q 8 HOH A 49 596 596 HOH HOH . Q 8 HOH A 50 598 598 HOH HOH . Q 8 HOH A 51 599 599 HOH HOH . Q 8 HOH A 52 600 600 HOH HOH . Q 8 HOH A 53 601 601 HOH HOH . Q 8 HOH A 54 602 602 HOH HOH . Q 8 HOH A 55 603 603 HOH HOH . Q 8 HOH A 56 604 604 HOH HOH . Q 8 HOH A 57 622 622 HOH HOH . Q 8 HOH A 58 625 625 HOH HOH . Q 8 HOH A 59 626 626 HOH HOH . Q 8 HOH A 60 627 627 HOH HOH . Q 8 HOH A 61 629 629 HOH HOH . Q 8 HOH A 62 630 630 HOH HOH . Q 8 HOH A 63 632 632 HOH HOH . Q 8 HOH A 64 633 633 HOH HOH . Q 8 HOH A 65 634 634 HOH HOH . Q 8 HOH A 66 635 635 HOH HOH . Q 8 HOH A 67 636 636 HOH HOH . Q 8 HOH A 68 637 637 HOH HOH . Q 8 HOH A 69 638 638 HOH HOH . Q 8 HOH A 70 641 641 HOH HOH . Q 8 HOH A 71 642 642 HOH HOH . Q 8 HOH A 72 645 645 HOH HOH . Q 8 HOH A 73 649 649 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C27 R16 . . . F 3 -17.802 4.228 -31.65 1 46.69 ? C27 R16 305 A 1 HETATM 2 C C28 R16 . . . F 3 -16.752 5.308 -31.811 1 40.57 ? C28 R16 305 A 1 HETATM 3 C C29 R16 . . . F 3 -17.004 6.233 -32.969 1 47.42 ? C29 R16 305 A 1 HETATM 4 C C30 R16 . . . F 3 -17.054 5.543 -34.31 1 44.63 ? C30 R16 305 A 1 HETATM 5 C C31 R16 . . . F 3 -16.955 6.482 -35.483 1 46.7 ? C31 R16 305 A 1 HETATM 6 C C32 R16 . . . F 3 -17.445 5.915 -36.79 1 48.31 ? C32 R16 305 A 1 HETATM 7 C C33 R16 . . . F 3 -17.738 6.974 -37.822 1 48.95 ? C33 R16 305 A 1 HETATM 8 C C34 R16 . . . F 3 -18.166 6.445 -39.16 1 44.43 ? C34 R16 305 A 1 HETATM 9 C C35 R16 . . . F 3 -18.067 7.461 -40.272 1 53.36 ? C35 R16 305 A 1 HETATM 10 C C36 R16 . . . F 3 -18.805 7.084 -41.536 1 55.07 ? C36 R16 305 A 1 HETATM 11 C C37 R16 . . . F 3 -18.146 7.574 -42.801 1 57.52 ? C37 R16 305 A 1 HETATM 12 C C38 R16 . . . F 3 -16.982 6.727 -43.256 1 50.9 ? C38 R16 305 A 1 HETATM 13 C C39 R16 . . . F 3 -16.005 7.453 -44.148 1 54.7 ? C39 R16 305 A 1 HETATM 14 C C40 R16 . . . F 3 -14.923 6.571 -44.73 1 47.98 ? C40 R16 305 A 1 HETATM 15 C C41 R16 . . . F 3 -14.91 6.498 -46.238 1 45.28 ? C41 R16 305 A 1 HETATM 16 C C42 R16 . . . F 3 -14.473 7.772 -46.923 1 43.45 ? C42 R16 305 A 1 HETATM 17 H H271 R16 . . . F 3 -17.715 3.579 -32.37 1 56.17 ? H271 R16 305 A 1 HETATM 18 H H272 R16 . . . F 3 -17.679 3.78 -30.795 1 56.17 ? H272 R16 305 A 1 HETATM 19 H H273 R16 . . . F 3 -18.688 4.627 -31.681 1 56.17 ? H273 R16 305 A 1 HETATM 20 H H281 R16 . . . F 3 -15.875 4.883 -31.932 1 48.82 ? H281 R16 305 A 1 HETATM 21 H H282 R16 . . . F 3 -16.715 5.84 -30.986 1 48.82 ? H282 R16 305 A 1 HETATM 22 H H291 R16 . . . F 3 -16.296 6.911 -32.99 1 57.04 ? H291 R16 305 A 1 HETATM 23 H H292 R16 . . . F 3 -17.856 6.697 -32.822 1 57.04 ? H292 R16 305 A 1 HETATM 24 H H301 R16 . . . F 3 -16.317 4.897 -34.36 1 53.69 ? H301 R16 305 A 1 HETATM 25 H H302 R16 . . . F 3 -17.895 5.043 -34.376 1 53.69 ? H302 R16 305 A 1 HETATM 26 H H311 R16 . . . F 3 -16.019 6.752 -35.591 1 56.18 ? H311 R16 305 A 1 HETATM 27 H H312 R16 . . . F 3 -17.473 7.291 -35.28 1 56.18 ? H312 R16 305 A 1 HETATM 28 H H321 R16 . . . F 3 -18.262 5.397 -36.627 1 58.11 ? H321 R16 305 A 1 HETATM 29 H H322 R16 . . . F 3 -16.767 5.302 -37.146 1 58.11 ? H322 R16 305 A 1 HETATM 30 H H331 R16 . . . F 3 -18.444 7.561 -37.476 1 58.88 ? H331 R16 305 A 1 HETATM 31 H H332 R16 . . . F 3 -16.932 7.521 -37.945 1 58.88 ? H332 R16 305 A 1 HETATM 32 H H341 R16 . . . F 3 -19.095 6.136 -39.096 1 53.46 ? H341 R16 305 A 1 HETATM 33 H H342 R16 . . . F 3 -17.608 5.671 -39.388 1 53.46 ? H342 R16 305 A 1 HETATM 34 H H351 R16 . . . F 3 -17.12 7.596 -40.49 1 64.18 ? H351 R16 305 A 1 HETATM 35 H H352 R16 . . . F 3 -18.42 8.316 -39.947 1 64.18 ? H352 R16 305 A 1 HETATM 36 H H361 R16 . . . F 3 -18.88 6.107 -41.578 1 66.22 ? H361 R16 305 A 1 HETATM 37 H H362 R16 . . . F 3 -19.713 7.451 -41.492 1 66.22 ? H362 R16 305 A 1 HETATM 38 H H371 R16 . . . F 3 -17.83 8.491 -42.656 1 69.16 ? H371 R16 305 A 1 HETATM 39 H H372 R16 . . . F 3 -18.816 7.599 -43.516 1 69.16 ? H372 R16 305 A 1 HETATM 40 H H381 R16 . . . F 3 -16.503 6.399 -42.466 1 61.22 ? H381 R16 305 A 1 HETATM 41 H H382 R16 . . . F 3 -17.33 5.947 -43.739 1 61.22 ? H382 R16 305 A 1 HETATM 42 H H391 R16 . . . F 3 -15.58 8.171 -43.632 1 65.78 ? H391 R16 305 A 1 HETATM 43 H H392 R16 . . . F 3 -16.502 7.87 -44.884 1 65.78 ? H392 R16 305 A 1 HETATM 44 H H401 R16 . . . F 3 -15.033 5.663 -44.375 1 57.71 ? H401 R16 305 A 1 HETATM 45 H H402 R16 . . . F 3 -14.052 6.904 -44.427 1 57.71 ? H402 R16 305 A 1 HETATM 46 H H411 R16 . . . F 3 -14.311 5.77 -46.512 1 54.48 ? H411 R16 305 A 1 HETATM 47 H H412 R16 . . . F 3 -15.814 6.269 -46.547 1 54.48 ? H412 R16 305 A 1 HETATM 48 H H421 R16 . . . F 3 -14.39 7.616 -47.879 1 52.28 ? H421 R16 305 A 1 HETATM 49 H H422 R16 . . . F 3 -15.133 8.469 -46.765 1 52.28 ? H422 R16 305 A 1 HETATM 50 H H423 R16 . . . F 3 -13.614 8.056 -46.566 1 52.28 ? H423 R16 305 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 363 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 50 #