data_6S66 # _model_server_result.job_id 6m5X9102vTF6kXFPBKtyzg _model_server_result.datetime_utc '2024-12-23 05:12:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6s66 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 6S66 # _exptl.entry_id 6S66 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.371 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MYRISTIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 117.38 _cell.angle_gamma 90 _cell.entry_id 6S66 _cell.length_a 122.037 _cell.length_b 61.569 _cell.length_c 80.021 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6S66 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,F 1 1 B,D,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 142 A LYS 357 1_555 C C1 MYR . A MYR 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.24 ? covale ? covale2 B SG CYS 165 B CYS 380 1_555 D C1 MYR . B MYR 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.708 ? # _chem_comp.formula 'C14 H28 O2' _chem_comp.formula_weight 228.371 _chem_comp.id MYR _chem_comp.mon_nstd_flag . _chem_comp.name 'MYRISTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MYR doub 283 n n C1 O2 MYR sing 284 n n C1 C2 MYR sing 285 n n O2 HO2 MYR sing 286 n n C2 C3 MYR sing 287 n n C2 H21 MYR sing 288 n n C2 H22 MYR sing 289 n n C3 C4 MYR sing 290 n n C3 H31 MYR sing 291 n n C3 H32 MYR sing 292 n n C4 C5 MYR sing 293 n n C4 H41 MYR sing 294 n n C4 H42 MYR sing 295 n n C5 C6 MYR sing 296 n n C5 H51 MYR sing 297 n n C5 H52 MYR sing 298 n n C6 C7 MYR sing 299 n n C6 H61 MYR sing 300 n n C6 H62 MYR sing 301 n n C7 C8 MYR sing 302 n n C7 H71 MYR sing 303 n n C7 H72 MYR sing 304 n n C8 C9 MYR sing 305 n n C8 H81 MYR sing 306 n n C8 H82 MYR sing 307 n n C9 C10 MYR sing 308 n n C9 H91 MYR sing 309 n n C9 H92 MYR sing 310 n n C10 C11 MYR sing 311 n n C10 H101 MYR sing 312 n n C10 H102 MYR sing 313 n n C11 C12 MYR sing 314 n n C11 H111 MYR sing 315 n n C11 H112 MYR sing 316 n n C12 C13 MYR sing 317 n n C12 H121 MYR sing 318 n n C12 H122 MYR sing 319 n n C13 C14 MYR sing 320 n n C13 H131 MYR sing 321 n n C13 H132 MYR sing 322 n n C14 H141 MYR sing 323 n n C14 H142 MYR sing 324 n n C14 H143 MYR sing 325 n n # _atom_sites.entry_id 6S66 _atom_sites.fract_transf_matrix[1][1] 0.008194 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004243 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016242 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014073 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MYR A 1 501 501 MYR MYR . D 2 MYR B 1 501 501 MYR PLM . E 3 KWW B 1 502 1 KWW 369 . F 4 HOH A 1 601 16 HOH HOH . F 4 HOH A 2 602 124 HOH HOH . F 4 HOH A 3 603 96 HOH HOH . F 4 HOH A 4 604 4 HOH HOH . F 4 HOH A 5 605 88 HOH HOH . F 4 HOH A 6 606 27 HOH HOH . F 4 HOH A 7 607 2 HOH HOH . F 4 HOH A 8 608 48 HOH HOH . F 4 HOH A 9 609 51 HOH HOH . F 4 HOH A 10 610 108 HOH HOH . F 4 HOH A 11 611 23 HOH HOH . F 4 HOH A 12 612 20 HOH HOH . F 4 HOH A 13 613 12 HOH HOH . F 4 HOH A 14 614 101 HOH HOH . F 4 HOH A 15 615 21 HOH HOH . F 4 HOH A 16 616 5 HOH HOH . F 4 HOH A 17 617 29 HOH HOH . F 4 HOH A 18 618 26 HOH HOH . F 4 HOH A 19 619 38 HOH HOH . F 4 HOH A 20 620 99 HOH HOH . F 4 HOH A 21 621 39 HOH HOH . F 4 HOH A 22 622 47 HOH HOH . F 4 HOH A 23 623 125 HOH HOH . F 4 HOH A 24 624 28 HOH HOH . G 4 HOH B 1 601 69 HOH HOH . G 4 HOH B 2 602 95 HOH HOH . G 4 HOH B 3 603 6 HOH HOH . G 4 HOH B 4 604 8 HOH HOH . G 4 HOH B 5 605 56 HOH HOH . G 4 HOH B 6 606 42 HOH HOH . G 4 HOH B 7 607 70 HOH HOH . G 4 HOH B 8 608 72 HOH HOH . G 4 HOH B 9 609 61 HOH HOH . G 4 HOH B 10 610 10 HOH HOH . G 4 HOH B 11 611 60 HOH HOH . G 4 HOH B 12 612 59 HOH HOH . G 4 HOH B 13 613 13 HOH HOH . G 4 HOH B 14 614 80 HOH HOH . G 4 HOH B 15 615 58 HOH HOH . G 4 HOH B 16 616 79 HOH HOH . G 4 HOH B 17 617 81 HOH HOH . G 4 HOH B 18 618 65 HOH HOH . G 4 HOH B 19 619 74 HOH HOH . G 4 HOH B 20 620 3 HOH HOH . G 4 HOH B 21 621 63 HOH HOH . G 4 HOH B 22 622 62 HOH HOH . G 4 HOH B 23 623 112 HOH HOH . G 4 HOH B 24 624 128 HOH HOH . G 4 HOH B 25 625 78 HOH HOH . G 4 HOH B 26 626 11 HOH HOH . G 4 HOH B 27 627 113 HOH HOH . G 4 HOH B 28 628 126 HOH HOH . G 4 HOH B 29 629 55 HOH HOH . G 4 HOH B 30 630 71 HOH HOH . G 4 HOH B 31 631 67 HOH HOH . G 4 HOH B 32 632 127 HOH HOH . G 4 HOH B 33 633 73 HOH HOH . G 4 HOH B 34 634 119 HOH HOH . G 4 HOH B 35 635 120 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MYR . . . D 2 40.758 27.53 -18.236 1 70.84 ? C1 MYR 501 B 1 HETATM 2 O O1 MYR . . . D 2 40.121 27.208 -17.167 1 71.37 ? O1 MYR 501 B 1 HETATM 3 C C2 MYR . . . D 2 42.05 26.695 -18.253 1 63.01 ? C2 MYR 501 B 1 HETATM 4 C C3 MYR . . . D 2 42.29 25.694 -17.104 1 61.33 ? C3 MYR 501 B 1 HETATM 5 C C4 MYR . . . D 2 43.624 24.972 -17.277 1 62.08 ? C4 MYR 501 B 1 HETATM 6 C C5 MYR . . . D 2 43.552 23.473 -17.041 1 60.34 ? C5 MYR 501 B 1 HETATM 7 C C6 MYR . . . D 2 43.056 22.752 -18.268 1 59.19 ? C6 MYR 501 B 1 HETATM 8 C C7 MYR . . . D 2 43.349 21.263 -18.195 1 57.31 ? C7 MYR 501 B 1 HETATM 9 C C8 MYR . . . D 2 42.95 20.631 -19.512 1 56.43 ? C8 MYR 501 B 1 HETATM 10 C C9 MYR . . . D 2 42.858 19.142 -19.388 1 57.85 ? C9 MYR 501 B 1 HETATM 11 C C10 MYR . . . D 2 43.188 18.373 -20.622 1 58.55 ? C10 MYR 501 B 1 HETATM 12 C C11 MYR . . . D 2 42.554 18.921 -21.872 1 62.2 ? C11 MYR 501 B 1 HETATM 13 C C12 MYR . . . D 2 42.502 17.829 -22.946 1 60.84 ? C12 MYR 501 B 1 HETATM 14 C C13 MYR . . . D 2 43.202 18.29 -24.213 1 62.8 ? C13 MYR 501 B 1 HETATM 15 C C14 MYR . . . D 2 43.512 17.122 -25.139 1 55.06 ? C14 MYR 501 B 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 15 #