data_6S79 # _model_server_result.job_id eZbRaJswlRmM9atdVt5pUQ _model_server_result.datetime_utc '2024-11-07 16:06:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6s79 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":502}' # _entry.id 6S79 # _exptl.entry_id 6S79 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6S79 _cell.length_a 75.479 _cell.length_b 99.196 _cell.length_c 208.439 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6S79 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,J,K,N 1 1 B,C,F,G,H,I,L,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 I N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6S79 _atom_sites.fract_transf_matrix[1][1] 0.013249 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010081 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004798 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 KXW A 1 501 1 KXW 183 . F 2 KXW B 1 501 3 KXW 183 . G 3 GOL B 1 502 1 GOL GOL . H 2 KXW C 1 501 2 KXW 183 . I 3 GOL C 1 502 2 GOL GOL . J 2 KXW D 1 501 4 KXW 183 . K 4 HOH A 1 601 240 HOH HOH . K 4 HOH A 2 602 233 HOH HOH . K 4 HOH A 3 603 167 HOH HOH . K 4 HOH A 4 604 237 HOH HOH . K 4 HOH A 5 605 225 HOH HOH . K 4 HOH A 6 606 114 HOH HOH . K 4 HOH A 7 607 184 HOH HOH . K 4 HOH A 8 608 193 HOH HOH . K 4 HOH A 9 609 71 HOH HOH . K 4 HOH A 10 610 212 HOH HOH . K 4 HOH A 11 611 99 HOH HOH . K 4 HOH A 12 612 26 HOH HOH . K 4 HOH A 13 613 92 HOH HOH . K 4 HOH A 14 614 56 HOH HOH . K 4 HOH A 15 615 68 HOH HOH . K 4 HOH A 16 616 79 HOH HOH . K 4 HOH A 17 617 131 HOH HOH . K 4 HOH A 18 618 64 HOH HOH . K 4 HOH A 19 619 106 HOH HOH . K 4 HOH A 20 620 59 HOH HOH . K 4 HOH A 21 621 28 HOH HOH . K 4 HOH A 22 622 241 HOH HOH . K 4 HOH A 23 623 50 HOH HOH . K 4 HOH A 24 624 156 HOH HOH . K 4 HOH A 25 625 80 HOH HOH . K 4 HOH A 26 626 98 HOH HOH . K 4 HOH A 27 627 111 HOH HOH . K 4 HOH A 28 628 180 HOH HOH . K 4 HOH A 29 629 190 HOH HOH . K 4 HOH A 30 630 42 HOH HOH . K 4 HOH A 31 631 188 HOH HOH . K 4 HOH A 32 632 201 HOH HOH . K 4 HOH A 33 633 96 HOH HOH . K 4 HOH A 34 634 100 HOH HOH . K 4 HOH A 35 635 260 HOH HOH . K 4 HOH A 36 636 189 HOH HOH . K 4 HOH A 37 637 258 HOH HOH . L 4 HOH B 1 601 51 HOH HOH . L 4 HOH B 2 602 230 HOH HOH . L 4 HOH B 3 603 110 HOH HOH . L 4 HOH B 4 604 194 HOH HOH . L 4 HOH B 5 605 195 HOH HOH . L 4 HOH B 6 606 29 HOH HOH . L 4 HOH B 7 607 138 HOH HOH . L 4 HOH B 8 608 226 HOH HOH . L 4 HOH B 9 609 117 HOH HOH . L 4 HOH B 10 610 185 HOH HOH . L 4 HOH B 11 611 6 HOH HOH . L 4 HOH B 12 612 19 HOH HOH . L 4 HOH B 13 613 17 HOH HOH . L 4 HOH B 14 614 43 HOH HOH . L 4 HOH B 15 615 8 HOH HOH . L 4 HOH B 16 616 246 HOH HOH . L 4 HOH B 17 617 34 HOH HOH . L 4 HOH B 18 618 215 HOH HOH . L 4 HOH B 19 619 163 HOH HOH . L 4 HOH B 20 620 25 HOH HOH . L 4 HOH B 21 621 155 HOH HOH . L 4 HOH B 22 622 182 HOH HOH . L 4 HOH B 23 623 129 HOH HOH . L 4 HOH B 24 624 159 HOH HOH . L 4 HOH B 25 625 247 HOH HOH . L 4 HOH B 26 626 39 HOH HOH . L 4 HOH B 27 627 202 HOH HOH . L 4 HOH B 28 628 70 HOH HOH . L 4 HOH B 29 629 35 HOH HOH . L 4 HOH B 30 630 124 HOH HOH . L 4 HOH B 31 631 62 HOH HOH . L 4 HOH B 32 632 186 HOH HOH . L 4 HOH B 33 633 38 HOH HOH . L 4 HOH B 34 634 65 HOH HOH . L 4 HOH B 35 635 199 HOH HOH . L 4 HOH B 36 636 150 HOH HOH . L 4 HOH B 37 637 262 HOH HOH . L 4 HOH B 38 638 11 HOH HOH . L 4 HOH B 39 639 115 HOH HOH . L 4 HOH B 40 640 4 HOH HOH . L 4 HOH B 41 641 104 HOH HOH . L 4 HOH B 42 642 60 HOH HOH . L 4 HOH B 43 643 218 HOH HOH . L 4 HOH B 44 644 170 HOH HOH . L 4 HOH B 45 645 30 HOH HOH . L 4 HOH B 46 646 33 HOH HOH . L 4 HOH B 47 647 123 HOH HOH . L 4 HOH B 48 648 67 HOH HOH . L 4 HOH B 49 649 197 HOH HOH . L 4 HOH B 50 650 84 HOH HOH . L 4 HOH B 51 651 95 HOH HOH . L 4 HOH B 52 652 75 HOH HOH . L 4 HOH B 53 653 164 HOH HOH . L 4 HOH B 54 654 178 HOH HOH . L 4 HOH B 55 655 239 HOH HOH . L 4 HOH B 56 656 83 HOH HOH . L 4 HOH B 57 657 141 HOH HOH . L 4 HOH B 58 658 86 HOH HOH . L 4 HOH B 59 659 162 HOH HOH . L 4 HOH B 60 660 90 HOH HOH . L 4 HOH B 61 661 14 HOH HOH . L 4 HOH B 62 662 101 HOH HOH . L 4 HOH B 63 663 20 HOH HOH . L 4 HOH B 64 664 136 HOH HOH . L 4 HOH B 65 665 177 HOH HOH . L 4 HOH B 66 666 154 HOH HOH . L 4 HOH B 67 667 248 HOH HOH . L 4 HOH B 68 668 261 HOH HOH . L 4 HOH B 69 669 214 HOH HOH . L 4 HOH B 70 670 37 HOH HOH . L 4 HOH B 71 671 140 HOH HOH . L 4 HOH B 72 672 257 HOH HOH . L 4 HOH B 73 673 252 HOH HOH . L 4 HOH B 74 674 222 HOH HOH . L 4 HOH B 75 675 224 HOH HOH . L 4 HOH B 76 676 157 HOH HOH . L 4 HOH B 77 677 264 HOH HOH . L 4 HOH B 78 678 255 HOH HOH . L 4 HOH B 79 679 235 HOH HOH . M 4 HOH C 1 601 2 HOH HOH . M 4 HOH C 2 602 234 HOH HOH . M 4 HOH C 3 603 243 HOH HOH . M 4 HOH C 4 604 242 HOH HOH . M 4 HOH C 5 605 22 HOH HOH . M 4 HOH C 6 606 69 HOH HOH . M 4 HOH C 7 607 23 HOH HOH . M 4 HOH C 8 608 127 HOH HOH . M 4 HOH C 9 609 168 HOH HOH . M 4 HOH C 10 610 46 HOH HOH . M 4 HOH C 11 611 254 HOH HOH . M 4 HOH C 12 612 27 HOH HOH . M 4 HOH C 13 613 1 HOH HOH . M 4 HOH C 14 614 250 HOH HOH . M 4 HOH C 15 615 91 HOH HOH . M 4 HOH C 16 616 94 HOH HOH . M 4 HOH C 17 617 137 HOH HOH . M 4 HOH C 18 618 53 HOH HOH . M 4 HOH C 19 619 169 HOH HOH . M 4 HOH C 20 620 21 HOH HOH . M 4 HOH C 21 621 13 HOH HOH . M 4 HOH C 22 622 93 HOH HOH . M 4 HOH C 23 623 173 HOH HOH . M 4 HOH C 24 624 12 HOH HOH . M 4 HOH C 25 625 49 HOH HOH . M 4 HOH C 26 626 18 HOH HOH . M 4 HOH C 27 627 44 HOH HOH . M 4 HOH C 28 628 121 HOH HOH . M 4 HOH C 29 629 176 HOH HOH . M 4 HOH C 30 630 81 HOH HOH . M 4 HOH C 31 631 76 HOH HOH . M 4 HOH C 32 632 267 HOH HOH . M 4 HOH C 33 633 125 HOH HOH . M 4 HOH C 34 634 126 HOH HOH . M 4 HOH C 35 635 107 HOH HOH . M 4 HOH C 36 636 55 HOH HOH . M 4 HOH C 37 637 63 HOH HOH . M 4 HOH C 38 638 9 HOH HOH . M 4 HOH C 39 639 74 HOH HOH . M 4 HOH C 40 640 7 HOH HOH . M 4 HOH C 41 641 238 HOH HOH . M 4 HOH C 42 642 88 HOH HOH . M 4 HOH C 43 643 210 HOH HOH . M 4 HOH C 44 644 3 HOH HOH . M 4 HOH C 45 645 89 HOH HOH . M 4 HOH C 46 646 40 HOH HOH . M 4 HOH C 47 647 58 HOH HOH . M 4 HOH C 48 648 85 HOH HOH . M 4 HOH C 49 649 139 HOH HOH . M 4 HOH C 50 650 145 HOH HOH . M 4 HOH C 51 651 133 HOH HOH . M 4 HOH C 52 652 32 HOH HOH . M 4 HOH C 53 653 172 HOH HOH . M 4 HOH C 54 654 147 HOH HOH . M 4 HOH C 55 655 5 HOH HOH . M 4 HOH C 56 656 132 HOH HOH . M 4 HOH C 57 657 181 HOH HOH . M 4 HOH C 58 658 24 HOH HOH . M 4 HOH C 59 659 15 HOH HOH . M 4 HOH C 60 660 263 HOH HOH . M 4 HOH C 61 661 148 HOH HOH . M 4 HOH C 62 662 220 HOH HOH . M 4 HOH C 63 663 10 HOH HOH . M 4 HOH C 64 664 144 HOH HOH . M 4 HOH C 65 665 54 HOH HOH . M 4 HOH C 66 666 66 HOH HOH . M 4 HOH C 67 667 41 HOH HOH . M 4 HOH C 68 668 198 HOH HOH . M 4 HOH C 69 669 161 HOH HOH . M 4 HOH C 70 670 105 HOH HOH . M 4 HOH C 71 671 72 HOH HOH . M 4 HOH C 72 672 152 HOH HOH . M 4 HOH C 73 673 119 HOH HOH . M 4 HOH C 74 674 52 HOH HOH . M 4 HOH C 75 675 192 HOH HOH . M 4 HOH C 76 676 151 HOH HOH . M 4 HOH C 77 677 78 HOH HOH . M 4 HOH C 78 678 97 HOH HOH . M 4 HOH C 79 679 245 HOH HOH . M 4 HOH C 80 680 122 HOH HOH . M 4 HOH C 81 681 219 HOH HOH . M 4 HOH C 82 682 208 HOH HOH . M 4 HOH C 83 683 61 HOH HOH . M 4 HOH C 84 684 135 HOH HOH . M 4 HOH C 85 685 82 HOH HOH . M 4 HOH C 86 686 166 HOH HOH . M 4 HOH C 87 687 77 HOH HOH . M 4 HOH C 88 688 216 HOH HOH . M 4 HOH C 89 689 175 HOH HOH . M 4 HOH C 90 690 31 HOH HOH . M 4 HOH C 91 691 179 HOH HOH . M 4 HOH C 92 692 118 HOH HOH . M 4 HOH C 93 693 149 HOH HOH . M 4 HOH C 94 694 196 HOH HOH . M 4 HOH C 95 695 134 HOH HOH . M 4 HOH C 96 696 142 HOH HOH . M 4 HOH C 97 697 45 HOH HOH . M 4 HOH C 98 698 223 HOH HOH . M 4 HOH C 99 699 206 HOH HOH . M 4 HOH C 100 700 227 HOH HOH . M 4 HOH C 101 701 108 HOH HOH . M 4 HOH C 102 702 128 HOH HOH . M 4 HOH C 103 703 158 HOH HOH . M 4 HOH C 104 704 209 HOH HOH . M 4 HOH C 105 705 205 HOH HOH . M 4 HOH C 106 706 48 HOH HOH . M 4 HOH C 107 707 207 HOH HOH . M 4 HOH C 108 708 259 HOH HOH . M 4 HOH C 109 709 203 HOH HOH . M 4 HOH C 110 710 102 HOH HOH . M 4 HOH C 111 711 221 HOH HOH . M 4 HOH C 112 712 266 HOH HOH . M 4 HOH C 113 713 204 HOH HOH . M 4 HOH C 114 714 251 HOH HOH . M 4 HOH C 115 715 253 HOH HOH . M 4 HOH C 116 716 265 HOH HOH . M 4 HOH C 117 717 146 HOH HOH . N 4 HOH D 1 601 229 HOH HOH . N 4 HOH D 2 602 232 HOH HOH . N 4 HOH D 3 603 244 HOH HOH . N 4 HOH D 4 604 47 HOH HOH . N 4 HOH D 5 605 112 HOH HOH . N 4 HOH D 6 606 113 HOH HOH . N 4 HOH D 7 607 183 HOH HOH . N 4 HOH D 8 608 200 HOH HOH . N 4 HOH D 9 609 174 HOH HOH . N 4 HOH D 10 610 130 HOH HOH . N 4 HOH D 11 611 16 HOH HOH . N 4 HOH D 12 612 36 HOH HOH . N 4 HOH D 13 613 187 HOH HOH . N 4 HOH D 14 614 171 HOH HOH . N 4 HOH D 15 615 87 HOH HOH . N 4 HOH D 16 616 153 HOH HOH . N 4 HOH D 17 617 160 HOH HOH . N 4 HOH D 18 618 249 HOH HOH . N 4 HOH D 19 619 103 HOH HOH . N 4 HOH D 20 620 231 HOH HOH . N 4 HOH D 21 621 57 HOH HOH . N 4 HOH D 22 622 109 HOH HOH . N 4 HOH D 23 623 73 HOH HOH . N 4 HOH D 24 624 191 HOH HOH . N 4 HOH D 25 625 236 HOH HOH . N 4 HOH D 26 626 165 HOH HOH . N 4 HOH D 27 627 116 HOH HOH . N 4 HOH D 28 628 120 HOH HOH . N 4 HOH D 29 629 143 HOH HOH . N 4 HOH D 30 630 217 HOH HOH . N 4 HOH D 31 631 213 HOH HOH . N 4 HOH D 32 632 211 HOH HOH . N 4 HOH D 33 633 228 HOH HOH . N 4 HOH D 34 634 256 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . I 3 -4.055 21.998 -75.484 1 64.89 ? C1 GOL 502 C 1 HETATM 2 O O1 GOL . . . I 3 -5.285 21.945 -76.216 1 59.47 ? O1 GOL 502 C 1 HETATM 3 C C2 GOL . . . I 3 -3.026 22.789 -76.267 1 69.09 ? C2 GOL 502 C 1 HETATM 4 O O2 GOL . . . I 3 -3.194 22.681 -77.699 1 63.69 ? O2 GOL 502 C 1 HETATM 5 C C3 GOL . . . I 3 -1.604 22.343 -75.886 1 76.72 ? C3 GOL 502 C 1 HETATM 6 O O3 GOL . . . I 3 -0.682 22.764 -76.922 1 76.94 ? O3 GOL 502 C 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #