data_6S89 # _model_server_result.job_id xijcf9d-JPlA3eRu5yASDw _model_server_result.datetime_utc '2025-06-29 22:32:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6s89 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 6S89 # _exptl.entry_id 6S89 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 498.619 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[3-[6-[4-(4-methylpiperazin-1-yl)phenyl]-4-propan-2-yloxy-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl]phenyl]propanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6S89 _cell.length_a 143.83 _cell.length_b 143.83 _cell.length_c 143.83 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6S89 _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H34 N6 O2' _chem_comp.formula_weight 498.619 _chem_comp.id L0Q _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[3-[6-[4-(4-methylpiperazin-1-yl)phenyl]-4-propan-2-yloxy-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl]phenyl]propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAN CAM L0Q sing 171 n n CAO CAM L0Q sing 172 n n CAM OAL L0Q sing 173 n n CBB CBC L0Q sing 174 n n CBB CBA L0Q sing 175 n n N1 C2 L0Q doub 176 n y N1 C6 L0Q sing 177 n y OAL C6 L0Q sing 178 n n OBK CBA L0Q doub 179 n n CBA NAZ L0Q sing 180 n n C2 N3 L0Q sing 181 n y C6 C5 L0Q doub 182 n y NAZ CAV L0Q sing 183 n n CAV CAU L0Q doub 184 n y CAV CAW L0Q sing 185 n y N3 C4 L0Q doub 186 n y CAU CAK L0Q sing 187 n y C5 C4 L0Q sing 188 n y C5 CAI L0Q sing 189 n y CAW CAX L0Q doub 190 n y C4 NAG L0Q sing 191 n y CAK CAI L0Q sing 192 n n CAK CAY L0Q doub 193 n y CAI CAH L0Q doub 194 n y CAX CAY L0Q sing 195 n y NAG CAH L0Q sing 196 n y CAH CAJ L0Q sing 197 n n CAJ CAP L0Q doub 198 n y CAJ CAT L0Q sing 199 n y CAP CAQ L0Q sing 200 n y CAT CAS L0Q doub 201 n y CAQ CAR L0Q doub 202 n y CAS CAR L0Q sing 203 n y CAR NBD L0Q sing 204 n n NBD CBE L0Q sing 205 n n NBD CBF L0Q sing 206 n n CBE CBG L0Q sing 207 n n CBF CBI L0Q sing 208 n n CBG NBH L0Q sing 209 n n CBI NBH L0Q sing 210 n n NBH CBJ L0Q sing 211 n n CBE H1 L0Q sing 212 n n CBE H2 L0Q sing 213 n n CBG H3 L0Q sing 214 n n CBG H4 L0Q sing 215 n n CBJ H6 L0Q sing 216 n n CBJ H7 L0Q sing 217 n n CBJ H8 L0Q sing 218 n n CBI H9 L0Q sing 219 n n CBI H10 L0Q sing 220 n n CBF H11 L0Q sing 221 n n CBF H12 L0Q sing 222 n n CAS H13 L0Q sing 223 n n CAT H14 L0Q sing 224 n n CAQ H15 L0Q sing 225 n n CAP H16 L0Q sing 226 n n NAG H17 L0Q sing 227 n n C2 H18 L0Q sing 228 n n CAM H19 L0Q sing 229 n n CAO H20 L0Q sing 230 n n CAO H21 L0Q sing 231 n n CAO H22 L0Q sing 232 n n CAN H23 L0Q sing 233 n n CAN H24 L0Q sing 234 n n CAN H25 L0Q sing 235 n n CAU H26 L0Q sing 236 n n CAY H27 L0Q sing 237 n n CAX H28 L0Q sing 238 n n CAW H29 L0Q sing 239 n n NAZ H30 L0Q sing 240 n n CBB H31 L0Q sing 241 n n CBB H32 L0Q sing 242 n n CBC H33 L0Q sing 243 n n CBC H34 L0Q sing 244 n n CBC H35 L0Q sing 245 n n # _atom_sites.entry_id 6S89 _atom_sites.fract_transf_matrix[1][1] 0.006953 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006953 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006953 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 L0Q A 1 1101 1101 L0Q DRG . C 3 MES A 1 1102 1201 MES MES . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 L0Q . . . B 2 2.155 52.006 -21.156 1 71.07 ? C4 L0Q 1101 A 1 HETATM 2 C C5 L0Q . . . B 2 1.728 50.876 -21.77 1 74.91 ? C5 L0Q 1101 A 1 HETATM 3 C C6 L0Q . . . B 2 1.751 50.84 -23.115 1 72.46 ? C6 L0Q 1101 A 1 HETATM 4 N N1 L0Q . . . B 2 2.169 51.89 -23.84 1 77.73 ? N1 L0Q 1101 A 1 HETATM 5 N N3 L0Q . . . B 2 2.58 53.086 -21.831 1 66.56 ? N3 L0Q 1101 A 1 HETATM 6 C CBE L0Q . . . B 2 -0.348 48.258 -14.104 1 105.92 ? CBE L0Q 1101 A 1 HETATM 7 C CBG L0Q . . . B 2 -0.896 48.543 -12.719 1 111.48 ? CBG L0Q 1101 A 1 HETATM 8 N NBH L0Q . . . B 2 0.202 48.486 -11.729 1 118.83 ? NBH L0Q 1101 A 1 HETATM 9 C CBJ L0Q . . . B 2 -0.315 48.68 -10.362 1 113.39 ? CBJ L0Q 1101 A 1 HETATM 10 C CBI L0Q . . . B 2 1.283 49.456 -12.041 1 113.09 ? CBI L0Q 1101 A 1 HETATM 11 C CBF L0Q . . . B 2 1.849 49.205 -13.441 1 109.2 ? CBF L0Q 1101 A 1 HETATM 12 N NBD L0Q . . . B 2 0.715 49.243 -14.386 1 106.81 ? NBD L0Q 1101 A 1 HETATM 13 C CAR L0Q . . . B 2 0.935 49.555 -15.676 1 96.23 ? CAR L0Q 1101 A 1 HETATM 14 C CAS L0Q . . . B 2 1.942 50.456 -16.025 1 84.96 ? CAS L0Q 1101 A 1 HETATM 15 C CAT L0Q . . . B 2 2.148 50.805 -17.352 1 74.28 ? CAT L0Q 1101 A 1 HETATM 16 C CAQ L0Q . . . B 2 0.123 49.002 -16.666 1 76.56 ? CAQ L0Q 1101 A 1 HETATM 17 C CAP L0Q . . . B 2 0.339 49.359 -17.989 1 73.93 ? CAP L0Q 1101 A 1 HETATM 18 C CAJ L0Q . . . B 2 1.366 50.237 -18.349 1 77.08 ? CAJ L0Q 1101 A 1 HETATM 19 C CAH L0Q . . . B 2 1.583 50.621 -19.618 1 76.34 ? CAH L0Q 1101 A 1 HETATM 20 N NAG L0Q . . . B 2 2.061 51.841 -19.845 1 68.62 ? NAG L0Q 1101 A 1 HETATM 21 C C2 L0Q . . . B 2 2.601 53.06 -23.218 1 72.77 ? C2 L0Q 1101 A 1 HETATM 22 O OAL L0Q . . . B 2 1.333 49.702 -23.752 1 81.99 ? OAL L0Q 1101 A 1 HETATM 23 C CAM L0Q . . . B 2 1.318 49.85 -25.202 1 79.19 ? CAM L0Q 1101 A 1 HETATM 24 C CAO L0Q . . . B 2 2.745 49.72 -25.77 1 75.59 ? CAO L0Q 1101 A 1 HETATM 25 C CAN L0Q . . . B 2 0.415 48.786 -25.847 1 75.39 ? CAN L0Q 1101 A 1 HETATM 26 C CAI L0Q . . . B 2 1.343 50.004 -20.8 1 74.17 ? CAI L0Q 1101 A 1 HETATM 27 C CAK L0Q . . . B 2 0.902 48.726 -20.962 1 71.16 ? CAK L0Q 1101 A 1 HETATM 28 C CAU L0Q . . . B 2 -0.156 48.316 -21.795 1 79.86 ? CAU L0Q 1101 A 1 HETATM 29 C CAY L0Q . . . B 2 1.583 47.726 -20.263 1 82.67 ? CAY L0Q 1101 A 1 HETATM 30 C CAX L0Q . . . B 2 1.223 46.382 -20.363 1 89.57 ? CAX L0Q 1101 A 1 HETATM 31 C CAW L0Q . . . B 2 0.171 45.997 -21.189 1 81.81 ? CAW L0Q 1101 A 1 HETATM 32 C CAV L0Q . . . B 2 -0.528 46.954 -21.918 1 84.68 ? CAV L0Q 1101 A 1 HETATM 33 N NAZ L0Q . . . B 2 -1.546 46.478 -22.677 1 96.49 ? NAZ L0Q 1101 A 1 HETATM 34 C CBA L0Q . . . B 2 -2.471 47.264 -23.305 1 110.45 ? CBA L0Q 1101 A 1 HETATM 35 O OBK L0Q . . . B 2 -2.506 48.503 -23.32 1 117.82 ? OBK L0Q 1101 A 1 HETATM 36 C CBB L0Q . . . B 2 -3.548 46.458 -24.057 1 101.52 ? CBB L0Q 1101 A 1 HETATM 37 C CBC L0Q . . . B 2 -3.5 44.948 -23.822 1 90.68 ? CBC L0Q 1101 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 37 #