data_6S8H # _model_server_result.job_id Nf7TL68_obo6cjTBeQXhZQ _model_server_result.datetime_utc '2024-11-12 20:46:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6s8h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":402}' # _entry.id 6S8H # _exptl.entry_id 6S8H _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 510.615 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6S8H _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6S8H _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 H N N ? 7 J N N # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 851 n n C1B O1B LMT sing 852 n n C1B O5B LMT sing 853 n n C1B H1B LMT sing 854 n n C2B C3B LMT sing 855 n n C2B O2B LMT sing 856 n n C2B H2B LMT sing 857 n n C3B C4B LMT sing 858 n n C3B O3B LMT sing 859 n n C3B H3B LMT sing 860 n n C4B C5B LMT sing 861 n n C4B O4' LMT sing 862 n n C4B H4B LMT sing 863 n n C5B C6B LMT sing 864 n n C5B O5B LMT sing 865 n n C5B H5B LMT sing 866 n n C6B O6B LMT sing 867 n n C6B "H6'2" LMT sing 868 n n C6B "H6'1" LMT sing 869 n n O1B C4' LMT sing 870 n n O2B H2O1 LMT sing 871 n n O3B H3O1 LMT sing 872 n n O4' H4O1 LMT sing 873 n n O6B H6B LMT sing 874 n n C1' C2' LMT sing 875 n n C1' O1' LMT sing 876 n n C1' O5' LMT sing 877 n n C1' H1' LMT sing 878 n n C2' C3' LMT sing 879 n n C2' O2' LMT sing 880 n n C2' H2' LMT sing 881 n n C3' C4' LMT sing 882 n n C3' O3' LMT sing 883 n n C3' H3' LMT sing 884 n n C4' C5' LMT sing 885 n n C4' H4' LMT sing 886 n n C5' C6' LMT sing 887 n n C5' O5' LMT sing 888 n n C5' H5' LMT sing 889 n n C6' O6' LMT sing 890 n n C6' H6D LMT sing 891 n n C6' H6E LMT sing 892 n n O1' C1 LMT sing 893 n n O2' H2O2 LMT sing 894 n n O3' H3O2 LMT sing 895 n n O6' H6' LMT sing 896 n n C1 C2 LMT sing 897 n n C1 H12 LMT sing 898 n n C1 H11 LMT sing 899 n n C2 C3 LMT sing 900 n n C2 H22 LMT sing 901 n n C2 H21 LMT sing 902 n n C3 C4 LMT sing 903 n n C3 H32 LMT sing 904 n n C3 H31 LMT sing 905 n n C4 C5 LMT sing 906 n n C4 H42 LMT sing 907 n n C4 H41 LMT sing 908 n n C5 C6 LMT sing 909 n n C5 H52 LMT sing 910 n n C5 H51 LMT sing 911 n n C6 C7 LMT sing 912 n n C6 H62 LMT sing 913 n n C6 H61 LMT sing 914 n n C7 C8 LMT sing 915 n n C7 H72 LMT sing 916 n n C7 H71 LMT sing 917 n n C8 C9 LMT sing 918 n n C8 H82 LMT sing 919 n n C8 H81 LMT sing 920 n n C9 C10 LMT sing 921 n n C9 H92 LMT sing 922 n n C9 H91 LMT sing 923 n n C10 C11 LMT sing 924 n n C10 H102 LMT sing 925 n n C10 H101 LMT sing 926 n n C11 C12 LMT sing 927 n n C11 H112 LMT sing 928 n n C11 H111 LMT sing 929 n n C12 H123 LMT sing 930 n n C12 H122 LMT sing 931 n n C12 H121 LMT sing 932 n n # _atom_sites.entry_id 6S8H _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 LMN F 1 401 402 LMN LMN . F 5 JSG F 1 402 401 JSG DRG . G 6 DCQ F 1 403 502 DCQ DCQ . H 7 LMT F 1 404 503 LMT LMT . I 4 LMN G 1 401 401 LMN LMN . J 7 LMT G 1 402 501 LMT LMT . K 6 DCQ G 1 403 504 DCQ DCQ . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1' LMT . . . J 7 77.125 80.642 90.599 1 81.15 ? C1' LMT 402 G 1 HETATM 2 O O1' LMT . . . J 7 77.944 79.554 90.675 1 81.15 ? O1' LMT 402 G 1 HETATM 3 C C1 LMT . . . J 7 77.948 78.742 89.525 1 81.15 ? C1 LMT 402 G 1 HETATM 4 C C2 LMT . . . J 7 79.392 78.42 89.293 1 81.15 ? C2 LMT 402 G 1 HETATM 5 C C3 LMT . . . J 7 79.684 77.483 88.169 1 81.15 ? C3 LMT 402 G 1 HETATM 6 C C4 LMT . . . J 7 80.26 78.303 87.05 1 81.15 ? C4 LMT 402 G 1 HETATM 7 C C5 LMT . . . J 7 81.748 78.291 87.081 1 81.15 ? C5 LMT 402 G 1 HETATM 8 C C6 LMT . . . J 7 82.322 78.069 85.723 1 81.15 ? C6 LMT 402 G 1 HETATM 9 C C7 LMT . . . J 7 83.81 78.218 85.775 1 81.15 ? C7 LMT 402 G 1 HETATM 10 C C8 LMT . . . J 7 84.378 77.786 84.473 1 81.15 ? C8 LMT 402 G 1 HETATM 11 C C9 LMT . . . J 7 85.249 78.804 83.82 1 81.15 ? C9 LMT 402 G 1 HETATM 12 C C10 LMT . . . J 7 86.307 78.057 83.064 1 81.15 ? C10 LMT 402 G 1 HETATM 13 C C11 LMT . . . J 7 87.132 78.974 82.226 1 81.15 ? C11 LMT 402 G 1 HETATM 14 C C12 LMT . . . J 7 88.131 78.22 81.418 1 81.15 ? C12 LMT 402 G 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 14 #