# Name: GDP # Created by ModelServer 0.9.12 # model_server_result.job_id: dcO5GExjB18LnCCaRCQU7A # model_server_result.datetime_utc: 2025-07-03 07:40:44 # model_server_result.server_version: 0.9.12 # model_server_result.query_name: ligand # model_server_result.source_id: pdb-bcif # model_server_result.entry_id: 6s8k # model_server_params.name: atom_site # model_server_params.value: {"label_asym_id":"G","auth_seq_id":502} # model_server_stats.io_time_ms: 149 # model_server_stats.parse_time_ms: 21 # model_server_stats.create_model_time_ms: 26 # model_server_stats.query_time_ms: 331 # model_server_stats.encode_time_ms: 0 # model_server_stats.element_count: 40 @MOLECULE GDP 40 42 1 **** **** @ATOM 1 PB 4.495 -9.801 51.336 P.3 1 GDP 0.000 2 O1B 5.379 -9.134 50.294 O.2 1 GDP 0.000 3 O2B 5.093 -11.098 51.822 O.3 1 GDP 0.000 4 O3B 4.190 -8.838 52.437 O.3 1 GDP 0.000 5 O3A 3.062 -10.144 50.639 O.3 1 GDP 0.000 6 PA 2.850 -10.968 49.254 P.3 1 GDP 0.000 7 O1A 4.143 -11.157 48.482 O.2 1 GDP 0.000 8 O2A 2.182 -12.300 49.513 O.3 1 GDP 0.000 9 O5' 1.840 -9.946 48.449 O.3 1 GDP 0.000 10 C5' 0.567 -10.391 48.064 C.3 1 GDP 0.000 11 C4' 0.453 -10.142 46.596 C.3 1 GDP 0.000 12 O4' 1.351 -10.805 45.867 O.3 1 GDP 0.000 13 C3' -1.014 -10.637 45.958 C.3 1 GDP 0.000 14 O3' -1.248 -9.708 44.829 O.3 1 GDP 0.000 15 C2' -0.818 -11.836 45.700 C.3 1 GDP 0.000 16 O2' -1.754 -12.229 44.616 O.3 1 GDP 0.000 17 C1' 0.681 -11.958 45.144 C.3 1 GDP 0.000 18 N9 1.373 -13.035 45.401 N.ar 1 GDP 0.000 19 C8 1.827 -13.645 46.503 C.ar 1 GDP 0.000 20 N7 2.531 -14.715 46.107 N.ar 1 GDP 0.000 21 C5 2.548 -14.752 44.779 C.ar 1 GDP 0.000 22 C6 3.191 -15.727 43.781 C.2 1 GDP 0.000 23 O6 3.830 -16.666 44.137 O.2 1 GDP 0.000 24 N1 3.038 -15.512 42.384 N.am 1 GDP 0.000 25 C2 2.273 -14.387 41.919 C.cat 1 GDP 0.000 26 N2 2.115 -14.172 40.506 N.pl3 1 GDP 0.000 27 N3 1.668 -13.467 42.872 N.2 1 GDP 0.000 28 C4 1.822 -13.681 44.337 C.ar 1 GDP 0.000 29 H5' 0.474 -11.339 48.251 H 1 GDP 0.000 30 H5'' -0.118 -9.898 48.541 H 1 GDP 0.000 31 H4' 0.572 -9.186 46.483 H 1 GDP 0.000 32 H3' -1.797 -10.632 46.531 H 1 GDP 0.000 33 HO3' -1.498 -8.954 45.131 H 1 GDP 0.000 34 H2' -0.911 -12.370 46.504 H 1 GDP 0.000 35 HO2' -2.554 -12.164 44.896 H 1 GDP 0.000 36 H1' 0.615 -11.921 44.177 H 1 GDP 0.000 37 H8 1.681 -13.375 47.381 H 1 GDP 0.000 38 HN1 3.400 -16.052 41.821 H 1 GDP 0.000 39 HN21 2.474 -14.715 39.945 H 1 GDP 0.000 40 HN22 1.663 -13.496 40.223 H 1 GDP 0.000 @BOND 1 1 2 2 2 1 3 1 3 1 4 1 4 1 5 1 5 5 6 1 6 6 7 2 7 6 8 1 8 6 9 1 9 9 10 1 10 10 11 1 11 10 29 1 12 10 30 1 13 11 12 1 14 11 13 1 15 11 31 1 16 12 17 1 17 13 14 1 18 13 15 1 19 13 32 1 20 14 33 1 21 15 16 1 22 15 17 1 23 15 34 1 24 16 35 1 25 17 18 1 26 17 36 1 27 18 19 ar 28 18 28 ar 29 19 20 ar 30 19 37 1 31 20 21 ar 32 21 22 1 33 21 28 ar 34 22 23 2 35 22 24 1 36 24 25 1 37 24 38 1 38 25 26 1 39 25 27 2 40 26 39 1 41 26 40 1 42 27 28 1 @SUBSTRUCTURE 1 GDP 1