data_6S8W # _model_server_result.job_id gy27_HOajIwMWjZfhXvRsA _model_server_result.datetime_utc '2024-11-28 12:34:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6s8w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":602}' # _entry.id 6S8W # _exptl.entry_id 6S8W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 84.77 _cell.angle_beta 87.51 _cell.angle_gamma 65.37 _cell.entry_id 6S8W _cell.length_a 64.209 _cell.length_b 75.26 _cell.length_c 121.631 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6S8W _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,K,L 1 1 C,D,H,I,J,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 348 A LYS 348 1_555 E C4A PLP . A PLP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.275 ? covale ? covale2 B NZ LYS 348 B LYS 348 1_555 G C4A PLP . B PLP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.272 ? covale ? covale3 C NZ LYS 348 C LYS 348 1_555 H C4A PLP . C PLP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.27 ? covale ? covale4 D NZ LYS 348 D LYS 348 1_555 J C4A PLP . D PLP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.277 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 83 n n C O2 FMT sing 84 n n C H FMT sing 85 n n O2 HO2 FMT sing 86 n n # _atom_sites.entry_id 6S8W _atom_sites.fract_transf_matrix[1][1] 0.015574 _atom_sites.fract_transf_matrix[1][2] -0.007141 _atom_sites.fract_transf_matrix[1][3] -0.000104 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014617 _atom_sites.fract_transf_matrix[2][3] -0.001179 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008256 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PLP A 1 601 348 PLP LLP . F 3 FMT A 1 602 601 FMT FMT . G 2 PLP B 1 601 348 PLP LLP . H 2 PLP C 1 601 348 PLP LLP . I 3 FMT D 1 601 601 FMT FMT . J 2 PLP D 1 602 348 PLP LLP . K 4 HOH A 1 701 7 HOH HOH . K 4 HOH A 2 702 112 HOH HOH . K 4 HOH A 3 703 160 HOH HOH . K 4 HOH A 4 704 118 HOH HOH . K 4 HOH A 5 705 179 HOH HOH . K 4 HOH A 6 706 12 HOH HOH . K 4 HOH A 7 707 88 HOH HOH . K 4 HOH A 8 708 90 HOH HOH . K 4 HOH A 9 709 91 HOH HOH . K 4 HOH A 10 710 147 HOH HOH . K 4 HOH A 11 711 134 HOH HOH . K 4 HOH A 12 712 140 HOH HOH . K 4 HOH A 13 713 139 HOH HOH . K 4 HOH A 14 714 148 HOH HOH . K 4 HOH A 15 715 168 HOH HOH . K 4 HOH A 16 716 143 HOH HOH . K 4 HOH A 17 717 26 HOH HOH . K 4 HOH A 18 718 75 HOH HOH . K 4 HOH A 19 719 178 HOH HOH . K 4 HOH A 20 720 169 HOH HOH . K 4 HOH A 21 721 32 HOH HOH . K 4 HOH A 22 722 56 HOH HOH . K 4 HOH A 23 723 52 HOH HOH . K 4 HOH A 24 724 33 HOH HOH . K 4 HOH A 25 725 4 HOH HOH . K 4 HOH A 26 726 62 HOH HOH . K 4 HOH A 27 727 13 HOH HOH . K 4 HOH A 28 728 99 HOH HOH . K 4 HOH A 29 729 157 HOH HOH . K 4 HOH A 30 730 31 HOH HOH . K 4 HOH A 31 731 124 HOH HOH . K 4 HOH A 32 732 8 HOH HOH . K 4 HOH A 33 733 180 HOH HOH . K 4 HOH A 34 734 135 HOH HOH . K 4 HOH A 35 735 9 HOH HOH . K 4 HOH A 36 736 51 HOH HOH . K 4 HOH A 37 737 115 HOH HOH . K 4 HOH A 38 738 44 HOH HOH . K 4 HOH A 39 739 58 HOH HOH . K 4 HOH A 40 740 177 HOH HOH . K 4 HOH A 41 741 76 HOH HOH . K 4 HOH A 42 742 38 HOH HOH . K 4 HOH A 43 743 117 HOH HOH . K 4 HOH A 44 744 86 HOH HOH . K 4 HOH A 45 745 127 HOH HOH . K 4 HOH A 46 746 63 HOH HOH . K 4 HOH A 47 747 10 HOH HOH . K 4 HOH A 48 748 37 HOH HOH . K 4 HOH A 49 749 163 HOH HOH . K 4 HOH A 50 750 98 HOH HOH . K 4 HOH A 51 751 60 HOH HOH . K 4 HOH A 52 752 170 HOH HOH . K 4 HOH A 53 753 73 HOH HOH . K 4 HOH A 54 754 59 HOH HOH . K 4 HOH A 55 755 24 HOH HOH . L 4 HOH B 1 701 171 HOH HOH . L 4 HOH B 2 702 181 HOH HOH . L 4 HOH B 3 703 103 HOH HOH . L 4 HOH B 4 704 6 HOH HOH . L 4 HOH B 5 705 82 HOH HOH . L 4 HOH B 6 706 64 HOH HOH . L 4 HOH B 7 707 87 HOH HOH . L 4 HOH B 8 708 19 HOH HOH . L 4 HOH B 9 709 28 HOH HOH . L 4 HOH B 10 710 130 HOH HOH . L 4 HOH B 11 711 68 HOH HOH . L 4 HOH B 12 712 40 HOH HOH . L 4 HOH B 13 713 69 HOH HOH . L 4 HOH B 14 714 150 HOH HOH . L 4 HOH B 15 715 55 HOH HOH . L 4 HOH B 16 716 166 HOH HOH . L 4 HOH B 17 717 42 HOH HOH . L 4 HOH B 18 718 72 HOH HOH . L 4 HOH B 19 719 48 HOH HOH . L 4 HOH B 20 720 159 HOH HOH . L 4 HOH B 21 721 66 HOH HOH . L 4 HOH B 22 722 5 HOH HOH . L 4 HOH B 23 723 164 HOH HOH . L 4 HOH B 24 724 46 HOH HOH . L 4 HOH B 25 725 41 HOH HOH . L 4 HOH B 26 726 74 HOH HOH . L 4 HOH B 27 727 93 HOH HOH . L 4 HOH B 28 728 153 HOH HOH . L 4 HOH B 29 729 2 HOH HOH . L 4 HOH B 30 730 141 HOH HOH . L 4 HOH B 31 731 77 HOH HOH . L 4 HOH B 32 732 121 HOH HOH . L 4 HOH B 33 733 27 HOH HOH . L 4 HOH B 34 734 67 HOH HOH . L 4 HOH B 35 735 70 HOH HOH . L 4 HOH B 36 736 123 HOH HOH . L 4 HOH B 37 737 92 HOH HOH . L 4 HOH B 38 738 81 HOH HOH . L 4 HOH B 39 739 36 HOH HOH . L 4 HOH B 40 740 165 HOH HOH . L 4 HOH B 41 741 3 HOH HOH . L 4 HOH B 42 742 50 HOH HOH . L 4 HOH B 43 743 136 HOH HOH . L 4 HOH B 44 744 132 HOH HOH . L 4 HOH B 45 745 25 HOH HOH . L 4 HOH B 46 746 109 HOH HOH . L 4 HOH B 47 747 71 HOH HOH . L 4 HOH B 48 748 129 HOH HOH . L 4 HOH B 49 749 65 HOH HOH . L 4 HOH B 50 750 15 HOH HOH . L 4 HOH B 51 751 156 HOH HOH . L 4 HOH B 52 752 11 HOH HOH . L 4 HOH B 53 753 126 HOH HOH . L 4 HOH B 54 754 133 HOH HOH . L 4 HOH B 55 755 35 HOH HOH . L 4 HOH B 56 756 20 HOH HOH . L 4 HOH B 57 757 110 HOH HOH . L 4 HOH B 58 758 61 HOH HOH . M 4 HOH C 1 701 105 HOH HOH . M 4 HOH C 2 702 84 HOH HOH . M 4 HOH C 3 703 137 HOH HOH . M 4 HOH C 4 704 97 HOH HOH . M 4 HOH C 5 705 172 HOH HOH . M 4 HOH C 6 706 125 HOH HOH . M 4 HOH C 7 707 145 HOH HOH . M 4 HOH C 8 708 22 HOH HOH . M 4 HOH C 9 709 21 HOH HOH . M 4 HOH C 10 710 45 HOH HOH . M 4 HOH C 11 711 138 HOH HOH . M 4 HOH C 12 712 107 HOH HOH . M 4 HOH C 13 713 146 HOH HOH . M 4 HOH C 14 714 131 HOH HOH . M 4 HOH C 15 715 176 HOH HOH . M 4 HOH C 16 716 1 HOH HOH . M 4 HOH C 17 717 30 HOH HOH . M 4 HOH C 18 718 152 HOH HOH . M 4 HOH C 19 719 39 HOH HOH . M 4 HOH C 20 720 161 HOH HOH . M 4 HOH C 21 721 122 HOH HOH . M 4 HOH C 22 722 43 HOH HOH . M 4 HOH C 23 723 29 HOH HOH . M 4 HOH C 24 724 119 HOH HOH . M 4 HOH C 25 725 23 HOH HOH . M 4 HOH C 26 726 154 HOH HOH . M 4 HOH C 27 727 149 HOH HOH . M 4 HOH C 28 728 173 HOH HOH . N 4 HOH D 1 701 151 HOH HOH . N 4 HOH D 2 702 174 HOH HOH . N 4 HOH D 3 703 80 HOH HOH . N 4 HOH D 4 704 142 HOH HOH . N 4 HOH D 5 705 14 HOH HOH . N 4 HOH D 6 706 54 HOH HOH . N 4 HOH D 7 707 16 HOH HOH . N 4 HOH D 8 708 144 HOH HOH . N 4 HOH D 9 709 57 HOH HOH . N 4 HOH D 10 710 17 HOH HOH . N 4 HOH D 11 711 18 HOH HOH . N 4 HOH D 12 712 182 HOH HOH . N 4 HOH D 13 713 175 HOH HOH . N 4 HOH D 14 714 49 HOH HOH . N 4 HOH D 15 715 78 HOH HOH . N 4 HOH D 16 716 53 HOH HOH . N 4 HOH D 17 717 116 HOH HOH . N 4 HOH D 18 718 89 HOH HOH . N 4 HOH D 19 719 34 HOH HOH . N 4 HOH D 20 720 155 HOH HOH . N 4 HOH D 21 721 104 HOH HOH . N 4 HOH D 22 722 113 HOH HOH . N 4 HOH D 23 723 162 HOH HOH . N 4 HOH D 24 724 106 HOH HOH . N 4 HOH D 25 725 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . F 3 -11.403 -28.038 -18.194 1 53.73 ? C FMT 602 A 1 HETATM 2 O O1 FMT . . . F 3 -12.424 -27.481 -18.544 1 53.28 ? O1 FMT 602 A 1 HETATM 3 O O2 FMT . . . F 3 -10.357 -28.212 -18.945 1 53.88 ? O2 FMT 602 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 357 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 3 #