data_6S8Z # _model_server_result.job_id jZluaJmmEqOFXz4Ge8-CHg _model_server_result.datetime_utc '2025-03-27 01:20:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6s8z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 6S8Z # _exptl.entry_id 6S8Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.09 _cell.angle_gamma 90 _cell.entry_id 6S8Z _cell.length_a 51.201 _cell.length_b 38.163 _cell.length_c 55.356 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6S8Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 76 n n C1 C2 EDO sing 77 n n C1 H11 EDO sing 78 n n C1 H12 EDO sing 79 n n O1 HO1 EDO sing 80 n n C2 O2 EDO sing 81 n n C2 H21 EDO sing 82 n n C2 H22 EDO sing 83 n n O2 HO2 EDO sing 84 n n # _atom_sites.entry_id 6S8Z _atom_sites.fract_transf_matrix[1][1] 0.019531 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001054 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026203 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018091 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 201 201 ACT ACT . C 2 ACT A 1 202 2 ACT ACT . D 2 ACT A 1 203 3 ACT ACT . E 3 EDO A 1 204 5 EDO EDO . F 4 NA A 1 205 1 NA NA . G 5 HOH A 1 301 26 HOH HOH . G 5 HOH A 2 302 3 HOH HOH . G 5 HOH A 3 303 6 HOH HOH . G 5 HOH A 4 304 21 HOH HOH . G 5 HOH A 5 305 28 HOH HOH . G 5 HOH A 6 306 33 HOH HOH . G 5 HOH A 7 307 44 HOH HOH . G 5 HOH A 8 308 27 HOH HOH . G 5 HOH A 9 309 39 HOH HOH . G 5 HOH A 10 310 16 HOH HOH . G 5 HOH A 11 311 10 HOH HOH . G 5 HOH A 12 312 45 HOH HOH . G 5 HOH A 13 313 49 HOH HOH . G 5 HOH A 14 314 1 HOH HOH . G 5 HOH A 15 315 57 HOH HOH . G 5 HOH A 16 316 56 HOH HOH . G 5 HOH A 17 317 50 HOH HOH . G 5 HOH A 18 318 18 HOH HOH . G 5 HOH A 19 319 12 HOH HOH . G 5 HOH A 20 320 2 HOH HOH . G 5 HOH A 21 321 34 HOH HOH . G 5 HOH A 22 322 40 HOH HOH . G 5 HOH A 23 323 25 HOH HOH . G 5 HOH A 24 324 48 HOH HOH . G 5 HOH A 25 325 20 HOH HOH . G 5 HOH A 26 326 17 HOH HOH . G 5 HOH A 27 327 54 HOH HOH . G 5 HOH A 28 328 32 HOH HOH . G 5 HOH A 29 329 22 HOH HOH . G 5 HOH A 30 330 15 HOH HOH . G 5 HOH A 31 331 4 HOH HOH . G 5 HOH A 32 332 55 HOH HOH . G 5 HOH A 33 333 5 HOH HOH . G 5 HOH A 34 334 11 HOH HOH . G 5 HOH A 35 335 19 HOH HOH . G 5 HOH A 36 336 9 HOH HOH . G 5 HOH A 37 337 46 HOH HOH . G 5 HOH A 38 338 58 HOH HOH . G 5 HOH A 39 339 29 HOH HOH . G 5 HOH A 40 340 47 HOH HOH . G 5 HOH A 41 341 41 HOH HOH . G 5 HOH A 42 342 8 HOH HOH . G 5 HOH A 43 343 51 HOH HOH . G 5 HOH A 44 344 37 HOH HOH . G 5 HOH A 45 345 52 HOH HOH . G 5 HOH A 46 346 53 HOH HOH . G 5 HOH A 47 347 7 HOH HOH . G 5 HOH A 48 348 13 HOH HOH . G 5 HOH A 49 349 42 HOH HOH . G 5 HOH A 50 350 30 HOH HOH . G 5 HOH A 51 351 36 HOH HOH . G 5 HOH A 52 352 14 HOH HOH . G 5 HOH A 53 353 31 HOH HOH . G 5 HOH A 54 354 35 HOH HOH . G 5 HOH A 55 355 24 HOH HOH . G 5 HOH A 56 356 59 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 3 -9.091 -9.908 42.335 1 55.04 ? C1 EDO 204 A 1 HETATM 2 O O1 EDO . . . E 3 -9.582 -9.838 41.014 1 54.69 ? O1 EDO 204 A 1 HETATM 3 C C2 EDO . . . E 3 -8.492 -11.221 42.663 1 54.99 ? C2 EDO 204 A 1 HETATM 4 O O2 EDO . . . E 3 -7.452 -11.581 41.78 1 54.23 ? O2 EDO 204 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #