data_6S96 # _model_server_result.job_id DE0FJQHw5NXEa03gixSe7g _model_server_result.datetime_utc '2024-11-04 23:08:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6s96 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 6S96 # _exptl.entry_id 6S96 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6S96 _cell.length_a 120.927 _cell.length_b 120.927 _cell.length_c 45.344 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6S96 _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall 'P 61' _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O HIS 123 B HIS 122 1_555 D NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.944 ? metalc ? metalc2 A O PRO 124 B PRO 123 1_555 D NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.88 ? metalc ? metalc3 A OD1 ASN 125 B ASN 124 1_555 D NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? metalc ? metalc4 B O HIS 123 A HIS 122 1_555 D NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.938 ? metalc ? metalc5 B O PRO 124 A PRO 123 1_555 D NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.839 ? metalc ? metalc6 B OD1 ASN 125 A ASN 124 1_555 D NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6S96 _atom_sites.fract_transf_matrix[1][1] 0.008269 _atom_sites.fract_transf_matrix[1][2] 0.004774 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009549 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022054 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMT B 1 201 1 FMT FMT . D 3 NA A 1 201 2 NA NA . E 2 FMT A 1 202 2 FMT FMT . F 2 FMT A 1 203 3 FMT FMT . G 4 HOH B 1 301 10 HOH HOH . G 4 HOH B 2 302 15 HOH HOH . G 4 HOH B 3 303 49 HOH HOH . G 4 HOH B 4 304 32 HOH HOH . G 4 HOH B 5 305 23 HOH HOH . G 4 HOH B 6 306 35 HOH HOH . G 4 HOH B 7 307 21 HOH HOH . G 4 HOH B 8 308 33 HOH HOH . G 4 HOH B 9 309 13 HOH HOH . G 4 HOH B 10 310 11 HOH HOH . G 4 HOH B 11 311 6 HOH HOH . G 4 HOH B 12 312 47 HOH HOH . G 4 HOH B 13 313 20 HOH HOH . G 4 HOH B 14 314 52 HOH HOH . G 4 HOH B 15 315 55 HOH HOH . G 4 HOH B 16 316 4 HOH HOH . G 4 HOH B 17 317 64 HOH HOH . G 4 HOH B 18 318 36 HOH HOH . G 4 HOH B 19 319 50 HOH HOH . G 4 HOH B 20 320 62 HOH HOH . G 4 HOH B 21 321 27 HOH HOH . G 4 HOH B 22 322 60 HOH HOH . G 4 HOH B 23 323 61 HOH HOH . H 4 HOH A 1 301 65 HOH HOH . H 4 HOH A 2 302 34 HOH HOH . H 4 HOH A 3 303 31 HOH HOH . H 4 HOH A 4 304 37 HOH HOH . H 4 HOH A 5 305 8 HOH HOH . H 4 HOH A 6 306 5 HOH HOH . H 4 HOH A 7 307 45 HOH HOH . H 4 HOH A 8 308 12 HOH HOH . H 4 HOH A 9 309 58 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -7.394 _atom_site.Cartn_y 37.51 _atom_site.Cartn_z 1.896 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.92 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #