data_6SAG # _model_server_result.job_id UM-BHRdyCr0wTlLOe5W1iQ _model_server_result.datetime_utc '2025-02-25 15:59:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sag # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 6SAG # _exptl.entry_id 6SAG _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SAG _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SAG _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details 'UCSF CHIMERA 1.11.2_b41376.' _pdbx_struct_assembly.oligomeric_details 160-meric _pdbx_struct_assembly.oligomeric_count 160 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'point symmetry operation' ? ? 0.926988 -0.375092 0 0.375092 0.926988 0 0 0 1 69.46963 -46.8314 1.408 3 'point symmetry operation' ? ? 0.718612 -0.695411 0 0.695411 0.718612 0 0 0 1 151.4332 -64.18602 2.816 4 'point symmetry operation' ? ? 0.405301 -0.914183 0 0.914183 0.405301 0 0 0 1 233.92199 -49.52966 4.224 5 'point symmetry operation' ? ? 0.032806 -0.999462 0 0.999462 0.032806 0 0 0 1 304.89059 -5.00251 5.632 6 'point symmetry operation' ? ? -0.344479 -0.938794 0 0.938794 -0.344479 0 0 0 1 353.97582 62.89336 7.04 7 'point symmetry operation' ? ? -0.671462 -0.741039 0 0.741039 -0.671462 0 0 0 1 374.01003 144.24347 8.448 8 'point symmetry operation' ? ? -0.900395 -0.435074 0 0.435074 -0.900395 0 0 0 1 362.06771 227.16868 9.856 9 'point symmetry operation' ? ? -0.997847 -0.065577 0 0.065577 -0.997847 0 0 0 1 319.89274 299.55985 11.264 10 'point symmetry operation' ? ? -0.94959 0.313495 0 -0.313495 -0.94959 0 0 0 1 253.64372 350.84608 12.672 11 'point symmetry operation' ? ? -0.762668 0.64679 0 -0.64679 -0.762668 0 0 0 1 172.99465 373.53829 14.08 12 'point symmetry operation' ? ? -0.464378 0.885637 0 -0.885637 -0.464378 0 0 0 1 89.72229 364.32287 15.488 13 'point symmetry operation' ? ? -0.098278 0.995159 0 -0.995159 -0.098278 0 0 0 1 15.98648 324.54549 16.896 14 'point symmetry operation' ? ? 0.282174 0.959363 0 -0.959363 0.282174 0 0 0 1 -37.44552 260.01464 18.304 15 'point symmetry operation' ? ? 0.621421 0.783477 0 -0.783477 0.621421 0 0 0 1 -62.77132 180.15343 19.712 16 'point symmetry operation' ? ? 0.869926 0.493183 0 -0.493183 0.869926 0 0 0 1 -56.29272 96.62357 21.12 17 'point symmetry operation' ? ? 0.991399 0.130872 0 -0.130872 0.991399 0 0 0 1 -18.95575 21.6225 22.528 18 'point symmetry operation' ? ? 0.968104 -0.250549 0 0.250549 0.968104 0 0 0 1 43.78746 -33.89776 23.936 19 'point symmetry operation' ? ? 0.803441 -0.595384 0 0.595384 0.803441 0 0 0 1 122.77484 -61.82988 25.344 20 'point symmetry operation' ? ? 0.521456 -0.853278 0 0.853278 0.521456 0 0 0 1 206.47227 -58.09507 26.752 21 'point symmetry operation' ? ? 0.163326 -0.986572 0 0.986572 0.163326 0 0 0 1 282.65786 -23.23871 28.16 22 'point symmetry operation' ? ? -0.218654 -0.975802 0 0.975802 -0.218654 0 0 0 1 340.20661 37.64931 29.568 23 'point symmetry operation' ? ? -0.568705 -0.822541 0 0.822541 -0.568705 0 0 0 1 370.71497 115.67783 30.976 24 'point symmetry operation' ? ? -0.835712 -0.549169 0 0.549169 -0.835712 0 0 0 1 369.72798 199.45274 32.384 25 'point symmetry operation' ? ? -0.980683 -0.195604 0 0.195604 -0.980683 0 0 0 1 337.38975 276.74082 33.792 26 'point symmetry operation' ? ? -0.98245 0.186524 0 -0.186524 -0.98245 0 0 0 1 278.42246 336.25611 35.2 27 'point symmetry operation' ? ? -0.840756 0.541415 0 -0.541415 -0.840756 0 0 0 1 201.43682 369.30788 36.608 28 'point symmetry operation' ? ? -0.57629 0.817245 0 -0.817245 -0.57629 0 0 0 1 117.67462 371.06976 38.016 29 'point symmetry operation' ? ? -0.227671 0.973738 0 -0.973738 -0.227671 0 0 0 1 39.36724 341.28447 39.424 30 'point symmetry operation' ? ? 0.154193 0.988041 0 -0.988041 0.154193 0 0 0 1 -22.05051 284.3014 40.832 31 'point symmetry operation' ? ? 0.513541 0.858065 0 -0.858065 0.513541 0 0 0 1 -57.6101 208.4415 42.24 32 'point symmetry operation' ? ? 0.7979 0.60279 0 -0.60279 0.7979 0 0 0 1 -62.11896 124.78219 43.648 33 'point symmetry operation' ? ? 0.965745 0.259493 0 -0.259493 0.965745 0 0 0 1 -34.91868 45.53982 45.056 34 'point symmetry operation' ? ? 0.992567 -0.121696 0 0.121696 0.992567 0 0 0 1 20.01882 -17.71427 46.464 35 'point symmetry operation' ? ? 0.87445 -0.485115 0 0.485115 0.87445 0 0 0 1 94.67131 -55.74341 47.872 36 'point symmetry operation' ? ? 0.628642 -0.777695 0 0.777695 0.628642 0 0 0 1 178.13767 -62.9944 49.28 37 'point symmetry operation' ? ? 0.291036 -0.956712 0 0.956712 0.291036 0 0 0 1 258.22973 -38.40841 50.688 38 'point symmetry operation' ? ? -0.089068 -0.996026 0 0.996026 -0.089068 0 0 0 1 323.25207 14.42439 52.096 39 'point symmetry operation' ? ? -0.456166 -0.889895 0 0.889895 -0.456166 0 0 0 1 363.70981 87.78911 53.504 40 'point symmetry operation' ? ? -0.756653 -0.653817 0 0.653817 -0.756653 0 0 0 1 373.69512 170.97266 54.912 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ACE 1 A ACE 0 1_555 A N SER 2 A SER 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? metalc ? metalc1 A OD1 ASN 102 A ASN 101 1_555 C CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? metalc ? metalc2 A O PRO 103 A PRO 102 1_555 C CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc3 C CA CA . A CA 201 1_555 H O HOH . A HOH 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.775 ? metalc ? metalc4 C CA CA . A CA 201 1_555 H O HOH . A HOH 360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.733 ? metalc ? metalc5 B OP2 G 1 R G 4 1_555 G MG MG . R MG 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc6 B OP2 A 2 R A 5 1_555 D MG MG . R MG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? metalc ? metalc7 B OP1 A 2 R A 5 1_555 F MG MG . R MG 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? metalc ? metalc8 B OP1 A 3 R A 6 1_555 F MG MG . R MG 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? metalc ? metalc9 G MG MG . R MG 104 1_555 I O HOH . R HOH 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6SAG _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 201 1 CA CA . D 4 MG R 1 101 1 MG MG . E 4 MG R 1 102 2 MG MG . F 4 MG R 1 103 3 MG MG . G 4 MG R 1 104 4 MG MG . H 5 HOH A 1 301 214 HOH HOH . H 5 HOH A 2 302 36 HOH HOH . H 5 HOH A 3 303 196 HOH HOH . H 5 HOH A 4 304 22 HOH HOH . H 5 HOH A 5 305 201 HOH HOH . H 5 HOH A 6 306 180 HOH HOH . H 5 HOH A 7 307 121 HOH HOH . H 5 HOH A 8 308 5 HOH HOH . H 5 HOH A 9 309 137 HOH HOH . H 5 HOH A 10 310 210 HOH HOH . H 5 HOH A 11 311 211 HOH HOH . H 5 HOH A 12 312 96 HOH HOH . H 5 HOH A 13 313 92 HOH HOH . H 5 HOH A 14 314 35 HOH HOH . H 5 HOH A 15 315 2 HOH HOH . H 5 HOH A 16 316 171 HOH HOH . H 5 HOH A 17 317 224 HOH HOH . H 5 HOH A 18 318 68 HOH HOH . H 5 HOH A 19 319 141 HOH HOH . H 5 HOH A 20 320 72 HOH HOH . H 5 HOH A 21 321 150 HOH HOH . H 5 HOH A 22 322 161 HOH HOH . H 5 HOH A 23 323 163 HOH HOH . H 5 HOH A 24 324 80 HOH HOH . H 5 HOH A 25 325 14 HOH HOH . H 5 HOH A 26 326 140 HOH HOH . H 5 HOH A 27 327 6 HOH HOH . H 5 HOH A 28 328 28 HOH HOH . H 5 HOH A 29 329 175 HOH HOH . H 5 HOH A 30 330 105 HOH HOH . H 5 HOH A 31 331 3 HOH HOH . H 5 HOH A 32 332 94 HOH HOH . H 5 HOH A 33 333 147 HOH HOH . H 5 HOH A 34 334 29 HOH HOH . H 5 HOH A 35 335 170 HOH HOH . H 5 HOH A 36 336 26 HOH HOH . H 5 HOH A 37 337 42 HOH HOH . H 5 HOH A 38 338 4 HOH HOH . H 5 HOH A 39 339 205 HOH HOH . H 5 HOH A 40 340 202 HOH HOH . H 5 HOH A 41 341 142 HOH HOH . H 5 HOH A 42 342 37 HOH HOH . H 5 HOH A 43 343 181 HOH HOH . H 5 HOH A 44 344 32 HOH HOH . H 5 HOH A 45 345 33 HOH HOH . H 5 HOH A 46 346 1 HOH HOH . H 5 HOH A 47 347 157 HOH HOH . H 5 HOH A 48 348 215 HOH HOH . H 5 HOH A 49 349 206 HOH HOH . H 5 HOH A 50 350 102 HOH HOH . H 5 HOH A 51 351 204 HOH HOH . H 5 HOH A 52 352 185 HOH HOH . H 5 HOH A 53 353 73 HOH HOH . H 5 HOH A 54 354 117 HOH HOH . H 5 HOH A 55 355 71 HOH HOH . H 5 HOH A 56 356 74 HOH HOH . H 5 HOH A 57 357 191 HOH HOH . H 5 HOH A 58 358 225 HOH HOH . H 5 HOH A 59 359 220 HOH HOH . H 5 HOH A 60 360 203 HOH HOH . H 5 HOH A 61 361 208 HOH HOH . H 5 HOH A 62 362 87 HOH HOH . H 5 HOH A 63 363 209 HOH HOH . H 5 HOH A 64 364 183 HOH HOH . H 5 HOH A 65 365 173 HOH HOH . H 5 HOH A 66 366 153 HOH HOH . H 5 HOH A 67 367 186 HOH HOH . H 5 HOH A 68 368 187 HOH HOH . I 5 HOH R 1 201 52 HOH HOH . I 5 HOH R 2 202 56 HOH HOH . I 5 HOH R 3 203 176 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 156.312 _atom_site.Cartn_y 132.117 _atom_site.Cartn_z 160.813 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #