data_6SB7
#
_model_server_result.job_id            v4wz7K3-xLCMMQscJUiBfA 
_model_server_result.datetime_utc      '2024-11-24 19:43:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6sb7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":305}' 
#
_entry.id    6SB7 
#
_exptl.entry_id    6SB7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.333 
_cell.angle_gamma         90 
_cell.entry_id            6SB7 
_cell.length_a            42.497 
_cell.length_b            41.657 
_cell.length_c            72.496 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6SB7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 F N N 
? 5 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O THR 42 A THR 37 1_555 G NA NA . A NA 306 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.633 ? 
metalc ? metalc2 A O ASN 67 A ASN 62 1_555 B HG HG . A HG 301 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.936 ? 
metalc ? metalc3 A OG SER 78 A SER 73 1_555 F NA NA . A NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
metalc ? metalc4 A NE2 HIS 99 A HIS 94 1_555 D ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
metalc ? metalc5 A NE2 HIS 101 A HIS 96 1_555 D ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
metalc ? metalc6 A ND1 HIS 124 A HIS 119 1_555 D ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
metalc ? metalc7 A O VAL 139 A VAL 135 1_555 C HG HG . A HG 302 1_555 ? ? ? ? B ? ? ? ? ? ? ? 3.111 ? 
metalc ? metalc8 A O GLN 141 A GLN 137 1_555 I HG BE7 . A BE7 308 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.987 ? 
metalc ? metalc9 A SG CYS 210 A CYS 206 1_555 C HG HG . A HG 302 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.793 ? 
metalc ? metalc10 A SG CYS 210 A CYS 206 1_555 I HG BE7 . A BE7 308 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.381 ? 
metalc ? metalc11 A OG SER 224 A SER 220 1_555 F NA NA . A NA 305 1_545 ? A ? ? ? ? ? ? ? ? ? ? 2.533 ? 
metalc ? metalc12 C HG HG . A HG 302 1_555 L O HOH . A HOH 460 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.619 ? 
metalc ? metalc13 D ZN ZN . A ZN 303 1_555 K N 8K2 . A 8K2 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? 
metalc ? metalc14 D ZN ZN . A ZN 303 1_555 K S 8K2 . A 8K2 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.942 ? 
metalc ? metalc15 F NA NA . A NA 305 1_555 L O HOH . A HOH 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? 
metalc ? metalc16 F NA NA . A NA 305 1_555 L O HOH . A HOH 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? 
metalc ? metalc17 F NA NA . A NA 305 1_555 L O HOH . A HOH 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? 
metalc ? metalc18 G NA NA . A NA 306 1_555 L O HOH . A HOH 498 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.84 ? 
metalc ? metalc19 G NA NA . A NA 306 1_555 L O HOH . A HOH 540 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.471 ? 
metalc ? metalc20 H HG BE7 . A BE7 307 1_555 J N TRS . A TRS 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? 
metalc ? metalc21 H HG BE7 . A BE7 307 1_555 J O1 TRS . A TRS 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.727 ? 
metalc ? metalc22 H HG BE7 . A BE7 307 1_555 L O HOH . A HOH 528 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.974 ? 
metalc ? metalc23 H HG BE7 . A BE7 307 1_555 L O HOH . A HOH 528 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.966 ? 
metalc ? metalc24 I HG BE7 . A BE7 308 1_555 L O HOH . A HOH 460 1_555 ? A ? ? ? ? ? ? ? ? ? ? 3.002 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6SB7 
_atom_sites.fract_transf_matrix[1][1]    0.023531 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006012 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024006 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014237 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HG A 1 301 1 HG HG . 
C 2 HG A 1 302 2 HG HG . 
D 3 ZN A 1 303 1 ZN ZN . 
E 4 DMS A 1 304 1 DMS DMS . 
F 5 NA A 1 305 1 NA NA . 
G 5 NA A 1 306 2 NA NA . 
H 6 BE7 A 1 307 1 BE7 BE7 . 
I 6 BE7 A 1 308 2 BE7 BE7 . 
J 7 TRS A 1 309 1 TRS TRS . 
K 8 8K2 A 1 310 1 8K2 8K2 . 
L 9 HOH A 1 401 111 HOH HOH . 
L 9 HOH A 2 402 90 HOH HOH . 
L 9 HOH A 3 403 61 HOH HOH . 
L 9 HOH A 4 404 16 HOH HOH . 
L 9 HOH A 5 405 28 HOH HOH . 
L 9 HOH A 6 406 46 HOH HOH . 
L 9 HOH A 7 407 120 HOH HOH . 
L 9 HOH A 8 408 151 HOH HOH . 
L 9 HOH A 9 409 3 HOH HOH . 
L 9 HOH A 10 410 107 HOH HOH . 
L 9 HOH A 11 411 56 HOH HOH . 
L 9 HOH A 12 412 55 HOH HOH . 
L 9 HOH A 13 413 180 HOH HOH . 
L 9 HOH A 14 414 47 HOH HOH . 
L 9 HOH A 15 415 115 HOH HOH . 
L 9 HOH A 16 416 68 HOH HOH . 
L 9 HOH A 17 417 43 HOH HOH . 
L 9 HOH A 18 418 93 HOH HOH . 
L 9 HOH A 19 419 123 HOH HOH . 
L 9 HOH A 20 420 105 HOH HOH . 
L 9 HOH A 21 421 14 HOH HOH . 
L 9 HOH A 22 422 34 HOH HOH . 
L 9 HOH A 23 423 104 HOH HOH . 
L 9 HOH A 24 424 137 HOH HOH . 
L 9 HOH A 25 425 13 HOH HOH . 
L 9 HOH A 26 426 112 HOH HOH . 
L 9 HOH A 27 427 76 HOH HOH . 
L 9 HOH A 28 428 23 HOH HOH . 
L 9 HOH A 29 429 95 HOH HOH . 
L 9 HOH A 30 430 52 HOH HOH . 
L 9 HOH A 31 431 35 HOH HOH . 
L 9 HOH A 32 432 18 HOH HOH . 
L 9 HOH A 33 433 176 HOH HOH . 
L 9 HOH A 34 434 38 HOH HOH . 
L 9 HOH A 35 435 138 HOH HOH . 
L 9 HOH A 36 436 80 HOH HOH . 
L 9 HOH A 37 437 22 HOH HOH . 
L 9 HOH A 38 438 73 HOH HOH . 
L 9 HOH A 39 439 165 HOH HOH . 
L 9 HOH A 40 440 25 HOH HOH . 
L 9 HOH A 41 441 75 HOH HOH . 
L 9 HOH A 42 442 133 HOH HOH . 
L 9 HOH A 43 443 79 HOH HOH . 
L 9 HOH A 44 444 163 HOH HOH . 
L 9 HOH A 45 445 89 HOH HOH . 
L 9 HOH A 46 446 167 HOH HOH . 
L 9 HOH A 47 447 106 HOH HOH . 
L 9 HOH A 48 448 91 HOH HOH . 
L 9 HOH A 49 449 19 HOH HOH . 
L 9 HOH A 50 450 113 HOH HOH . 
L 9 HOH A 51 451 11 HOH HOH . 
L 9 HOH A 52 452 170 HOH HOH . 
L 9 HOH A 53 453 7 HOH HOH . 
L 9 HOH A 54 454 21 HOH HOH . 
L 9 HOH A 55 455 4 HOH HOH . 
L 9 HOH A 56 456 96 HOH HOH . 
L 9 HOH A 57 457 36 HOH HOH . 
L 9 HOH A 58 458 63 HOH HOH . 
L 9 HOH A 59 459 110 HOH HOH . 
L 9 HOH A 60 460 99 HOH HOH . 
L 9 HOH A 61 461 30 HOH HOH . 
L 9 HOH A 62 462 44 HOH HOH . 
L 9 HOH A 63 463 72 HOH HOH . 
L 9 HOH A 64 464 50 HOH HOH . 
L 9 HOH A 65 465 102 HOH HOH . 
L 9 HOH A 66 466 119 HOH HOH . 
L 9 HOH A 67 467 8 HOH HOH . 
L 9 HOH A 68 468 57 HOH HOH . 
L 9 HOH A 69 469 12 HOH HOH . 
L 9 HOH A 70 470 33 HOH HOH . 
L 9 HOH A 71 471 88 HOH HOH . 
L 9 HOH A 72 472 81 HOH HOH . 
L 9 HOH A 73 473 71 HOH HOH . 
L 9 HOH A 74 474 10 HOH HOH . 
L 9 HOH A 75 475 121 HOH HOH . 
L 9 HOH A 76 476 127 HOH HOH . 
L 9 HOH A 77 477 140 HOH HOH . 
L 9 HOH A 78 478 9 HOH HOH . 
L 9 HOH A 79 479 15 HOH HOH . 
L 9 HOH A 80 480 20 HOH HOH . 
L 9 HOH A 81 481 6 HOH HOH . 
L 9 HOH A 82 482 59 HOH HOH . 
L 9 HOH A 83 483 179 HOH HOH . 
L 9 HOH A 84 484 29 HOH HOH . 
L 9 HOH A 85 485 78 HOH HOH . 
L 9 HOH A 86 486 67 HOH HOH . 
L 9 HOH A 87 487 134 HOH HOH . 
L 9 HOH A 88 488 143 HOH HOH . 
L 9 HOH A 89 489 40 HOH HOH . 
L 9 HOH A 90 490 122 HOH HOH . 
L 9 HOH A 91 491 169 HOH HOH . 
L 9 HOH A 92 492 26 HOH HOH . 
L 9 HOH A 93 493 66 HOH HOH . 
L 9 HOH A 94 494 37 HOH HOH . 
L 9 HOH A 95 495 58 HOH HOH . 
L 9 HOH A 96 496 74 HOH HOH . 
L 9 HOH A 97 497 32 HOH HOH . 
L 9 HOH A 98 498 51 HOH HOH . 
L 9 HOH A 99 499 108 HOH HOH . 
L 9 HOH A 100 500 84 HOH HOH . 
L 9 HOH A 101 501 146 HOH HOH . 
L 9 HOH A 102 502 69 HOH HOH . 
L 9 HOH A 103 503 62 HOH HOH . 
L 9 HOH A 104 504 174 HOH HOH . 
L 9 HOH A 105 505 41 HOH HOH . 
L 9 HOH A 106 506 24 HOH HOH . 
L 9 HOH A 107 507 166 HOH HOH . 
L 9 HOH A 108 508 60 HOH HOH . 
L 9 HOH A 109 509 83 HOH HOH . 
L 9 HOH A 110 510 64 HOH HOH . 
L 9 HOH A 111 511 172 HOH HOH . 
L 9 HOH A 112 512 45 HOH HOH . 
L 9 HOH A 113 513 27 HOH HOH . 
L 9 HOH A 114 514 65 HOH HOH . 
L 9 HOH A 115 515 145 HOH HOH . 
L 9 HOH A 116 516 48 HOH HOH . 
L 9 HOH A 117 517 2 HOH HOH . 
L 9 HOH A 118 518 94 HOH HOH . 
L 9 HOH A 119 519 42 HOH HOH . 
L 9 HOH A 120 520 109 HOH HOH . 
L 9 HOH A 121 521 97 HOH HOH . 
L 9 HOH A 122 522 53 HOH HOH . 
L 9 HOH A 123 523 157 HOH HOH . 
L 9 HOH A 124 524 181 HOH HOH . 
L 9 HOH A 125 525 171 HOH HOH . 
L 9 HOH A 126 526 49 HOH HOH . 
L 9 HOH A 127 527 39 HOH HOH . 
L 9 HOH A 128 528 164 HOH HOH . 
L 9 HOH A 129 529 77 HOH HOH . 
L 9 HOH A 130 530 160 HOH HOH . 
L 9 HOH A 131 531 118 HOH HOH . 
L 9 HOH A 132 532 100 HOH HOH . 
L 9 HOH A 133 533 129 HOH HOH . 
L 9 HOH A 134 534 101 HOH HOH . 
L 9 HOH A 135 535 154 HOH HOH . 
L 9 HOH A 136 536 103 HOH HOH . 
L 9 HOH A 137 537 156 HOH HOH . 
L 9 HOH A 138 538 158 HOH HOH . 
L 9 HOH A 139 539 87 HOH HOH . 
L 9 HOH A 140 540 178 HOH HOH . 
L 9 HOH A 141 541 116 HOH HOH . 
L 9 HOH A 142 542 168 HOH HOH . 
L 9 HOH A 143 543 149 HOH HOH . 
L 9 HOH A 144 544 141 HOH HOH . 
L 9 HOH A 145 545 173 HOH HOH . 
L 9 HOH A 146 546 114 HOH HOH . 
L 9 HOH A 147 547 135 HOH HOH . 
L 9 HOH A 148 548 177 HOH HOH . 
L 9 HOH A 149 549 117 HOH HOH . 
L 9 HOH A 150 550 54 HOH HOH . 
L 9 HOH A 151 551 155 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               3.203 
_atom_site.Cartn_y               18.819 
_atom_site.Cartn_z               6.304 
_atom_site.occupancy             0.54 
_atom_site.B_iso_or_equiv        18.15 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           305 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#