data_6SB8 # _model_server_result.job_id mnAsrR1iKjfIC3xYg4R5Zg _model_server_result.datetime_utc '2024-12-23 17:35:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sb8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 6SB8 # _exptl.entry_id 6SB8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 90.121 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (R,R)-2,3-BUTANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SB8 _cell.length_a 41.781 _cell.length_b 47.746 _cell.length_c 57.217 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SB8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O2' _chem_comp.formula_weight 90.121 _chem_comp.id BU3 _chem_comp.mon_nstd_flag . _chem_comp.name (R,R)-2,3-BUTANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O6 C3 BU3 sing 70 n n O6 HO6 BU3 sing 71 n n C3 C4 BU3 sing 72 n n C3 C2 BU3 sing 73 n n C3 H3 BU3 sing 74 n n C4 H41 BU3 sing 75 n n C4 H42 BU3 sing 76 n n C4 H43 BU3 sing 77 n n C2 O5 BU3 sing 78 n n C2 C1 BU3 sing 79 n n C2 H2 BU3 sing 80 n n O5 HO5 BU3 sing 81 n n C1 H11 BU3 sing 82 n n C1 H12 BU3 sing 83 n n C1 H13 BU3 sing 84 n n # _atom_sites.entry_id 6SB8 _atom_sites.fract_transf_matrix[1][1] 0.023934 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020944 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017477 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 L45 A 1 201 201 L45 B14 . C 3 BU3 A 1 202 301 BU3 BU3 . D 4 HOH A 1 301 163 HOH HOH . D 4 HOH A 2 302 128 HOH HOH . D 4 HOH A 3 303 70 HOH HOH . D 4 HOH A 4 304 59 HOH HOH . D 4 HOH A 5 305 131 HOH HOH . D 4 HOH A 6 306 107 HOH HOH . D 4 HOH A 7 307 140 HOH HOH . D 4 HOH A 8 308 145 HOH HOH . D 4 HOH A 9 309 68 HOH HOH . D 4 HOH A 10 310 120 HOH HOH . D 4 HOH A 11 311 166 HOH HOH . D 4 HOH A 12 312 78 HOH HOH . D 4 HOH A 13 313 168 HOH HOH . D 4 HOH A 14 314 123 HOH HOH . D 4 HOH A 15 315 51 HOH HOH . D 4 HOH A 16 316 34 HOH HOH . D 4 HOH A 17 317 177 HOH HOH . D 4 HOH A 18 318 134 HOH HOH . D 4 HOH A 19 319 43 HOH HOH . D 4 HOH A 20 320 19 HOH HOH . D 4 HOH A 21 321 3 HOH HOH . D 4 HOH A 22 322 22 HOH HOH . D 4 HOH A 23 323 6 HOH HOH . D 4 HOH A 24 324 159 HOH HOH . D 4 HOH A 25 325 146 HOH HOH . D 4 HOH A 26 326 10 HOH HOH . D 4 HOH A 27 327 96 HOH HOH . D 4 HOH A 28 328 12 HOH HOH . D 4 HOH A 29 329 81 HOH HOH . D 4 HOH A 30 330 1 HOH HOH . D 4 HOH A 31 331 62 HOH HOH . D 4 HOH A 32 332 151 HOH HOH . D 4 HOH A 33 333 25 HOH HOH . D 4 HOH A 34 334 9 HOH HOH . D 4 HOH A 35 335 33 HOH HOH . D 4 HOH A 36 336 21 HOH HOH . D 4 HOH A 37 337 40 HOH HOH . D 4 HOH A 38 338 77 HOH HOH . D 4 HOH A 39 339 15 HOH HOH . D 4 HOH A 40 340 42 HOH HOH . D 4 HOH A 41 341 58 HOH HOH . D 4 HOH A 42 342 158 HOH HOH . D 4 HOH A 43 343 27 HOH HOH . D 4 HOH A 44 344 94 HOH HOH . D 4 HOH A 45 345 115 HOH HOH . D 4 HOH A 46 346 74 HOH HOH . D 4 HOH A 47 347 39 HOH HOH . D 4 HOH A 48 348 49 HOH HOH . D 4 HOH A 49 349 139 HOH HOH . D 4 HOH A 50 350 83 HOH HOH . D 4 HOH A 51 351 61 HOH HOH . D 4 HOH A 52 352 67 HOH HOH . D 4 HOH A 53 353 112 HOH HOH . D 4 HOH A 54 354 164 HOH HOH . D 4 HOH A 55 355 106 HOH HOH . D 4 HOH A 56 356 149 HOH HOH . D 4 HOH A 57 357 20 HOH HOH . D 4 HOH A 58 358 76 HOH HOH . D 4 HOH A 59 359 91 HOH HOH . D 4 HOH A 60 360 5 HOH HOH . D 4 HOH A 61 361 2 HOH HOH . D 4 HOH A 62 362 117 HOH HOH . D 4 HOH A 63 363 31 HOH HOH . D 4 HOH A 64 364 127 HOH HOH . D 4 HOH A 65 365 110 HOH HOH . D 4 HOH A 66 366 7 HOH HOH . D 4 HOH A 67 367 92 HOH HOH . D 4 HOH A 68 368 38 HOH HOH . D 4 HOH A 69 369 133 HOH HOH . D 4 HOH A 70 370 71 HOH HOH . D 4 HOH A 71 371 23 HOH HOH . D 4 HOH A 72 372 165 HOH HOH . D 4 HOH A 73 373 93 HOH HOH . D 4 HOH A 74 374 46 HOH HOH . D 4 HOH A 75 375 8 HOH HOH . D 4 HOH A 76 376 135 HOH HOH . D 4 HOH A 77 377 13 HOH HOH . D 4 HOH A 78 378 101 HOH HOH . D 4 HOH A 79 379 122 HOH HOH . D 4 HOH A 80 380 54 HOH HOH . D 4 HOH A 81 381 24 HOH HOH . D 4 HOH A 82 382 65 HOH HOH . D 4 HOH A 83 383 11 HOH HOH . D 4 HOH A 84 384 169 HOH HOH . D 4 HOH A 85 385 4 HOH HOH . D 4 HOH A 86 386 175 HOH HOH . D 4 HOH A 87 387 88 HOH HOH . D 4 HOH A 88 388 41 HOH HOH . D 4 HOH A 89 389 53 HOH HOH . D 4 HOH A 90 390 98 HOH HOH . D 4 HOH A 91 391 75 HOH HOH . D 4 HOH A 92 392 28 HOH HOH . D 4 HOH A 93 393 57 HOH HOH . D 4 HOH A 94 394 45 HOH HOH . D 4 HOH A 95 395 137 HOH HOH . D 4 HOH A 96 396 99 HOH HOH . D 4 HOH A 97 397 17 HOH HOH . D 4 HOH A 98 398 30 HOH HOH . D 4 HOH A 99 399 36 HOH HOH . D 4 HOH A 100 400 118 HOH HOH . D 4 HOH A 101 401 129 HOH HOH . D 4 HOH A 102 402 138 HOH HOH . D 4 HOH A 103 403 29 HOH HOH . D 4 HOH A 104 404 87 HOH HOH . D 4 HOH A 105 405 63 HOH HOH . D 4 HOH A 106 406 141 HOH HOH . D 4 HOH A 107 407 162 HOH HOH . D 4 HOH A 108 408 85 HOH HOH . D 4 HOH A 109 409 179 HOH HOH . D 4 HOH A 110 410 16 HOH HOH . D 4 HOH A 111 411 103 HOH HOH . D 4 HOH A 112 412 104 HOH HOH . D 4 HOH A 113 413 125 HOH HOH . D 4 HOH A 114 414 105 HOH HOH . D 4 HOH A 115 415 18 HOH HOH . D 4 HOH A 116 416 126 HOH HOH . D 4 HOH A 117 417 32 HOH HOH . D 4 HOH A 118 418 148 HOH HOH . D 4 HOH A 119 419 14 HOH HOH . D 4 HOH A 120 420 108 HOH HOH . D 4 HOH A 121 421 66 HOH HOH . D 4 HOH A 122 422 170 HOH HOH . D 4 HOH A 123 423 35 HOH HOH . D 4 HOH A 124 424 132 HOH HOH . D 4 HOH A 125 425 80 HOH HOH . D 4 HOH A 126 426 155 HOH HOH . D 4 HOH A 127 427 119 HOH HOH . D 4 HOH A 128 428 69 HOH HOH . D 4 HOH A 129 429 152 HOH HOH . D 4 HOH A 130 430 102 HOH HOH . D 4 HOH A 131 431 113 HOH HOH . D 4 HOH A 132 432 97 HOH HOH . D 4 HOH A 133 433 44 HOH HOH . D 4 HOH A 134 434 50 HOH HOH . D 4 HOH A 135 435 47 HOH HOH . D 4 HOH A 136 436 56 HOH HOH . D 4 HOH A 137 437 174 HOH HOH . D 4 HOH A 138 438 160 HOH HOH . D 4 HOH A 139 439 64 HOH HOH . D 4 HOH A 140 440 72 HOH HOH . D 4 HOH A 141 441 143 HOH HOH . D 4 HOH A 142 442 37 HOH HOH . D 4 HOH A 143 443 171 HOH HOH . D 4 HOH A 144 444 100 HOH HOH . D 4 HOH A 145 445 167 HOH HOH . D 4 HOH A 146 446 73 HOH HOH . D 4 HOH A 147 447 154 HOH HOH . D 4 HOH A 148 448 180 HOH HOH . D 4 HOH A 149 449 157 HOH HOH . D 4 HOH A 150 450 181 HOH HOH . D 4 HOH A 151 451 161 HOH HOH . D 4 HOH A 152 452 60 HOH HOH . D 4 HOH A 153 453 116 HOH HOH . D 4 HOH A 154 454 172 HOH HOH . D 4 HOH A 155 455 130 HOH HOH . D 4 HOH A 156 456 109 HOH HOH . D 4 HOH A 157 457 111 HOH HOH . D 4 HOH A 158 458 153 HOH HOH . D 4 HOH A 159 459 150 HOH HOH . D 4 HOH A 160 460 173 HOH HOH . D 4 HOH A 161 461 26 HOH HOH . D 4 HOH A 162 462 89 HOH HOH . D 4 HOH A 163 463 142 HOH HOH . D 4 HOH A 164 464 90 HOH HOH . D 4 HOH A 165 465 52 HOH HOH . D 4 HOH A 166 466 136 HOH HOH . D 4 HOH A 167 467 176 HOH HOH . D 4 HOH A 168 468 79 HOH HOH . D 4 HOH A 169 469 121 HOH HOH . D 4 HOH A 170 470 55 HOH HOH . D 4 HOH A 171 471 82 HOH HOH . D 4 HOH A 172 472 144 HOH HOH . D 4 HOH A 173 473 178 HOH HOH . D 4 HOH A 174 474 86 HOH HOH . D 4 HOH A 175 475 114 HOH HOH . D 4 HOH A 176 476 95 HOH HOH . D 4 HOH A 177 477 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O6 BU3 . . . C 3 14.67 -7.591 -3.286 0.88 33.46 ? O6 BU3 202 A 1 HETATM 2 C C3 BU3 . . . C 3 13.712 -8.171 -2.4 0.88 35.61 ? C3 BU3 202 A 1 HETATM 3 C C4 BU3 . . . C 3 12.637 -7.16 -2.061 0.88 33.27 ? C4 BU3 202 A 1 HETATM 4 C C2 BU3 . . . C 3 14.443 -8.528 -1.108 0.88 37.63 ? C2 BU3 202 A 1 HETATM 5 O O5 BU3 . . . C 3 14.754 -7.296 -0.46 0.88 45.03 ? O5 BU3 202 A 1 HETATM 6 C C1 BU3 . . . C 3 15.693 -9.358 -1.321 0.88 43.28 ? C1 BU3 202 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #