data_6SBI
#
_model_server_result.job_id            nBN3bBB51PfxtwpbfIo3NQ 
_model_server_result.datetime_utc      '2025-07-31 00:18:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6sbi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":301}' 
#
_entry.id    6SBI 
#
_exptl.entry_id    6SBI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.21 
_cell.angle_gamma         90 
_cell.entry_id            6SBI 
_cell.length_a            52.603 
_cell.length_b            103.348 
_cell.length_c            86.597 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6SBI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 software_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,K,L,M,N,X,Y 1 1 
C,D,O,P,Q,R,S,T,U,V,W,Z,AA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 K N N 
? 2 O N N 
? 2 U N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O LYS 59 A LYS 21 1_555 F K K . A K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.081 ? 
metalc ? metalc2 A OD1 ASN 60 A ASN 22 1_555 F K K . A K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.169 ? 
metalc ? metalc3 A OE1 GLU 112 A GLU 74 1_555 E MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? 
metalc ? metalc4 A OE2 GLU 114 A GLU 76 1_555 E MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
metalc ? metalc5 A OD2 ASP 143 A ASP 105 1_555 E MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
metalc ? metalc6 E MG MG . A MG 301 1_555 J O1 OXL . A OXL 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
metalc ? metalc7 E MG MG . A MG 301 1_555 J O2 OXL . A OXL 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
metalc ? metalc8 E MG MG . A MG 301 1_555 X O HOH . A HOH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
metalc ? metalc9 F K K . A K 302 1_555 X O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.819 ? 
metalc ? metalc10 F K K . A K 302 1_555 B O LYS 59 B LYS 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.805 ? 
metalc ? metalc11 F K K . A K 302 1_555 B OD1 ASN 60 B ASN 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.061 ? 
metalc ? metalc12 F K K . A K 302 1_555 Y O HOH . B HOH 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.09 ? 
metalc ? metalc13 B OE1 GLU 112 B GLU 74 1_555 K MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
metalc ? metalc14 B OE2 GLU 114 B GLU 76 1_555 K MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
metalc ? metalc15 B OD2 ASP 143 B ASP 105 1_555 K MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc16 K MG MG . B MG 301 1_555 N O4 OXL . B OXL 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? 
metalc ? metalc17 K MG MG . B MG 301 1_555 N O3 OXL . B OXL 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? 
metalc ? metalc18 K MG MG . B MG 301 1_555 Y O HOH . B HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.834 ? 
metalc ? metalc19 C O LYS 59 C LYS 21 1_555 P K K . C K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.808 ? 
metalc ? metalc20 C OD1 ASN 60 C ASN 22 1_555 P K K . C K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.987 ? 
metalc ? metalc21 C OE1 GLU 112 C GLU 74 1_555 O MG MG . C MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
metalc ? metalc22 C OE2 GLU 114 C GLU 76 1_555 O MG MG . C MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? 
metalc ? metalc23 C OD2 ASP 143 C ASP 105 1_555 O MG MG . C MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
metalc ? metalc24 O MG MG . C MG 301 1_555 T O3 OXL . C OXL 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
metalc ? metalc25 O MG MG . C MG 301 1_555 T O4 OXL . C OXL 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
metalc ? metalc26 O MG MG . C MG 301 1_555 Z O HOH . C HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
metalc ? metalc27 P K K . C K 302 1_555 Z O HOH . C HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.765 ? 
metalc ? metalc28 P K K . C K 302 1_555 D O LYS 59 D LYS 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.062 ? 
metalc ? metalc29 P K K . C K 302 1_555 D OD1 ASN 60 D ASN 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.205 ? 
metalc ? metalc30 P K K . C K 302 1_555 AA O HOH . D HOH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.65 ? 
metalc ? metalc31 D OE1 GLU 112 D GLU 74 1_555 U MG MG . D MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? 
metalc ? metalc32 D OE2 GLU 114 D GLU 76 1_555 U MG MG . D MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? 
metalc ? metalc33 D OD2 ASP 143 D ASP 105 1_555 U MG MG . D MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
metalc ? metalc34 U MG MG . D MG 301 1_555 W O2 OXL . D OXL 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
metalc ? metalc35 U MG MG . D MG 301 1_555 W O3 OXL . D OXL 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? 
metalc ? metalc36 U MG MG . D MG 301 1_555 AA O HOH . D HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.897 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6SBI 
_atom_sites.fract_transf_matrix[1][1]    0.01901 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000071 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009676 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011548 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 MG A 1 301 3 MG MG . 
F 3 K A 1 302 6 K K . 
G 4 CL A 1 303 2 CL CL . 
H 4 CL A 1 304 3 CL CL . 
I 4 CL A 1 305 7 CL CL . 
J 5 OXL A 1 306 1 OXL OXL . 
K 2 MG B 1 301 2 MG MG . 
L 4 CL B 1 302 5 CL CL . 
M 4 CL B 1 303 6 CL CL . 
N 5 OXL B 1 304 3 OXL OXL . 
O 2 MG C 1 301 1 MG MG . 
P 3 K C 1 302 5 K K . 
Q 4 CL C 1 303 4 CL CL . 
R 4 CL C 1 304 8 CL CL . 
S 4 CL C 1 305 9 CL CL . 
T 5 OXL C 1 306 4 OXL OXL . 
U 2 MG D 1 301 4 MG MG . 
V 4 CL D 1 302 1 CL CL . 
W 5 OXL D 1 303 2 OXL OXL . 
X 6 HOH A 1 401 9 HOH HOH . 
X 6 HOH A 2 402 7 HOH HOH . 
X 6 HOH A 3 403 18 HOH HOH . 
X 6 HOH A 4 404 1 HOH HOH . 
X 6 HOH A 5 405 12 HOH HOH . 
X 6 HOH A 6 406 19 HOH HOH . 
X 6 HOH A 7 407 29 HOH HOH . 
X 6 HOH A 8 408 21 HOH HOH . 
Y 6 HOH B 1 401 14 HOH HOH . 
Y 6 HOH B 2 402 36 HOH HOH . 
Y 6 HOH B 3 403 35 HOH HOH . 
Y 6 HOH B 4 404 10 HOH HOH . 
Y 6 HOH B 5 405 3 HOH HOH . 
Y 6 HOH B 6 406 28 HOH HOH . 
Y 6 HOH B 7 407 33 HOH HOH . 
Y 6 HOH B 8 408 34 HOH HOH . 
Y 6 HOH B 9 409 32 HOH HOH . 
Y 6 HOH B 10 410 27 HOH HOH . 
Y 6 HOH B 11 411 22 HOH HOH . 
Y 6 HOH B 12 412 8 HOH HOH . 
Z 6 HOH C 1 401 4 HOH HOH . 
Z 6 HOH C 2 402 17 HOH HOH . 
Z 6 HOH C 3 403 15 HOH HOH . 
Z 6 HOH C 4 404 20 HOH HOH . 
Z 6 HOH C 5 405 5 HOH HOH . 
Z 6 HOH C 6 406 24 HOH HOH . 
AA 6 HOH D 1 401 16 HOH HOH . 
AA 6 HOH D 2 402 11 HOH HOH . 
AA 6 HOH D 3 403 2 HOH HOH . 
AA 6 HOH D 4 404 6 HOH HOH . 
AA 6 HOH D 5 405 25 HOH HOH . 
AA 6 HOH D 6 406 31 HOH HOH . 
AA 6 HOH D 7 407 30 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               16.793 
_atom_site.Cartn_y               4.393 
_atom_site.Cartn_z               30.654 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        20.48 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           301 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              29 
_model_server_stats.parse_time_ms           43 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           447 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#