data_6SBU
#
_model_server_result.job_id            tUs1PiDNYzU7uvN14eI3eQ 
_model_server_result.datetime_utc      '2024-11-13 06:22:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6sbu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":1001}' 
#
_entry.id    6SBU 
#
_exptl.entry_id    6SBU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              440.856 
_entity.id                          2 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-[[4-[(5-chloranylthiophen-2-yl)carbonylamino]-1,3-bis(oxidanylidene)isoindol-2-yl]methyl]benzoic acid' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6SBU 
_cell.length_a            78.445 
_cell.length_b            143.853 
_cell.length_c            311.225 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6SBU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,I,J,K,L,M,S,T,U,V 1 1 
E,F,G,H,N,O,P,Q,R,W,X,Y,Z 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 I N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 P N N 
? 2 Q N N 
? 2 R N N 
#
_chem_comp.formula           'C21 H13 Cl N2 O5 S' 
_chem_comp.formula_weight    440.856 
_chem_comp.id                L5N 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-[[4-[(5-chloranylthiophen-2-yl)carbonylamino]-1,3-bis(oxidanylidene)isoindol-2-yl]methyl]benzoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OAK CAE L5N doub 173 n n 
CAF CAB L5N doub 174 n y 
CAF CAL L5N sing 175 n y 
CAE CAB L5N sing 176 n n 
CAE NAI L5N sing 177 n n 
CAB CAA L5N sing 178 n y 
CAL CAH L5N doub 179 n y 
CAN NAI L5N sing 180 n n 
CAN CAQ L5N sing 181 n n 
NAI CAD L5N sing 182 n n 
CAA CAD L5N sing 183 n n 
CAA CAC L5N doub 184 n y 
CAH CAC L5N sing 185 n y 
CAD OAJ L5N doub 186 n n 
CAC NAG L5N sing 187 n n 
CAQ CAU L5N doub 188 n y 
CAQ CAT L5N sing 189 n y 
CAU CAY L5N sing 190 n y 
NAG CAM L5N sing 191 n n 
CAT CAX L5N doub 192 n y 
OAP CAM L5N doub 193 n n 
CAM CAO L5N sing 194 n n 
CAY CBA L5N doub 195 n y 
CAX CBA L5N sing 196 n y 
CAO CAS L5N doub 197 n y 
CAO SAR L5N sing 198 n y 
CBA CBB L5N sing 199 n n 
CAS CAW L5N sing 200 n y 
SAR CAV L5N sing 201 n y 
OBD CBB L5N doub 202 n n 
CAW CAV L5N doub 203 n y 
CBB OBC L5N sing 204 n n 
CAV CLA L5N sing 205 n n 
CAT H1 L5N sing 206 n n 
CAX H2 L5N sing 207 n n 
OBC H3 L5N sing 208 n n 
CAY H4 L5N sing 209 n n 
CAU H5 L5N sing 210 n n 
CAN H6 L5N sing 211 n n 
CAN H7 L5N sing 212 n n 
CAF H8 L5N sing 213 n n 
CAL H9 L5N sing 214 n n 
CAH H10 L5N sing 215 n n 
NAG H11 L5N sing 216 n n 
CAS H12 L5N sing 217 n n 
CAW H13 L5N sing 218 n n 
#
_atom_sites.entry_id                     6SBU 
_atom_sites.fract_transf_matrix[1][1]    0.012748 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006952 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003213 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 L5N A 1 1001 1001 L5N LIG . 
J 3 NAI A 1 1002 1002 NAI NAI . 
K 2 L5N B 1 1001 1001 L5N LIG . 
L 2 L5N C 1 1001 1001 L5N LIG . 
M 2 L5N D 1 1001 1001 L5N LIG . 
N 2 L5N E 1 1001 1001 L5N LIG . 
O 3 NAI E 1 1002 1002 NAI NAI . 
P 2 L5N F 1 1001 1001 L5N LIG . 
Q 2 L5N G 1 1001 1001 L5N LIG . 
R 2 L5N H 1 1001 1001 L5N LIG . 
S 4 HOH A 1 1101 83 HOH HOH . 
S 4 HOH A 2 1102 63 HOH HOH . 
S 4 HOH A 3 1103 60 HOH HOH . 
S 4 HOH A 4 1104 73 HOH HOH . 
S 4 HOH A 5 1105 4 HOH HOH . 
S 4 HOH A 6 1106 72 HOH HOH . 
S 4 HOH A 7 1107 5 HOH HOH . 
S 4 HOH A 8 1108 74 HOH HOH . 
S 4 HOH A 9 1109 19 HOH HOH . 
S 4 HOH A 10 1110 26 HOH HOH . 
T 4 HOH B 1 1101 6 HOH HOH . 
T 4 HOH B 2 1102 69 HOH HOH . 
T 4 HOH B 3 1103 1 HOH HOH . 
T 4 HOH B 4 1104 49 HOH HOH . 
T 4 HOH B 5 1105 88 HOH HOH . 
T 4 HOH B 6 1106 9 HOH HOH . 
T 4 HOH B 7 1107 65 HOH HOH . 
T 4 HOH B 8 1108 2 HOH HOH . 
T 4 HOH B 9 1109 37 HOH HOH . 
T 4 HOH B 10 1110 58 HOH HOH . 
T 4 HOH B 11 1111 20 HOH HOH . 
T 4 HOH B 12 1112 35 HOH HOH . 
T 4 HOH B 13 1113 28 HOH HOH . 
T 4 HOH B 14 1114 50 HOH HOH . 
T 4 HOH B 15 1115 51 HOH HOH . 
U 4 HOH C 1 1101 93 HOH HOH . 
U 4 HOH C 2 1102 25 HOH HOH . 
U 4 HOH C 3 1103 81 HOH HOH . 
U 4 HOH C 4 1104 24 HOH HOH . 
U 4 HOH C 5 1105 38 HOH HOH . 
U 4 HOH C 6 1106 8 HOH HOH . 
U 4 HOH C 7 1107 54 HOH HOH . 
U 4 HOH C 8 1108 82 HOH HOH . 
U 4 HOH C 9 1109 31 HOH HOH . 
U 4 HOH C 10 1110 10 HOH HOH . 
U 4 HOH C 11 1111 11 HOH HOH . 
U 4 HOH C 12 1112 30 HOH HOH . 
U 4 HOH C 13 1113 21 HOH HOH . 
U 4 HOH C 14 1114 70 HOH HOH . 
V 4 HOH D 1 1101 13 HOH HOH . 
V 4 HOH D 2 1102 84 HOH HOH . 
V 4 HOH D 3 1103 78 HOH HOH . 
V 4 HOH D 4 1104 12 HOH HOH . 
V 4 HOH D 5 1105 42 HOH HOH . 
V 4 HOH D 6 1106 14 HOH HOH . 
V 4 HOH D 7 1107 27 HOH HOH . 
V 4 HOH D 8 1108 3 HOH HOH . 
V 4 HOH D 9 1109 41 HOH HOH . 
W 4 HOH E 1 1101 94 HOH HOH . 
W 4 HOH E 2 1102 66 HOH HOH . 
W 4 HOH E 3 1103 77 HOH HOH . 
W 4 HOH E 4 1104 52 HOH HOH . 
W 4 HOH E 5 1105 92 HOH HOH . 
W 4 HOH E 6 1106 7 HOH HOH . 
W 4 HOH E 7 1107 55 HOH HOH . 
W 4 HOH E 8 1108 43 HOH HOH . 
W 4 HOH E 9 1109 71 HOH HOH . 
W 4 HOH E 10 1110 59 HOH HOH . 
W 4 HOH E 11 1111 23 HOH HOH . 
W 4 HOH E 12 1112 29 HOH HOH . 
W 4 HOH E 13 1113 56 HOH HOH . 
W 4 HOH E 14 1114 44 HOH HOH . 
W 4 HOH E 15 1115 89 HOH HOH . 
W 4 HOH E 16 1116 57 HOH HOH . 
W 4 HOH E 17 1117 45 HOH HOH . 
X 4 HOH F 1 1101 67 HOH HOH . 
X 4 HOH F 2 1102 85 HOH HOH . 
X 4 HOH F 3 1103 36 HOH HOH . 
X 4 HOH F 4 1104 61 HOH HOH . 
Y 4 HOH G 1 1101 40 HOH HOH . 
Y 4 HOH G 2 1102 86 HOH HOH . 
Y 4 HOH G 3 1103 34 HOH HOH . 
Y 4 HOH G 4 1104 46 HOH HOH . 
Y 4 HOH G 5 1105 80 HOH HOH . 
Y 4 HOH G 6 1106 79 HOH HOH . 
Y 4 HOH G 7 1107 32 HOH HOH . 
Y 4 HOH G 8 1108 15 HOH HOH . 
Y 4 HOH G 9 1109 76 HOH HOH . 
Y 4 HOH G 10 1110 16 HOH HOH . 
Y 4 HOH G 11 1111 33 HOH HOH . 
Z 4 HOH H 1 1101 68 HOH HOH . 
Z 4 HOH H 2 1102 53 HOH HOH . 
Z 4 HOH H 3 1103 17 HOH HOH . 
Z 4 HOH H 4 1104 91 HOH HOH . 
Z 4 HOH H 5 1105 75 HOH HOH . 
Z 4 HOH H 6 1106 18 HOH HOH . 
Z 4 HOH H 7 1107 62 HOH HOH . 
Z 4 HOH H 8 1108 87 HOH HOH . 
Z 4 HOH H 9 1109 48 HOH HOH . 
Z 4 HOH H 10 1110 22 HOH HOH . 
Z 4 HOH H 11 1111 39 HOH HOH . 
Z 4 HOH H 12 1112 47 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAT L5N . . . L 2 56.769 148.143 5.768 1 60.24 ? CAT L5N 1001 C 1 
HETATM 2 C CAX L5N . . . L 2 57.237 147.548 4.603 1 60.29 ? CAX L5N 1001 C 1 
HETATM 3 C CBA L5N . . . L 2 56.726 146.315 4.237 1 60.27 ? CBA L5N 1001 C 1 
HETATM 4 C CBB L5N . . . L 2 57.192 145.633 2.984 1 64.64 ? CBB L5N 1001 C 1 
HETATM 5 O OBD L5N . . . L 2 57.845 146.303 2.137 1 73.82 ? OBD L5N 1001 C 1 
HETATM 6 O OBC L5N . . . L 2 56.846 144.438 2.879 1 59.47 ? OBC L5N 1001 C 1 
HETATM 7 C CAY L5N . . . L 2 55.748 145.695 4.988 1 58.63 ? CAY L5N 1001 C 1 
HETATM 8 C CAU L5N . . . L 2 55.285 146.294 6.138 1 57.82 ? CAU L5N 1001 C 1 
HETATM 9 C CAQ L5N . . . L 2 55.789 147.523 6.527 1 58.65 ? CAQ L5N 1001 C 1 
HETATM 10 C CAN L5N . . . L 2 55.293 148.18 7.828 1 62.05 ? CAN L5N 1001 C 1 
HETATM 11 N NAI L5N . . . L 2 53.954 148.789 7.744 1 59.04 ? NAI L5N 1001 C 1 
HETATM 12 C CAE L5N . . . L 2 52.825 148.331 8.276 1 56.12 ? CAE L5N 1001 C 1 
HETATM 13 O OAK L5N . . . L 2 52.693 147.281 8.909 1 54.78 ? OAK L5N 1001 C 1 
HETATM 14 C CAD L5N . . . L 2 53.714 149.923 7.117 1 60.08 ? CAD L5N 1001 C 1 
HETATM 15 O OAJ L5N . . . L 2 54.539 150.609 6.517 1 67.38 ? OAJ L5N 1001 C 1 
HETATM 16 C CAA L5N . . . L 2 52.386 150.239 7.222 1 55.73 ? CAA L5N 1001 C 1 
HETATM 17 C CAB L5N . . . L 2 51.812 149.224 7.958 1 56.59 ? CAB L5N 1001 C 1 
HETATM 18 C CAF L5N . . . L 2 50.448 149.281 8.206 1 59.85 ? CAF L5N 1001 C 1 
HETATM 19 C CAL L5N . . . L 2 49.69 150.354 7.719 1 55.59 ? CAL L5N 1001 C 1 
HETATM 20 C CAH L5N . . . L 2 50.287 151.377 7.002 1 53.21 ? CAH L5N 1001 C 1 
HETATM 21 C CAC L5N . . . L 2 51.656 151.307 6.745 1 54.17 ? CAC L5N 1001 C 1 
HETATM 22 N NAG L5N . . . L 2 52.324 152.226 6.069 1 53.93 ? NAG L5N 1001 C 1 
HETATM 23 C CAM L5N . . . L 2 51.753 153.296 5.522 1 59.44 ? CAM L5N 1001 C 1 
HETATM 24 O OAP L5N . . . L 2 50.537 153.503 5.461 1 57.16 ? OAP L5N 1001 C 1 
HETATM 25 C CAO L5N . . . L 2 52.739 154.18 4.761 1 65.1 ? CAO L5N 1001 C 1 
HETATM 26 C CAS L5N . . . L 2 54.003 153.835 4.493 1 68.93 ? CAS L5N 1001 C 1 
HETATM 27 C CAW L5N . . . L 2 54.692 154.733 3.792 1 71.04 ? CAW L5N 1001 C 1 
HETATM 28 C CAV L5N . . . L 2 53.95 155.785 3.495 1 74.47 ? CAV L5N 1001 C 1 
HETATM 29 CL CLA L5N . . . L 2 54.509 157.123 2.598 1 118.35 ? CLA L5N 1001 C 1 
HETATM 30 S SAR L5N . . . L 2 52.424 155.656 4.084 1 65.01 ? SAR L5N 1001 C 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    37 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           30 
#